prot_P-canaliculata_contig9371.23375.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9371.23375.1
Unique Nameprot_P-canaliculata_contig9371.23375.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length476
Homology
BLAST of mRNA_P-canaliculata_contig9371.23375.1 vs. uniprot
Match: A0A6H5JS18_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS18_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.400e-23
Identity = 85/248 (34.27%), Postives = 131/248 (52.82%), Query Frame = 0
Query:    2 AVVDAKAGTKADKTEERLKNADKNILGAAAVRMGSRQCGPGAVAISFGDARASDERALVGVLRRRNGGADATASSLMSGSANGRSSPATTGGTPAGVPALGYELRFEMGVLDTNELGKLAGATCEELDLFVNTGFLVEQIDRERAVKMMEEVIKSRFKKVWGGKVLLKFVGNESGSSISG-GSDVVGLGALCFSELCVHYGVEGDTFYAMGLKTNWFVNGWRVDD--VPTADEFDRLTKALASMLLDG 246
            A+VDAKAG +A+K  E+ K A+    G A  +   R+C PGA + SFG A ASDERA   VL+R            +S + + R+S    GG    +P LG +++ ++   +  +L  + GAT E++DL +  GF  EQ+  E AV ++E+ + +R +  WG   L  F      S + G G ++ G  A    ELC  YG +   F A   + + + +GW V D   PT +E D L++ LA++L+ G
Sbjct:   97 AIVDAKAGLRAEKRIEKEKLANIRAAGVAEKQNAERRCAPGAGSTSFGAAHASDERARAKVLQRE-----------LSTAGSQRASEG--GGAARKLPPLGADIQKKLSAQNEVDLAYITGATTEQVDLVLTKGFTQEQLPWETAVCILEQAVGNRLRAPWGNLSLHDF------SVVKGAGFEIGGFDAYMVKELCDKYGADYQLFMACD-RVSVYTDGWTVGDPGCPTEEELDGLSEKLATLLVYG 324          
BLAST of mRNA_P-canaliculata_contig9371.23375.1 vs. uniprot
Match: A0A6H5JPE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPE7_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.450e-23
Identity = 85/248 (34.27%), Postives = 131/248 (52.82%), Query Frame = 0
Query:    2 AVVDAKAGTKADKTEERLKNADKNILGAAAVRMGSRQCGPGAVAISFGDARASDERALVGVLRRRNGGADATASSLMSGSANGRSSPATTGGTPAGVPALGYELRFEMGVLDTNELGKLAGATCEELDLFVNTGFLVEQIDRERAVKMMEEVIKSRFKKVWGGKVLLKFVGNESGSSISG-GSDVVGLGALCFSELCVHYGVEGDTFYAMGLKTNWFVNGWRVDD--VPTADEFDRLTKALASMLLDG 246
            A+VDAKAG +A+K  E+ K A+    G A  +   R+C PGA + SFG A ASDERA   VL+R            +S + + R+S    GG    +P LG +++ ++   +  +L  + GAT E++DL +  GF  EQ+  E AV ++E+ + +R +  WG   L  F      S + G G ++ G  A    ELC  YG +   F A   + + + +GW V D   PT +E D L++ LA++L+ G
Sbjct:   94 AIVDAKAGLRAEKRIEKEKLANIRAAGLAEKQNAERRCAPGAGSTSFGAAHASDERARAKVLQRE-----------LSTAGSQRASEG--GGAARKLPPLGADIQKKLSAQNEVDLAYITGATTEQVDLVLTKGFTQEQLPLETAVCILEQAVGNRLRAPWGNLSLQDF------SVVKGAGFEISGFDAYMVKELCDKYGADYQLFMACD-RVSVYTDGWTVGDPGCPTEEELDGLSEKLATLLVYG 321          
BLAST of mRNA_P-canaliculata_contig9371.23375.1 vs. uniprot
Match: D7G106_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G106_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 2.170e-21
Identity = 93/280 (33.21%), Postives = 132/280 (47.14%), Query Frame = 0
Query:    3 VVDAKAGTKADKTEERLKNADKNILGAAAVRMGSRQCGPGAVAISFGDARASDERALVGVLRRRNGGADATASSLMSGSANGRSSPATTGGT----------------------PAGV---PALGYELRFEMGVLDTNELGKLAGATCEELDLFVNTGFLVEQIDRERAVKMMEEVIKSRFKKVWGGKVLLKFVGNESGSSISGGSDVVGLGALCFSE-------------LCVHYGVEGDTFYAMGLKTNWFVNGWRVDDVPTADEFDRLTKALASMLL 244
            V+DA+ G +AD  +E+ + A  N+LG +A+ MG+ +CGPGA A SFG+A ASDER + GV+  R      T     SGS +GRSSPA  GG                         GV   P LG  L   +       L    G T E+ DLF+N GF  +QI  + A +MME VI      +  GK + +FV +     ++   D  G+  +  S+             L VHY  +   F  +     + + GW V + P+ + FD LT+ALAS L+
Sbjct:  193 VLDARTGERADSQQEKARKAGHNLLGQSAIDMGNSRCGPGAAATSFGEAHASDERRMSGVIDSRGRMPGFT----PSGSGSGRSSPANIGGVVGFGSGGGSGXXXXXXXXXXXXXGGVTLTPPLGSPLANLLRAPTMEILASKVGVTREQADLFLNAGFRPDQIPHDVATRMMESVIAGYLMGLRDGKSVDRFVRDI----VAADEDAYGMDPVDTSKAPGLDRRGNLTHALFVHYNQDYPAFRVLPHAERYRL-GWPVLEEPSDEIFDGLTRALASRLV 463          
BLAST of mRNA_P-canaliculata_contig9371.23375.1 vs. uniprot
Match: D7FL52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL52_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.190e-19
Identity = 90/282 (31.91%), Postives = 134/282 (47.52%), Query Frame = 0
Query:    4 VDAKAGTKADKTEERLKNADKNILGAAAVRMGSRQCGPGAVAISFGDARASDERALVGVL--RRRNGGADATASSLMSGSANGRSSPATTGGTPAG--------------------------VPALGYELRFEMGVLDTNELGKLAGATCEELDLFVNTGFLVEQIDRERAVKMMEEVIKSRFKKVWGGKVLLKFVGNESGSSISGGSDVVGLGALCFSE-------------LCVHYGVEGDTFYAMGLKTNWFVNGWRVDDVPTADEFDRLTKALASMLL 244
            VD++AG +AD  +E+ + A +N+LG +A+ MG+ +CGPGA A +FG+A AS+ER + GV+  RRR  G         SGS +GRSSPA  GG  AG                           P LG  L   +       L    G T E+ DLF+N GF  +QI  + A +MME+VI   F  +  GK +  +V +     ++   D  G+  +  S+             L  HY  +  +   +     + + GW V + P+ + FD LT+ LAS L+
Sbjct:  183 VDSRAGERADSRQEKARKAGQNLLGLSAIDMGNSRCGPGAAATTFGEAHASEERRMSGVIDNRRRMPGF------TPSGSGSGRSSPANIGGV-AGFGSGSGNSSXXXXXXXXXXXXXXVTLTPPLGSTLAALLRAPTIERLASKVGVTREQADLFLNVGFRPDQIPHDVATRMMEDVIADYFMGLRDGKSVDAYVRDI----VAADEDADGMDPVDTSKAPGLDRFGNLTHALFAHYNQDYASSTVLPYAERYRL-GWLVLEGPSDEIFDGLTRTLASRLV 452          
BLAST of mRNA_P-canaliculata_contig9371.23375.1 vs. uniprot
Match: A0A6H5KHG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG7_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 8.310e-16
Identity = 79/247 (31.98%), Postives = 117/247 (47.37%), Query Frame = 0
Query:    2 AVVDAKAGTKADKTEERLKNADKNILGAAAVRMGSRQCGPGAVAISFGDARASDERALVGVLRRRNGGADATASSLMSGSANGRSSPATTGGTPAGVPALGYELRFEMGVLDTNELGKLAGATCEELDLFVNTGFLVEQIDRERAVKMMEEVIKSRFKKVWGGKVLLKFVGNESGSSISGGSDVVGLGALCFSELCVHYGVEGDTFYAMGLKTNWFVNGWRVDD--VPTADEFDRLTKALASMLLDG 246
            A+VDAKAG +A+K  E+ K A+    G A  +   R+C PGA + SFG A ASDERA   VL+R            +S + + R+S    GG    +P LG +++ ++   +  +L  + GAT E++DL +  GF  EQ+  E A           F  V G                  G  + G  A    ELC  YG +   F A   + + + +GW V D   PT +E D L++ LA++L+ G
Sbjct:    8 AIVDAKAGLRAEKRIEKGKLANIRAAGLAEKQNAERRCAPGAGSTSFGAAHASDERARAKVLQRE-----------LSTAGSQRASEG--GGAARKLPPLGADIQKKLSAQNEVDLAYITGATTEQVDLVLTKGFTQEQLPLETA----------DFSVVKGA-----------------GFQISGYDAYMVKELCDKYGADYQLFMACD-RVSVYTDGWTVGDPGCPTEEELDGLSEKLATLLVYG 213          
BLAST of mRNA_P-canaliculata_contig9371.23375.1 vs. uniprot
Match: D7G4Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y0_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.860e-14
Identity = 81/249 (32.53%), Postives = 111/249 (44.58%), Query Frame = 0
Query:   34 MGSRQCGPGAVAISFGDARASDERALVGVLRRRNGGADATASSLMSGSANGRSSPATTGGT----------------------PAGV---PALGYELRFEMGVLDTNELGKLAGATCEELDLFVNTGFLVEQIDRERAVKMMEEVIKSRFKKVWGGKVLLKFVGNESGSSISGGSDVVGLGALCFSE-------------LCVHYGVEGDTFYAMGLKTNWFVNGWRVDDVPTADEFDRLTKALASMLL 244
            MG+ +CGPGA A SFG+A ASDER + GV+  R      T     SGS +GRSSPA  GG                         GV   P LG  L   +       L    G T E+ DLF+N GF  +QI  + A +MME VI      +  GK + +FV +     ++   D  G+  +  S+             L VHY  +   F  +     + + GW V + P+ + FD LT+ALAS L+
Sbjct:    1 MGNSRCGPGAAATSFGEAHASDERRMSGVIDSRGRMPGFT----PSGSGSGRSSPANIGGVVGFGSGGGSGXXXXXXXXXXXXXGGVTLTPPLGSPLANLLRAPTMEILASKVGVTREQADLFLNAGFRPDQIPHDVATRMMESVIAGYLMGLRDGKSVDRFVRDI----VAADEDAYGMDPVDTSKAPGLDRRGNLTHALFVHYNQDYPAFRVLPHAERYRL-GWPVLEEPSDEIFDGLTRALASRLV 240          
BLAST of mRNA_P-canaliculata_contig9371.23375.1 vs. uniprot
Match: A0A6H5KTA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA0_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.170e-11
Identity = 66/181 (36.46%), Postives = 91/181 (50.28%), Query Frame = 0
Query:    2 AVVDAKAGTKADKTEERLKNADKNILGAAAVRMGSRQCGPGAVAISFGDARASDERALVGVLRRRNGGADATASSLMSGSANGRSSPATTGGTPAGVPALGYELRFEMGVLDTNELGKLAGATCEELDLFVNTGFLVEQIDRERAVKMMEEVIKSRFKKVWGGKVLLKF-VGNESGSSISG 181
            A+VDAKAG +A+K  E+ K A+  + G A  +   R+C PGA + SFG A ASDERA   VL+R    A +  +S   G+A  R  P      P G      + R E         G    AT E++DL +  GF  EQ+  E AV ++E+ + +R +  WG   L  F V   +G  ISG
Sbjct:   69 AIVDAKAGMRAEKKIEKEKLANIRVAGLAEKQNAERRCAPGAGSTSFGAAHASDERARAKVLQRELSTAGSQRASEGGGAA--RKLP------PLGADIXSGQARGE---------GLHGRATTEQVDLVLTKGFTQEQLPLETAVCILEQAVGNRLRAPWGNLSLQDFSVVKRAGFEISG 232          
BLAST of mRNA_P-canaliculata_contig9371.23375.1 vs. uniprot
Match: A0A6H5K0A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A1_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 7.680e-10
Identity = 70/211 (33.18%), Postives = 98/211 (46.45%), Query Frame = 0
Query:    2 AVVDAKAGTKADKTEERLKNADK----NILGAAAVRMGSRQCGPGAVAISFGDARASDERALVGVLRRRNGGADATASSLMSGSANGRSSPATTGG-------------------------------TPAG------VPALGYELRFEMGVLDTNELGKLAGATCEELDLFVNTGFLVEQIDRERAVKMMEEVIKSRFKKVWGGKVLLKFV 171
            A+VDAKA  + D  E + K AD+    + +G  A+  G+ +CGPGA A SF +A A+D  AL      R+G A         G A+GR SPA++ G                               +PAG      VP LG EL   MG L    L + AG + EE D F+NTGF+ +++  ERA+ MM  ++  R     GG  +  F+
Sbjct:  179 AIVDAKAAARHDSEETKQKKADEAASHSAMGMWAINQGNARCGPGAKATSFEEAVAADNIAL----GSRSGAA-------AGGRASGRVSPASSIGGARPASEASTVXXXXXXXXXXXXXXXLDDDISPAGSGPSRKVPPLG-ELVKHMGSLSIPTLAQSAGVSTEEADYFLNTGFMADEVQPERAMAMMTVLLDKRHSLQRGGDSVQDFM 377          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9371.23375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JS18_9PHAE1.400e-2334.27Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JPE7_9PHAE2.450e-2334.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G106_ECTSI2.170e-2133.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FL52_ECTSI1.190e-1931.91Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KHG7_9PHAE8.310e-1631.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4Y0_ECTSI1.860e-1432.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTA0_9PHAE1.170e-1136.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0A1_9PHAE7.680e-1033.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 357..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9371contigP-canaliculata_contig9371:1735..3346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9371.23375.1mRNA_P-canaliculata_contig9371.23375.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9371 1389..3643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9371.23375.1 ID=prot_P-canaliculata_contig9371.23375.1|Name=mRNA_P-canaliculata_contig9371.23375.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=476bp
MAVVDAKAGTKADKTEERLKNADKNILGAAAVRMGSRQCGPGAVAISFGD
ARASDERALVGVLRRRNGGADATASSLMSGSANGRSSPATTGGTPAGVPA
LGYELRFEMGVLDTNELGKLAGATCEELDLFVNTGFLVEQIDRERAVKMM
EEVIKSRFKKVWGGKVLLKFVGNESGSSISGGSDVVGLGALCFSELCVHY
GVEGDTFYAMGLKTNWFVNGWRVDDVPTADEFDRLTKALASMLLDGHYST
GPLSDGGGRDSGNGSSSALGSGNDERASGTGAPSGSGPSRQSKGDGKSRK
NTKRSDEVNLEGMLEQSTRESKKRAYQGELGEDAGETRKEKRKWEEMQEH
RKVRKMALDAERELRADERTAAAATEDATRKEERIAADAIRREERITADA
IRREERIAADAIRREERITADAIRREERIAADAISREDTIRQERKDEEDK
RRQERKDERAHELAMLQMQLELSKT*
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