prot_P-canaliculata_contig9428.23446.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9428.23446.1
Unique Nameprot_P-canaliculata_contig9428.23446.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length260
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9428.23446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..258
e-value: 2.0E-9
score: 38.2
IPR008615FNIPPFAMPF05725FNIPcoord: 74..115
e-value: 3.4E-10
score: 39.9
coord: 30..71
e-value: 1.4E-10
score: 41.1
coord: 205..245
e-value: 1.6E-7
score: 31.3
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 131..255
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 2..210
coord: 131..255
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 2..210
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 19..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9428contigP-canaliculata_contig9428:3143..3922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9428.23446.1mRNA_P-canaliculata_contig9428.23446.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9428 3143..3923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9428.23446.1 ID=prot_P-canaliculata_contig9428.23446.1|Name=mRNA_P-canaliculata_contig9428.23446.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=260bp
QLTLGTHFKQTIDGVAWPESLQRLTLVWNFDQPIHGVAWPKSLEQLIFGR
RFNQPIDEVSWPASLQELTFGVRFNQPIHGVEWPASLQQLIFGDHFDQPI
QEVSWPPSLRQLSFGFWFDQPIHGVEWPVLLQRLTFGRRFKQAVHEIAWP
ASLQDLELGANLKEIHGLTWPTSLQQLTLSKGFNHSVESASWPTSLQQLT
FTSSFNQPIDRVVWPASLKRLKFGNNFDQPIDGVIWPASLQQLTFDGVKF
NQPIDGVSWP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP