prot_P-canaliculata_contig93518.23359.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93518.23359.1
Unique Nameprot_P-canaliculata_contig93518.23359.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length104
Homology
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BLAST of mRNA_P-canaliculata_contig93518.23359.1 vs. uniprot
Match: M1W1W8_CLAP2 (Uncharacterized protein n=1 Tax=Claviceps purpurea (strain 20.1) TaxID=1111077 RepID=M1W1W8_CLAP2)

HSP 1 Score: 98.6 bits (244), Expect = 1.090e-22
Identity = 57/108 (52.78%), Postives = 71/108 (65.74%), Query Frame = 0 
Query:    1 MTLDRAVVDVKSRGFPRPLGLLYVALSRVRRLQDLMFFTDITLDDLQPRVSMQVERRLMDEQRRRSQVLMPPLHGAPVQTPG----RHLDFSRALPDRSTPRQRTRDG 104
            MTLD A+VD+K+RG PRPLGLLYVALSRVRRL+ L  F DI LDD++P V+  +E R +DE+ R  QVL+PPL     +TP     R L FS         R+R R+G
Sbjct:  156 MTLDLAIVDLKARGTPRPLGLLYVALSRVRRLEHLAIFADIILDDIRPNVTRALEVRRLDEENRAQQVLLPPLGPPMPRTPDLLTPRPLTFSTGASTGRRERERDREG 263
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BLAST of mRNA_P-canaliculata_contig93518.23359.1 vs. uniprot
Match: M1VVC9_CLAP2 (ATP-dependent DNA helicase n=1 Tax=Claviceps purpurea (strain 20.1) TaxID=1111077 RepID=M1VVC9_CLAP2)

HSP 1 Score: 90.5 bits (223), Expect = 4.050e-19
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 0 
Query:    1 MTLDRAVVDVKSRGFPRPLGLLYVALSRVRRLQDLMFFTDITLDDLQPRVSMQVERRLMDEQRRRSQVLMPPL 73
            MTLD A+VD+K+RG PRPLGLLYVALSRV RL+ L  F DITLDD +P V+  +E R +DE  R  QVL+PPL
Sbjct:  372 MTLDLAIVDLKARGTPRPLGLLYVALSRVWRLEHLTIFADITLDDTRPNVNRALEVRRLDEANRAPQVLLPPL 444
[Close]
BLAST of mRNA_P-canaliculata_contig93518.23359.1 vs. uniprot
Match: M1WIN1_CLAP2 (Uncharacterized protein n=1 Tax=Claviceps purpurea (strain 20.1) TaxID=1111077 RepID=M1WIN1_CLAP2)

HSP 1 Score: 80.9 bits (198), Expect = 4.960e-17
Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 0 
Query:    1 MTLDRAVVDVKSRGFPRPLGLLYVALSRVRRLQDLMFFTDITLDDLQPRVSMQVERRLMDEQRRRSQ 67
            MTLD A+VD+K+RG PRPLGLLYVALSRV RL+ L  F DITLDD++P V+  +E R  DE  R  Q
Sbjct:    9 MTLDLAIVDLKARGTPRPLGLLYVALSRVWRLEHLAIFADITLDDIRPNVTRALELRRQDEANRAPQ 75
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93518.23359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
M1W1W8_CLAP21.090e-2252.78Uncharacterized protein n=1 Tax=Claviceps purpurea... [more]
M1VVC9_CLAP24.050e-1964.38ATP-dependent DNA helicase n=1 Tax=Claviceps purpu... [more]
M1WIN1_CLAP24.960e-1762.69Uncharacterized protein n=1 Tax=Claviceps purpurea... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93518contigP-canaliculata_contig93518:599..910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93518.23359.1mRNA_P-canaliculata_contig93518.23359.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93518 263..910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93518.23359.1 ID=prot_P-canaliculata_contig93518.23359.1|Name=mRNA_P-canaliculata_contig93518.23359.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=104bp
MTLDRAVVDVKSRGFPRPLGLLYVALSRVRRLQDLMFFTDITLDDLQPRV
SMQVERRLMDEQRRRSQVLMPPLHGAPVQTPGRHLDFSRALPDRSTPRQR
TRDG
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