prot_P-canaliculata_contig9399.23408.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9399.23408.1
Unique Nameprot_P-canaliculata_contig9399.23408.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length216
Homology
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: D8LL28_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL28_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 3.770e-33
Identity = 144/219 (65.75%), Postives = 149/219 (68.04%), Query Frame = 0
Query:    1 DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGGRDSSXXXXXXXXXXXXXXXXXXXXXXXXXDPSSEVERDLGGGRWASSRTR---TQGGRAGRLR-GAMTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFIDSFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQ 215
            DG G   VGKGRQLAG+MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCG  D  XXXXXXXXXXXXXXXXXXXXXXXXX                    R        +GR+R GA                                XXXXXXXXXXXXXXXXXXXXXXXX VFI+SFQQNKHAYGTIRDGDGVMFLTYSSL+AANRDGKSRLKQ
Sbjct:  205 DGAG---VGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQCKVPSSSSGRVRRGAAVA-----------------ADAKLGNKNSEKXXXXXXXXXXXXXXXXXXXXXXXXXVFIESFQQNKHAYGTIRDGDGVMFLTYSSLIAANRDGKSRLKQ 403          
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: A0A6H5KPE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE5_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.720e-31
Identity = 132/199 (66.33%), Postives = 137/199 (68.84%), Query Frame = 0
Query:   18 MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGGRDSSXXXXXXXXXXXXXXXXXXXXXXXXXDPSSEVERDLGGGRWASSRTRTQGGRAGRLR-GAMTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFIDSFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQ 215
            MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCG  D  XXXXXXXXXXXXXXXXXXXXXXXXX       +   GG   + R R     +GR+R GA                                 XXXXXXXXXXXXXXXXXXX    GVFI+SFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQ
Sbjct:    1 MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRSGG--DAGRQRKVPSSSGRVRRGAAVA-----------------ADAKLGNKNSEEPXXXXXXXXXXXXXXXXXXXGGRGGVFIESFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQ 180          
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: A0A835ZH69_9STRA (P-loop containing NTP hydrolase pore-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH69_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 7.940e-13
Identity = 39/54 (72.22%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGGR 54
            DG G   VGKGRQLA M+LEN L GR KH+WISVG DLA DARRDLDD+G G R
Sbjct:  114 DGAG---VGKGRQLAAMILENTLRGRNKHIWISVGADLALDARRDLDDIGAGPR 164          
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: B9RYK7_RICCO (PHD-type domain-containing protein n=2 Tax=Ricinus communis TaxID=3988 RepID=B9RYK7_RICCO)

HSP 1 Score: 72.8 bits (177), Expect = 2.830e-11
Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    1 DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLG 50
            DG G   VGKGR +AG++ EN+LHGRRK +WISVG+DL FDARRDLDD+G
Sbjct:  272 DGAG---VGKGRTIAGLIWENWLHGRRKTLWISVGSDLKFDARRDLDDVG 318          
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: A0A392NJA3_9FABA (Strawberry notch-like protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NJA3_9FABA)

HSP 1 Score: 68.6 bits (166), Expect = 4.510e-11
Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLG 50
            DG G   VGKGR +AG++ EN+ HGR+K +WISVG+DL +DARRDLDD+G
Sbjct:  103 DGAG---VGKGRTIAGLIWENWQHGRKKALWISVGSDLKYDARRDLDDMG 149          
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: A0A392NWL2_9FABA (Strawberry notch-like protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NWL2_9FABA)

HSP 1 Score: 68.6 bits (166), Expect = 7.730e-11
Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLG 50
            DG G   VGKGR +AG++ EN+ HGR+K +WIS+G+DL FDARRDLDD+G
Sbjct:   78 DGAG---VGKGRTVAGLIWENWHHGRKKALWISIGSDLKFDARRDLDDMG 124          
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: A0A4S4DFJ6_CAMSI (AAA_34 domain-containing protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4DFJ6_CAMSI)

HSP 1 Score: 70.9 bits (172), Expect = 9.200e-11
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLG 50
            DG G   VGKGR +AG++ EN+ HGRRK +WISVG+DL FDARRDLDD+G
Sbjct:  132 DGAG---VGKGRTIAGLIFENWHHGRRKALWISVGSDLKFDARRDLDDVG 178          
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: A0A5A7PMK8_STRAF (RING/FYVE/PHD zinc finger superfamily protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PMK8_STRAF)

HSP 1 Score: 71.2 bits (173), Expect = 9.490e-11
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLG 50
            DG G   VGKGR +AG++ EN+ HGRRK VWISVG+DL FDARRDLDD+G
Sbjct:  233 DGAG---VGKGRTIAGLIWENWHHGRRKAVWISVGSDLKFDARRDLDDVG 279          
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: A0A2P6Q813_ROSCH (Putative chromatin regulator PHD family n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6Q813_ROSCH)

HSP 1 Score: 71.2 bits (173), Expect = 9.500e-11
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLG 50
            DG G   VGKGR +AG++ EN+ HGRRK VWISVG+DL FDARRDLDD+G
Sbjct:  249 DGAG---VGKGRTIAGLIWENWHHGRRKAVWISVGSDLKFDARRDLDDVG 295          
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Match: A0A0S3SAA4_PHAAN (AAA_34 domain-containing protein n=1 Tax=Vigna angularis var. angularis TaxID=157739 RepID=A0A0S3SAA4_PHAAN)

HSP 1 Score: 70.1 bits (170), Expect = 1.110e-10
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLG 50
            DG G   VGKGR +AG++ EN+ HGRRK +WISVG+DL FDARRDLDD+G
Sbjct:  251 DGAG---VGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDVG 297          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9399.23408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL28_ECTSI3.770e-3365.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KPE5_9PHAE1.720e-3166.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZH69_9STRA7.940e-1372.22P-loop containing NTP hydrolase pore-1-domain-cont... [more]
B9RYK7_RICCO2.830e-1170.00PHD-type domain-containing protein n=2 Tax=Ricinus... [more]
A0A392NJA3_9FABA4.510e-1164.00Strawberry notch-like protein (Fragment) n=1 Tax=T... [more]
A0A392NWL2_9FABA7.730e-1164.00Strawberry notch-like protein (Fragment) n=1 Tax=T... [more]
A0A4S4DFJ6_CAMSI9.200e-1168.00AAA_34 domain-containing protein n=2 Tax=Camellia ... [more]
A0A5A7PMK8_STRAF9.490e-1170.00RING/FYVE/PHD zinc finger superfamily protein n=1 ... [more]
A0A2P6Q813_ROSCH9.500e-1170.00Putative chromatin regulator PHD family n=2 Tax=Ro... [more]
A0A0S3SAA4_PHAAN1.110e-1068.00AAA_34 domain-containing protein n=1 Tax=Vigna ang... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039187Strawberry notch, AAA domainPFAMPF13872AAA_34coord: 8..57
e-value: 1.9E-16
score: 59.9
IPR026741Protein strawberry notchPANTHERPTHR12706STRAWBERRY NOTCH-RELATEDcoord: 6..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9399contigP-canaliculata_contig9399:479..1126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9399.23408.1mRNA_P-canaliculata_contig9399.23408.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9399 479..1127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9399.23408.1 ID=prot_P-canaliculata_contig9399.23408.1|Name=mRNA_P-canaliculata_contig9399.23408.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=216bp
DGGGREKVGKGRQLAGMMLENFLHGRRKHVWISVGNDLAFDARRDLDDLG
CGGRDSSSSSHNDEDQDQDDDDDSAEDQGEGEDPSSEVERDLGGGRWASS
RTRTQGGRAGRLRGAMTTRRQQASVIKGDDEEEDIIESREGQKRKREHKE
RASTSKGAPAGGRRGAVLGGGGVFIDSFQQNKHAYGTIRDGDGVMFLTYS
SLVAANRDGKSRLKQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039187SNO_AAA
IPR026741SNO