prot_P-canaliculata_contig93783.23382.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93783.23382.1
Unique Nameprot_P-canaliculata_contig93783.23382.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length336
Homology
BLAST of mRNA_P-canaliculata_contig93783.23382.1 vs. uniprot
Match: A0A518ERI7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ERI7_9BACT)

HSP 1 Score: 238 bits (608), Expect = 4.310e-67
Identity = 135/337 (40.06%), Postives = 214/337 (63.50%), Query Frame = 0
Query:    1 DPIEVSIAQAGKLARAGKYKEAVDQMLPVIRGGGPKATEGRIMLSIFAIRAGEPAIAAKYLQDAAMGDLGIYQNAALDSLLSAIDSALNQDQSKRKL--RGALTREDAERMLRDLTGRYPLDPLIALARLKMQDV-AEGERGARARGILTELHRSSGGQSLDQLRPGATKQWVEFLAPIAAGVAAELVEEELEQQPGNVELLQLAGYVAEAAGDLQAAKRDYQTLLAIDPRAETGYGLAEILIAEGAPPSDIVPMLTQAGRLQGGGSARSVYLRSVADIR--------VAKPQLDNLVERLASLWNQRTRSRDEVDPLDIGLLYADVLVRRGTDDDR 326
            +PIE+ +A+AG+LAR GK  EA+ ++ P IR G    TEGR++L I  IR+ + ++AA+ L  A   D G+++   +D+LL A++ ++ + ++      RG L+ + A  ML+ L+ RYPLDP++ LA LK++    E +RG RA+  L  L  +SG + LDQLR G T++W+++LAP A  VA ++++ +L  +PGN++L QL+G +AE   D  AA+  Y TL+AIDPR +T   LA I+I EG+  +    +L+ A     G S+R +YL++VAD+R        + +P+L  +V RL  +W  R R R +V+P+D+GLL+AD L R+ +  DR
Sbjct: 1060 NPIEIHLAKAGELARLGKNTEAIQELEPAIRAGEIGVTEGRLILGILMIRSQQYSLAAQQLDRALQQDPGVFKETVIDALLFALEESIKRARNPEGAPQRGQLSEQAALAMLKSLSERYPLDPMVTLAELKLETPEVESDRGIRAQRALDRLFLNSGRKPLDQLRRGCTRRWIDYLAPHAPEVAQKILQRDLVLEPGNLDLWQLSGDIAELQKDYPAARSYYATLMAIDPRPKTALALAGIMIEEGSDIATARKILSDASAELAGSSSRPIYLQTVADLRDPFLDRPGMGRPKLAEIVPRLRGMWEARQRIRKDVEPVDLGLLFADALFRQLSAIDR 1396          
BLAST of mRNA_P-canaliculata_contig93783.23382.1 vs. uniprot
Match: A0A523P6F3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523P6F3_9BACT)

HSP 1 Score: 134 bits (337), Expect = 4.560e-31
Identity = 115/344 (33.43%), Postives = 176/344 (51.16%), Query Frame = 0
Query:    3 IEVSIAQAGKLARAGKYKEAVDQMLPVIRGGGPKATEGRIMLSIFAIRAGE-PAIAAKYLQ--DA---AMGDLGIYQNAALDSLLSAIDSALNQDQSKRKLRGALTREDAERMLRDLTGRYPLDPLIALARLKMQDVAEGERGA----RARGILTELHRSSGGQSLDQLRPGATKQWVEFLAPIAAGVAAELVEEELEQQPGNVELLQLAGYVAEAAGDLQAAKRDYQTLLAIDPRAETGYGLAEILIAEGAPPSDIVPMLTQAGRLQGGGSARSVYLRSVADIRVAKPQLDNLVERLASLWNQRTRSRD-EVDPLDIGLLYADVLVRRGTDDDRIAMDRLVAE 335
            +E+++ +A   A A   ++AV+ +   +   GP A  GR +L+    R G+ P   A++ +  DA   +  D  I +  AL  L +A D A   DQS+  L     R+  ER    L  R+P DPL+AL  L   ++A GE       RA  +L +L ++S G  L+ LR G+T+ WV FL  +    A  LV+ +L+Q+PG+++L  L        GD   A   Y+ L+ +    E  YGLA +L   GAP   I P L  A   QG  SARS+++ +  D++  KP   +++  L  LW  R R  + +VDPL +G  +A  L+RR T  D  ++ RL+ E
Sbjct:  998 LEIAVDRASARAAAQDLRQAVEILKRALAEAGPDAVYGRDLLARLCARRGDYPCAVAEFARVCDALPPSSDDPLIAEYLAL--LRAASDPA---DQSQTPLGSEYRRQALER----LHERFPTDPLVALE-LAKHELASGENRTIAVLRAMRLLEDLRQASRGVPLEALRRGSTQLWVSFLLDVDPERALSLVQNDLQQRPGDLDLWLLEARTTVKRGDDAGAFELYEALVDMTSDPEALYGLAWLLAERGAPLGKIKPHLLAAD--QGELSARSLFIWTRMDMQSQKPNFKHILRTLQQLWTNRARLPELDVDPLFVGRTFAAALIRRATPMDFESLRRLLPE 1329          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93783.23382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A518ERI7_9BACT4.310e-6740.06Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A523P6F3_9BACT4.560e-3133.43Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 13..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93783contigP-canaliculata_contig93783:113..1120 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93783.23382.1mRNA_P-canaliculata_contig93783.23382.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93783 113..1120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93783.23382.1 ID=prot_P-canaliculata_contig93783.23382.1|Name=mRNA_P-canaliculata_contig93783.23382.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=336bp
DPIEVSIAQAGKLARAGKYKEAVDQMLPVIRGGGPKATEGRIMLSIFAIR
AGEPAIAAKYLQDAAMGDLGIYQNAALDSLLSAIDSALNQDQSKRKLRGA
LTREDAERMLRDLTGRYPLDPLIALARLKMQDVAEGERGARARGILTELH
RSSGGQSLDQLRPGATKQWVEFLAPIAAGVAAELVEEELEQQPGNVELLQ
LAGYVAEAAGDLQAAKRDYQTLLAIDPRAETGYGLAEILIAEGAPPSDIV
PMLTQAGRLQGGGSARSVYLRSVADIRVAKPQLDNLVERLASLWNQRTRS
RDEVDPLDIGLLYADVLVRRGTDDDRIAMDRLVAEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf