prot_P-canaliculata_contig94287.23450.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig94287.23450.1
Unique Nameprot_P-canaliculata_contig94287.23450.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length172
Homology
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: A0A0U2L3X4_9CHLO (LAGLIDADG_2 domain-containing protein n=4 Tax=Ulva TaxID=3118 RepID=A0A0U2L3X4_9CHLO)

HSP 1 Score: 278 bits (710), Expect = 8.330e-94
Identity = 134/154 (87.01%), Postives = 145/154 (94.16%), Query Frame = 0
Query:   18 MTQLESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMNTGKLKKKLVLIDDQLHLVDI 171
            MTQLESQW+VGFVDGEGCFFIG+NKN EM LGFQVLPEFCVVQH+RD+QIL ALK FWGFGVVRKNHGDRLCYRVRGIT+LNKTIIPFFEKH LKTKKKIDFLKFRKV+QLIE KQHLTI+GLLEIDAIRL+MNTGK KKKL+LID +L L+DI
Sbjct:    1 MTQLESQWVVGFVDGEGCFFIGLNKNPEMTLGFQVLPEFCVVQHRRDEQILYALKKFWGFGVVRKNHGDRLCYRVRGITNLNKTIIPFFEKHSLKTKKKIDFLKFRKVLQLIENKQHLTIQGLLEIDAIRLEMNTGKSKKKLILIDGKLDLIDI 154          
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: A0A6J4B0C9_9CHLO (LAGLIDADG_2 domain-containing protein n=4 Tax=Ulva TaxID=3118 RepID=A0A6J4B0C9_9CHLO)

HSP 1 Score: 268 bits (685), Expect = 5.380e-90
Identity = 130/154 (84.42%), Postives = 139/154 (90.26%), Query Frame = 0
Query:   18 MTQLESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMNTGKLKKKLVLIDDQLHLVDI 171
            MTQLESQWIVGFVDGEGCFFIG+NKN EM LG QVLPEFCVVQHKRD+QIL ALK FW FGVVRKNHGDRLCYRVRG+ HLNKTIIPFFEKH LKTKKKIDFLKFRK++QLIE K+HLT+EGLL+ID  RL+MNT K KKKLVLID QL LVDI
Sbjct:    1 MTQLESQWIVGFVDGEGCFFIGLNKNPEMPLGIQVLPEFCVVQHKRDEQILYALKNFWQFGVVRKNHGDRLCYRVRGVEHLNKTIIPFFEKHSLKTKKKIDFLKFRKILQLIENKEHLTVEGLLKIDGFRLEMNTRKSKKKLVLIDGQLDLVDI 154          
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: A0A1W6EGM9_PSEMR (Putative LAGLIDADG homing endonuclease n=1 Tax=Pseudoneochloris marina TaxID=44573 RepID=A0A1W6EGM9_PSEMR)

HSP 1 Score: 234 bits (596), Expect = 2.900e-76
Identity = 112/152 (73.68%), Postives = 131/152 (86.18%), Query Frame = 0
Query:   18 MTQLESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMNTG---KLKKKLVLIDDQL 166
            MTQLESQWI GFVDGEGCFF+GINKNS+M  GFQVLPEF +VQHK D+QIL ALK+FWGFGVVRKN+GDR CYRVR  THL   IIPFFEKH LKTKK +DFLKFRK++ +IE+KQHLT+EGLL+ID+IRL+MN     K +KKL+L+DD+L
Sbjct:    1 MTQLESQWITGFVDGEGCFFVGINKNSKMTTGFQVLPEFVIVQHKDDEQILHALKSFWGFGVVRKNNGDRQCYRVRSFTHLQNKIIPFFEKHKLKTKKNLDFLKFRKILLMIERKQHLTVEGLLKIDSIRLQMNQSDSKKPRKKLLLVDDKL 152          
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: A0A1B2RYR2_9CHLO (Putative LAGLIDADG homing endonuclease n=1 Tax=Rhexinema sarcinoideum TaxID=43261 RepID=A0A1B2RYR2_9CHLO)

HSP 1 Score: 222 bits (565), Expect = 1.420e-71
Identity = 105/151 (69.54%), Postives = 131/151 (86.75%), Query Frame = 0
Query:   18 MTQLESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMNTG--KLKKKLVLIDDQL 166
            MT+LE QWIVGFVDGEGCFF+GIN+   M  GFQVLPEF V QH+RD+ IL ALK +WGFGVVRKNHGDRLCYRVRG+ +L K+I+PFFEKH LKTKKKIDFLKFRK+++LIE  +HLT+EGLL+I+++R++MNTG  K +K+L LI+++L
Sbjct:    1 MTKLEVQWIVGFVDGEGCFFVGINEQPSMTTGFQVLPEFVVTQHQRDESILYALKEYWGFGVVRKNHGDRLCYRVRGLENLLKSIVPFFEKHSLKTKKKIDFLKFRKILKLIENHEHLTVEGLLKIESLRVEMNTGLTKPRKRLRLIENKL 151          
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: A0A2J0LN02_9BACT (LAGLIDADG_2 domain-containing protein (Fragment) n=1 Tax=Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_0_65_50_5 TaxID=1974754 RepID=A0A2J0LN02_9BACT)

HSP 1 Score: 185 bits (470), Expect = 3.730e-57
Identity = 86/135 (63.70%), Postives = 110/135 (81.48%), Query Frame = 0
Query:   19 TQLESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMNTG 153
            + LE+QW+VGFVDGEGCF+IGIN + EM +GFQVLPEF VVQHK+D QIL ALK+F+G GV+R NHGDR+ YRVRG  HL   IIPFFE+H LKTKKK+DFLKFRKV+ +++ ++HL ++G+ +I  I  +MN G
Sbjct:   14 SHLEAQWVVGFVDGEGCFYIGINPHPEMSIGFQVLPEFTVVQHKKDIQILYALKSFFGCGVIRINHGDRMAYRVRGFDHLIDRIIPFFEEHSLKTKKKLDFLKFRKVLLMMKNQEHLKLDGIEKIKMIASQMNRG 148          
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: H5SF27_9CHLR (Homing endonuclease n=1 Tax=uncultured Chloroflexi bacterium TaxID=166587 RepID=H5SF27_9CHLR)

HSP 1 Score: 184 bits (468), Expect = 6.600e-57
Identity = 85/136 (62.50%), Postives = 111/136 (81.62%), Query Frame = 0
Query:   19 TQLESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMNTGK 154
            ++LE+QW+VGFVDGEGCF++GIN + EMK GFQVLPEF VVQHK+D Q+L ALK F+G GVVR+NHGDR+ YRV  + HL + IIPFFEKH LKTKK++DFLKFRK++ ++ + +HLT EG+ +I  I  +MN G+
Sbjct:   21 SRLEAQWVVGFVDGEGCFYVGINPHPEMKSGFQVLPEFTVVQHKQDVQVLYALKRFFGCGVVRQNHGDRMAYRVSRVEHLWERIIPFFEKHPLKTKKRLDFLKFRKILMMMRRDEHLTPEGIEKIRQIASQMNRGR 156          
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: A0A097KMH0_9CHLO (Putative LAGLIDADG homing endonuclease n=1 Tax=Xylochloris irregularis TaxID=480381 RepID=A0A097KMH0_9CHLO)

HSP 1 Score: 184 bits (466), Expect = 6.060e-56
Identity = 92/136 (67.65%), Postives = 107/136 (78.68%), Query Frame = 0
Query:   16 IIMTQLESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMN 151
            I +  LE QWIVGFVDGEGCFF+GIN N EMK G QVLPEF VVQHKRD QIL ALK  +G GVVR NHGDR  YRVRG  +L++ IIPFFEKH LKTKK+IDF KFR V++L++K+ HLT+EG+ EI  I  +MN
Sbjct:   62 ITLMNLEPQWIVGFVDGEGCFFVGINTNVEMKTGKQVLPEFTVVQHKRDIQILYALKQHFGCGVVRTNHGDRYGYRVRGHKNLSERIIPFFEKHKLKTKKRIDFEKFRDVVRLMDKRAHLTLEGIAEIQKIANQMN 197          
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: A0A097KMY6_9CHLO (Putative LAGLIDADG homing endonuclease n=1 Tax=Koliella corcontica TaxID=155904 RepID=A0A097KMY6_9CHLO)

HSP 1 Score: 181 bits (458), Expect = 1.270e-55
Identity = 86/134 (64.18%), Postives = 105/134 (78.36%), Query Frame = 0
Query:   19 TQLESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMNT 152
            T L ++WIVGFVDGEGCF I INKN+ MKLG+Q LPEF VVQH+ D QIL ALK FW  GVVRKNHG+R+CYRVR + HL   IIPFFEKH LKTKK+I F +FR  + L+EKK+HLT+EGL ++  +R  +N+
Sbjct:    3 TILNAEWIVGFVDGEGCFHIDINKNNLMKLGYQALPEFTVVQHESDVQILNALKAFWKCGVVRKNHGNRMCYRVRNLNHLQTIIIPFFEKHKLKTKKRISFERFRSAVLLMEKKEHLTLEGLDKLRKLREGINS 136          
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: A0A0G0YSD4_9BACT (LAGLIDADG homing endonuclease n=1 Tax=Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15 TaxID=1618677 RepID=A0A0G0YSD4_9BACT)

HSP 1 Score: 177 bits (450), Expect = 1.950e-54
Identity = 85/131 (64.89%), Postives = 104/131 (79.39%), Query Frame = 0
Query:   21 LESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMN 151
            LESQWIVGFVDGEGCF + IN + EM +G+QVLPEF VVQHKRD Q+L ALK ++G GVVR NHGDR+CYRVR I +L K IIPFF KH LKTKK +DF KFR+++ +++  +HLT EG+ EI AI  +MN
Sbjct:    3 LESQWIVGFVDGEGCFHVSINIHKEMTIGYQVLPEFTVVQHKRDVQVLYALKEYFGCGVVRTNHGDRMCYRVRSIDNLLKNIIPFFVKHTLKTKKNVDFAKFRQILLMMQDNKHLTSEGIEEIRAIANQMN 133          
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Match: Q8WKZ3_9CHLO (LAGLIDADG_2 domain-containing protein n=2 Tax=Pedinomonas tuberculata TaxID=160064 RepID=Q8WKZ3_9CHLO)

HSP 1 Score: 176 bits (446), Expect = 9.590e-54
Identity = 87/137 (63.50%), Postives = 105/137 (76.64%), Query Frame = 0
Query:   21 LESQWIVGFVDGEGCFFIGINKNSEMKLGFQVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNKTIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKMNTGKLKK 157
            LE+QWIVGFVDGEGCF I IN N EMKLG QVL EF VVQH+ D+QIL+ALK FWG GVVRKN+ D LCYRVR +  L   I+PFFEKH LKT+K+IDF  FR VI L++++ HLT+EG+ +I+ IR  MN   + K
Sbjct:    3 LEAQWIVGFVDGEGCFHIAINSNQEMKLGVQVLAEFVVVQHESDRQILEALKAFWGCGVVRKNNKDCLCYRVRDLEQLKTRIVPFFEKHKLKTRKRIDFDTFRDVIALMDQQAHLTLEGVEKINQIRKTMNRKGISK 139          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig94287.23450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U2L3X4_9CHLO8.330e-9487.01LAGLIDADG_2 domain-containing protein n=4 Tax=Ulva... [more]
A0A6J4B0C9_9CHLO5.380e-9084.42LAGLIDADG_2 domain-containing protein n=4 Tax=Ulva... [more]
A0A1W6EGM9_PSEMR2.900e-7673.68Putative LAGLIDADG homing endonuclease n=1 Tax=Pse... [more]
A0A1B2RYR2_9CHLO1.420e-7169.54Putative LAGLIDADG homing endonuclease n=1 Tax=Rhe... [more]
A0A2J0LN02_9BACT3.730e-5763.70LAGLIDADG_2 domain-containing protein (Fragment) n... [more]
H5SF27_9CHLR6.600e-5762.50Homing endonuclease n=1 Tax=uncultured Chloroflexi... [more]
A0A097KMH0_9CHLO6.060e-5667.65Putative LAGLIDADG homing endonuclease n=1 Tax=Xyl... [more]
A0A097KMY6_9CHLO1.270e-5564.18Putative LAGLIDADG homing endonuclease n=1 Tax=Kol... [more]
A0A0G0YSD4_9BACT1.950e-5464.89LAGLIDADG homing endonuclease n=1 Tax=Candidatus K... [more]
Q8WKZ3_9CHLO9.590e-5463.50LAGLIDADG_2 domain-containing protein n=2 Tax=Pedi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004860Homing endonuclease, LAGLIDADGPFAMPF00961LAGLIDADG_1coord: 26..125
e-value: 3.9E-25
score: 88.8
IPR027434Homing endonucleaseGENE3D3.10.28.10coord: 13..159
e-value: 2.6E-46
score: 159.1
IPR027434Homing endonucleaseSUPERFAMILY55608Homing endonucleasescoord: 19..160
NoneNo IPR availablePANTHERPTHR36181FAMILY NOT NAMEDcoord: 15..158
NoneNo IPR availablePANTHERPTHR36181:SF4coord: 15..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig94287contigP-canaliculata_contig94287:181..696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig94287.23450.1mRNA_P-canaliculata_contig94287.23450.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig94287 181..696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig94287.23450.1 ID=prot_P-canaliculata_contig94287.23450.1|Name=mRNA_P-canaliculata_contig94287.23450.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=172bp
NPQRLYVWRYIKQQKIIMTQLESQWIVGFVDGEGCFFIGINKNSEMKLGF
QVLPEFCVVQHKRDQQILQALKTFWGFGVVRKNHGDRLCYRVRGITHLNK
TIIPFFEKHDLKTKKKIDFLKFRKVIQLIEKKQHLTIEGLLEIDAIRLKM
NTGKLKKKLVLIDDQLHLVDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004860LAGLIDADG_2
IPR027434Homing_endonucl