prot_P-canaliculata_contig93562.23363.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93562.23363.1
Unique Nameprot_P-canaliculata_contig93562.23363.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length193
Homology
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BLAST of mRNA_P-canaliculata_contig93562.23363.1 vs. uniprot
Match: D8LHY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHY9_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 3.850e-7
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 0 
Query:    1 DVLRLCDAFELRPCLLSTSEILDAFSSVVSPGVLGLTDEGGGNCKQFSAQIPDLQRRPAKG 61
            DV+R CD+FELRP L+ST EILDA+ ++  PGVLGL+DE  G             ++P KG
Sbjct: 2242 DVIRFCDSFELRPGLVSTREILDAYKTIAFPGVLGLSDEDIGYSNVGGVSNASDTKKPRKG 2302
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93562.23363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHY9_ECTSI3.850e-749.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93562contigP-canaliculata_contig93562:315..1154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93562.23363.1mRNA_P-canaliculata_contig93562.23363.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93562 313..1154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93562.23363.1 ID=prot_P-canaliculata_contig93562.23363.1|Name=mRNA_P-canaliculata_contig93562.23363.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=193bp
DVLRLCDAFELRPCLLSTSEILDAFSSVVSPGVLGLTDEGGGNCKQFSAQ
IPDLQRRPAKGTAEVEEVAKLQSSKSMGVESEGSRRRDTARYNAASDTAY
RRTSTTTSSNIGSREERNVYLGKAQRFPLRRIGLRLSTSNDLAVKIPGAS
YHSNLGRTKTSQQSATYSASTERRSSQKDFESKEGDAIKPPTA
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