prot_P-canaliculata_contig93573.23366.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93573.23366.1
Unique Nameprot_P-canaliculata_contig93573.23366.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length305
Homology
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Match: A0A518EXA9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EXA9_9BACT)

HSP 1 Score: 269 bits (687), Expect = 6.520e-82
Identity = 147/312 (47.12%), Postives = 198/312 (63.46%), Query Frame = 0
Query:    4 RTGRRALIA--LLLLGLLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHMAADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDYLRANPWRAHRLARVLFALIASLTPLFVYLGCRAAGLRQGAWVAAWLAATSLLLVHLSLHERPWAPMMAPLAACLWGAIVHMRTGSLRSLLGSGLAAAIAGSMHQGGLFFLAITGMAWALAP-------SSAVGSFLRRVRGGFLAVLLFIVVAGAVGYPYLLVHGDALQ--VAGDTHLPPGLVSFSLGGQRLVFQFRPASFPELAGAFVGYDP 304
            +T RR  +   LLLL ++P  LRLWPI H AP   +VPDTH+V+NAL+MA D++L+PP+G YS+YPYLL Y L+P YAA+Y  G+  G WA    +G  L+ NPWRAH LAR++ A++++   +F++L  RAAG   GAW+A W   TSLL V +S HERPWAP+ A LAA +WGA VH RTGSLRSLL +G+ A++A S    G   L + G+AWALAP       + A  +FL+RV  GF  V LF+ +A  VGYP+ L +G+     VA    +   + +   GG ++   F  A+   L   F GYDP
Sbjct:   14 QTPRRGQLVGLLLLLLVVPLGLRLWPIAHGAPRAAYVPDTHIVKNALNMAKDKNLVPPAGAYSSYPYLLPYTLLPIYAAEYARGRVMGDWAGSGEFGAKLQENPWRAHLLARIVCAVLSASVAIFLFLAARAAGFGVGAWIAGWFGGTSLLHVQMSTHERPWAPLTAMLAATVWGAAVHTRTGSLRSLLLTGVIASMAFSTLPVGGLALLMAGVAWALAPRPEGELLAPARTAFLKRVVRGFACVGLFVALAAVVGYPFYLRYGEGAVTGVAAGDLVTEDMWTIQFGGTQMRVGFSLATLQGLMRTFFGYDP 325          
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Match: A0A2D5XNC6_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XNC6_9BACT)

HSP 1 Score: 260 bits (664), Expect = 5.470e-79
Identity = 151/304 (49.67%), Postives = 197/304 (64.80%), Query Frame = 0
Query:   10 LIALLLLGLLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHMAADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDYLRANPWRAHRLARVLFALIASLTPLFVYLGCRAAGLRQGAWVAAWLAATSLLLVHLSLHERPWAPMMAPLAACLWGAIVHMRTGSLRSLLGSGLAAAIAGSMHQGGLFFLAITGMAWALAPSSAVGSFLR-RVRGGFLAVLLFIVVAGAVGYPYLLVHG----DAL----QVAGDTHLPPGLVSFSLGGQRLVFQFRPASFPELAGAFVGYDP 304
            ++ LL L +  A LRL+PI+H  P    VPDTH+VR AL MA DRD IPP G++STYP LL YVL+P Y   +  G+ +G W +   Y   ++A+P RAH LARV+ ALI++L PLFV LG RAAG  +GAW A  L+A+SLLLV L+ HERPWAP+   +A  +W A +H RTG+ R LL SGLAAA+A S HQ G F + I  +AWA AP    G+  R R+R GFL   LF+V+A  VG+PYL+ +G    +A+    Q+AG  H+       S+GGQ +VFQ    +F +L  A VGYDP
Sbjct:    1 MLGLLALLVFSAGLRLFPIQHGLPD-NHVPDTHVVRAALGMAQDRDPIPPVGRWSTYPNLLPYVLIPCYVGQFALGQVRGEWDEPGAYAKAIKASPERAHLLARVVLALISALAPLFVVLGLRAAGYGRGAWCAGLLSASSLLLVQLATHERPWAPLATFIALSMWPAAIHARTGATRPLLLSGLAAALAFSTHQAGAFAVLIPALAWASAPRGWQGAERRERLRIGFLCAGLFVVLALTVGHPYLIRYGMTPTEAVAAGEQLAGSQHV-------SIGGQSVVFQLSAQTFQKLGKALVGYDP 296          
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Match: A0A518BJ82_9BACT (PMT_2 domain-containing protein n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BJ82_9BACT)

HSP 1 Score: 246 bits (628), Expect = 1.760e-73
Identity = 144/309 (46.60%), Postives = 182/309 (58.90%), Query Frame = 0
Query:    5 TGRRALIALLLLGLLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHMAADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDYLRANPWRAHRLARVLFALIASLTPLFVYLGCRAAGLRQGAWVAAWLAATSLLLVHLSLHERPWAPMMAPLAACLWGAIVHMRTGSLRSLLGSGLAAAIAGSMHQGGLFFLAITGMAWALAPSSAVG--SFLRRVRGGFLAVLLFIVVAGAVGYPYLLVHG--DALQVAG-----DTHLPPGLVSFSLGGQRLVFQFRPASFPELAGAFVGYDP 304
            TG   L  L LL +LP  LR  PI H  P    VPDTH+VR AL MA D+D  PP G+YSTYPYLL Y L+P YAA Y  G++ G W+    + + +  +P   H  AR++ A +++L P  VY G R AGLR GAW+AAWL AT LL +H S+ ERPW PMM+ LA  +W A  ++R G+LR LL  G A  +A + HQ GL  L + G+AW   P    G  S  RR+  G +AV  F +V   +GYPY LVHG  DA QVAG     ++    G V  +LGGQ + F  R  S   L+ A VGYDP
Sbjct:    7 TGVGRLAGLFLLLVLPLSLRWLPIGHGLPQ-NHVPDTHVVRCALGMAKDKDPFPPVGRYSTYPYLLPYTLLPVYAAQYAVGRATGEWSGSGEFANRVLEHPEDVHLTARLVLAALSALAPWLVYRGARVAGLRSGAWIAAWLVATGLLHLHFSVQERPWGPMMSFLALSIWPAARYVRGGALRDLLLCGAAGGLAVATHQAGLPLLLVAGIAWFAGPHGFTGGASLRRRLGHGLVAVGAFALVGLLLGYPYRLVHGATDAGQVAGIAEAGESAESSGGVDLTLGGQGIAFDIRWESLEHLSRALVGYDP 314          
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Match: A0A7C8CWL4_9BACT (PMT_2 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CWL4_9BACT)

HSP 1 Score: 234 bits (596), Expect = 5.630e-69
Identity = 138/310 (44.52%), Postives = 183/310 (59.03%), Query Frame = 0
Query:    2 RARTGRRALIALLLLGLLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHMAADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDYLRANPWRAHRLARVLFALIASLTPLFVYLGCRAAGLRQGAWVAAWLAATSLLLVHLSLHERPWAPMMAPLAACLWGAIVHMRTGSLRSLLGSGLAAAIAGSMHQGGLFFLAITGMAWALAP-----SSAVGSFLRRVRGGFLAVLLFIVVAGAVGYPYLLVHGDALQ--VAGDTHLPPGLVSFSLGGQRLVFQFRPASFPELAGAFVGYDP 304
            RA +  R    +LLL LLP  +R   + H      +VPDTH+VR+AL MA D + +PP GKYS YP LL Y L+P YA D++ G+  G W    GY  +L+ +P  AH +AR L  L+ SLTPL ++ G RAAGL  GAWV   LAA+ LLL+     ERPWAP+   +A   WG+I H+R+GSLR L   G+AA +A + HQ GL  L + G+AW + P     S A+G+   R++ G L V+LF +VA  +G+PY LVHG      V G       L ++++GG  LV   R  SF  L  A VGYDP
Sbjct:   11 RAPSPWRRFAPVLLLFLLPLAVRAAALGHGGQRG-YVPDTHIVRSALGMARDMNPVPPVGKYSVYPNLLPYCLLPLYATDFVFGRMSGRWDGKEGYKAHLQLHPAEAHHIARWLILLLGSLTPLVLFHGARAAGLGPGAWVTGALAASCLLLLQFCTQERPWAPLTTFIAFAAWGSIAHVRSGSLRPLFLCGVAAGLAFATHQAGLMALGLAGLAWLMGPLHWRGSRALGA---RLKVGVLCVVLFALVAVIIGHPYWLVHGPTASQAVVGGAAQNEALGAWTIGGMTLVPTLRLQSFAPLFRALVGYDP 316          
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Match: A0A800G2S4_9BACT (PMT_2 domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A800G2S4_9BACT)

HSP 1 Score: 233 bits (595), Expect = 6.680e-69
Identity = 136/289 (47.06%), Postives = 175/289 (60.55%), Query Frame = 0
Query:   18 LLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHMAADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDYLRANPWRAHRLARVLFALIASLTPLFVYLGCRAAGLRQGAWVAAWLAATSLLLVHLSLHERPWAPMMAPLAACLWGAIVHMRTGSLRSLLGSGLAAAIAGSMHQGGLFFLAITGMAWALAPSSAVGSFLRRVRGGFLAVLLFIVVAGAVGYPYLLVHG--DALQVAGDTHLPPGLVSFSLGGQRLVFQFRPASFPELAGAFVGYDP 304
            +LP  LRL PIEH  P    V DTH+V+NAL MA D D +PP G+YSTYPYLLSY L+P YA +Y AG+  G W+    + + L A P  AHR AR L AL+A L PL ++   R+AGL+ GAW+AA+L  T LL +  S+ ERPWAP+++ +A   WGA   + +G    LL S +AA +A + HQ G   L ITG+AW      A          GF AV LF V A A+G+PY ++HG  D   VA    L  G  S S+GGQ LVF FR  ++ +L+ A VGYDP
Sbjct:    3 ILPLALRLAPIEHGMPR-NHVADTHIVKNALGMARDLDPVPPMGRYSTYPYLLSYALLPIYAVEYGAGRVLGEWSGKGEFAERLFAEPDLAHRPARYLCALLACLAPLAMFGAARSAGLKSGAWIAAYLVGTGLLHLQFSIQERPWAPLVSFMALAGWGATAFVNSGRRVHLLASAVAAGLAFATHQAGAAALGITGLAWLTCARRASADGKAAFGLGFKAVALFAVTALALGHPYYVMHGAVDKSAVAASEAL--GSNSISIGGQALVFAFRAETWHKLSRALVGYDP 288          
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Match: A0A2D5WAF0_9BACT (PMT_2 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5WAF0_9BACT)

HSP 1 Score: 229 bits (585), Expect = 3.890e-67
Identity = 135/308 (43.83%), Postives = 181/308 (58.77%), Query Frame = 0
Query:    6 GRRALIALLLLGLLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHMAADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDYLRANPWRAHRLARVLFALIASLTPLFVYLGCRAAGLRQGAWVAAWLAATSLLLVHLSLHERPWAPMMAPLAACLWGAIVHMRTGSLRSLLGSGLAAAIAGSMHQGGLFFLAITGMAWALAPSSAVGSFL-----RRVRGGFLAVLLFIVVAGAVGYPYLLVHG----DALQVAGDTHLPPGLVSFSLGGQRLVFQFRPASFPELAGAFVGYDP 304
             RR L  L L+ +LP  LRL PI H  P   ++PDTHLV+N+L MA DRD +P  G+YSTYP LL Y+L+P YAA Y  G +   W+D A YG+ L ANP   H LAR+L AL+ +  P  +Y   R AGL  GA+ AA+L AT+LL +  S  ERPW  ++   A   WG I ++  G  RSL+ +G+AA +A + HQ GL  LA+ G A+ L P ++  S+      RRV  G  A   F +V   +G+PYLLVHG    +++   G      G+   S+GG  L+F  RP +F  L+ AF GYDP
Sbjct:   10 NRRGLAFLALVIVLPLSLRLAPIGHGLPR-NYIPDTHLVKNSLGMARDRDPVPEVGEYSTYPNLLPYILLPVYAAHYGLGLATERWSDAAEYGEVLLANPGEVHLLARLLLALMGAAVPWVLYRAARRAGLGGGAYGAAFLGATALLAIQFSTQERPWGALVLATALACWGTISYLEGGRGRSLIMAGVAAGLAFACHQAGLGILALAGFAYLLGPGASSASWAGIFSPRRVALGLAAGAAFALVGILLGHPYLLVHGSTPAESVVGGGAVEAAGGI---SVGGMSLLFDLRPETFTRLSRAFFGYDP 313          
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Match: A0A2E5X591_9BACT (PMT_2 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X591_9BACT)

HSP 1 Score: 228 bits (580), Expect = 2.060e-66
Identity = 134/312 (42.95%), Postives = 171/312 (54.81%), Query Frame = 0
Query:    7 RRALIALLLLGLLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHMAADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDYLRANPWRAHRLARVLFALIASLTPLFVYLGCRAAGLRQGAWVAAWLAATSLLLVHLSLHERPWAPMMAPLAACLWGAIVHMRTGSLRSLLGSGLAAAIAGSMHQGGLFFLAITGMAWALAPSSAVGSFL------------RRVRGGFLAVLLFIVVAGAVGYPYLLVHG--DALQVAGDTHLPPGLVSFSLGGQRLVFQFRPASFPELAGAFVGYDP 304
            +R L  L L+ +LP  LRLWPI+H  P   ++PDTHLV+N+L MA DR+ +P  G+YSTYP LL Y+L+P YA  +  G +   W D A YG+ L ANP   H LAR+L AL+ +  P  +Y   R AGL  GAW AA+L AT LL +  S  ERPW  ++   A   W AI ++  G  RSLL  GLAA +A + HQ GL  LA+   AW L P+   G               RR+  G  AV  F +    +G+PYLLVHG   A  V G           S+GG  L+F  R  +F  L  AF GYDP
Sbjct:   11 KRGLAFLALVVVLPLALRLWPIDHGLPR-NYIPDTHLVKNSLGMARDRNPVPQVGEYSTYPNLLPYLLLPVYAGHFGLGLATERWRDAADYGEELLANPGEVHLLARILLALMGAAVPWVLYRAGRRAGLGAGAWGAAFLGATGLLAIQFSTQERPWGALVLATALACWAAISYLEGGRSRSLLACGLAAGLAFACHQAGLGILALAAFAWLLGPAERPGQGSTSGPWPLVLLSPRRILLGLAAVAAFALAGFILGHPYLLVHGATPAESVVGGAAAGDA-GGLSVGGMSLIFDLRAETFTRLTRAFFGYDP 320          
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Match: A0A518D1Q2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D1Q2_9BACT)

HSP 1 Score: 210 bits (535), Expect = 7.210e-60
Identity = 134/318 (42.14%), Postives = 173/318 (54.40%), Query Frame = 0
Query:    8 RALIALLLLGLLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHMAADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDYLRANPWRAHRLARVLFALIASLTPLFVYL-----------GCRAAGLRQG-------AWVAAWLAATSLLLVHLSLHERPWAPMMA-PLAACLWGAIVHMRTGSLRSLLGSGLAAAIAGSMHQGGLFFLAITGMAWALAPSS--AVGSFLRRVRGGFLAVLLFIVVAGAVGYPYLLVHGDALQVAGDTHLPPGLVSFSLGGQRLVFQFRPASFPELAGAFVGYDP 304
            + L+ LL +  L A LRL+ I H  P  E+VPDTH+VR AL MA ++ L+PP+G+YSTYPYLL Y L+P YA  Y  G++ G W     +G  +   P R HR AR+L AL+  L PL  YL             RA+    G       A   A+LAAT LL VH S+ ERPW P+ A  L AC W A  ++RTG L +L+ + +  A A + HQ GL  L I G+AW   P    +      R+  G +AV  F +VA AVGY   LVHG    +AG+  L       SLGGQ +V   R AS   L+ A +GYDP
Sbjct:    2 KRLLPLLAILALAAGLRLFGIGHGFPRTEYVPDTHIVRGALGMAQEKSLVPPAGRYSTYPYLLPYALLPIYAGQYGLGRATGEWGGAEEFGQRILLEPERVHRPARILVALLGLLLPLAAYLVLVERRVDGAAADRASPPPLGEDRERCTALFGAYLAATCLLAVHFSVQERPWGPVTAFGLLAC-WPAARYLRTGRLGALVATAVLGAAAAASHQAGLPMLGIAGLAWLFGPRGFRSKDDVSTRLVHGAVAVAAFALVAVAVGYNAALVHGAPEAIAGEDDLSGPEADLSLGGQSIVLDIRWASLARLSKAMIGYDP 318          
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Match: A0A2D6HIR5_9BACT (PMT_2 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HIR5_9BACT)

HSP 1 Score: 209 bits (532), Expect = 1.070e-59
Identity = 129/307 (42.02%), Postives = 167/307 (54.40%), Query Frame = 0
Query:    1 PRARTGRRALIALLLLGLLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHMAADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDYLRANPWRAHRLARVLFALIASLTPLFVYLGCRAAGLRQGAWVAAWLAATSLLLVHLSLHERPWAPMMAPLAACLWGAIVHMRTGSLRSLLGSGLAAAIAGSMHQGGLFFLAITGMAWALAPSSAVGSFL-RRVRGGFLAVLLFIVVAGAVGYPYLLVHGDALQVAGDTHLPPGLVS-FSLGGQRLVFQFRPASFPELAGAFVGYDPA 305
            P+ R     L  L++L +LP FLRL  ++H  P   +VPDTH VR AL MA DRD IPP  +YSTYP L+ Y+LV  + A +  G   G W+    + +++ A P   H LAR+L AL  +LTP  V    R  GL++GAWVAAWL    +L VH S+ ERPW P++  +A  LW A  + RT  +R+L   G A  +A + HQ GL  L I   AW  AP       L RR   G   V  F +VA  +G+PYLLVHG          +  G  S FS+GGQ ++  FR  S      A  GYDPA
Sbjct:    3 PKDRPRTLTLAGLVVLFVLPLFLRLAAVDHGLPR-NYVPDTHAVRAALGMARDRDPIPPVARYSTYPNLMPYMLVGVFGAHFAFGCVDGSWSGAEEFAEHVLAEPAGVHLLARLLVALFGALTPWIVLRVAREVGLKRGAWVAAWLVGVGVLHVHFSVQERPWIPLVFFMALALWPASAYQRTPRVRTLGACGAACGLAFATHQAGLATLGIGAFAWLAAPVGWRARDLGRRASHGLACVTAFGLVALLLGHPYLLVHGSTPSAG----VVGGAASDFSVGGQGILLAFRWESVGRQLAAAFGYDPA 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93573.23366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A518EXA9_9BACT6.520e-8247.12Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D5XNC6_9BACT5.470e-7949.67Uncharacterized protein n=2 Tax=Planctomycetes bac... [more]
A0A518BJ82_9BACT1.760e-7346.60PMT_2 domain-containing protein n=1 Tax=Planctomyc... [more]
A0A7C8CWL4_9BACT5.630e-6944.52PMT_2 domain-containing protein n=1 Tax=Planctomyc... [more]
A0A800G2S4_9BACT6.680e-6947.06PMT_2 domain-containing protein n=2 Tax=cellular o... [more]
A0A2D5WAF0_9BACT3.890e-6743.83PMT_2 domain-containing protein n=1 Tax=Planctomyc... [more]
A0A2E5X591_9BACT2.060e-6642.95PMT_2 domain-containing protein n=1 Tax=Planctomyc... [more]
A0A518D1Q2_9BACT7.210e-6042.14Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D6HIR5_9BACT1.070e-5942.02PMT_2 domain-containing protein n=1 Tax=Planctomyc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 221..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 158..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..254
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..305
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..137
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.796
NoneNo IPR availableTMHMMTMhelixcoord: 141..158
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 9..28
NoneNo IPR availableTMHMMTMhelixcoord: 207..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93573contigP-canaliculata_contig93573:246..1160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93573.23366.1mRNA_P-canaliculata_contig93573.23366.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93573 246..1160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93573.23366.1 ID=prot_P-canaliculata_contig93573.23366.1|Name=mRNA_P-canaliculata_contig93573.23366.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=305bp
PRARTGRRALIALLLLGLLPAFLRLWPIEHSAPHPEFVPDTHLVRNALHM
AADRDLIPPSGKYSTYPYLLSYVLVPAYAADYLAGKSQGLWADGAGYGDY
LRANPWRAHRLARVLFALIASLTPLFVYLGCRAAGLRQGAWVAAWLAATS
LLLVHLSLHERPWAPMMAPLAACLWGAIVHMRTGSLRSLLGSGLAAAIAG
SMHQGGLFFLAITGMAWALAPSSAVGSFLRRVRGGFLAVLLFIVVAGAVG
YPYLLVHGDALQVAGDTHLPPGLVSFSLGGQRLVFQFRPASFPELAGAFV
GYDPA
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