prot_P-canaliculata_contig93487.23354.1 (polypeptide) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig93487.23354.1 vs. uniprot
Match: A0A518BDC1_9BACT (ECF RNA polymerase sigma factor SigW n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BDC1_9BACT) HSP 1 Score: 113 bits (282), Expect = 4.120e-24 Identity = 98/310 (31.61%), Postives = 148/310 (47.74%), Query Frame = 0
Query: 4 GERALSGPDGRYVLGHNPPGEFQVEARADGYFDGAVEGLELRLREDSFGADLVLDDAPFISGVVVDQDGAPIAGQRVWAWPVVASGHSRPKAADTGPDGRFRVGAVGPQAHDLQAGRRGYVQTGAQREGRVRAHPGDEDVRVVLRRMANHTILVLDDATDEPIEQFGITVLKGDGARARSIARGRRPPPIEEHASGQVELPVRVDDDGILVVATGYRRHAQ---RFAFDEGSSTTRTIRLK----KSPI--LTGRVLSGDRPIAGAAVVLESKQWLGGR---LPDPS--VFISDGAVPSSAESGADGRFS 299
G+ S DG + L G +E RA+G F A + LR + G ++ L+ + G VD+ G P+AG RV PV SR A +GPDG+F + + + L+ G+ ++ E PG +RV L A+ V+DDAT +PIE+FG+ V KG G+ G PP++++ G+ R + D ++V A GY R S ++T+RL+ + P+ +TGRVL P+A A V LE +W+ R L D S VF+S G+ + ADG F+
Sbjct: 430 GDTTTSAEDGSFRLDRVSLGPDALEVRAEG-FPIAEADITLRASSVTAGVEVRLEPEASLRGQAVDRLGQPVAGARVELDPVDEDDISR---AVSGPDGQFELPFLWLEGAHLRVDAEGFDLWDSE-EWDQEFEPGAGAIRVELNPAASVEFSVVDDATGQPIERFGLAVHKGAGSEGMQPV-GDTEPPLQDYPGGRAVAGAREEYDEVVVCAEGYERFQDDVLTVGISGESLRSQTVRLRPFQAQPPVGSITGRVLRDGAPLANAFVELEGGKWMTERMKRLTDQSGDVFMSTGSSLPLVRTSADGSFT 733
BLAST of mRNA_P-canaliculata_contig93487.23354.1 vs. uniprot
Match: A0A7Y4SWE5_9BACT (Carboxypeptidase regulatory-like domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4SWE5_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 1.660e-7 Identity = 67/265 (25.28%), Postives = 117/265 (44.15%), Query Frame = 0
Query: 5 ERALSGPDGRYVLGHNPPGEFQVEARADGYFDGAVEGLELRLREDSFGADLVLDDAP---FISGVVVDQDGAPIAGQRVWAWPVVASGHSRPKAADTGPDGRFRVGAVGPQAHDLQAGRRGYVQTGAQREGRVR-AHPGDEDVRVVLRRMANHTILVLD-DATDEPIEQFGITVLKGDGARARSIARGRRPPPIEEHASGQVELPVRVDDDGILVVATGYRRHAQRFAFDEGSSTTRTIRLKKSPILTGRVLSGDRPIAGAAVVL 264
++A + DG + + PPG + + AR + + ++R+ E++ +LVL+ P I+G+V+D DGAP+AG R+ A V + +GRF + + L+ + G+ E V G +V + L RM + V++ D T P+E FG ++ G+ + G RP P G + + + + A G+ + D+ T + ++ I +GRV SG P+ GA V L
Sbjct: 170 DQARAAEDGTFRIVGLPPGRYGIWARCEASWWATTSAFDVRVAEETTVPELVLEPLPPQHCIAGLVLDPDGAPVAGARIEASSVEMRVDCSNHGTSSDAEGRFHLHVLPLSCGPLKVS--AESEDGSFSEVEVSPVEAGQRNVVLQLGRMRELVVRVVEPDGT--PVESFGWSLTIETGSSF--MTSGARPEP---RPGGLATIRFSRAIEELSIEAPGFEEQDVQVGPDDRVITVTLSKGARTEI-SGRVTSGAWPVGGAHVDL 424
BLAST of mRNA_P-canaliculata_contig93487.23354.1 vs. uniprot
Match: UPI001CD02DA1 (carboxypeptidase-like regulatory domain-containing protein n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CD02DA1) HSP 1 Score: 61.2 bits (147), Expect = 1.060e-6 Identity = 81/315 (25.71%), Postives = 131/315 (41.59%), Query Frame = 0
Query: 12 DGRYVLGHNPPGEFQVEARADGYFDGAVEGLELRLREDSFGADLVLDDAPFISGVVVDQDGAPIAGQRVWAWPVVASGHSRPKAADTGPD---GRFRVGAVGPQAHDLQAGRRGYVQTGAQREGRVRAHPGDEDVRVVLRRMANHTILVLDDATDE-PIEQFGITVL-------KGDGA---RARSIARGRRPPPIEEHASGQVELPVRVDDDGILVVATGYRRHAQRFAFDEGSSTTRTIRLKKSPILTGRVLSGD-RPIAGAAVVLESKQWLGGRLPDPSVFISDGAVPS-SAESGADGRFSIPIVGGGEHRL 310
DGRY +G PG ++ + + GY + E E L + DL L A +SGVVVD++G+P+A R+ DT GRF + A G A DL+ + ++ R+ D+RV+LRR A V+ TDE + Q ++V +G+ + AR+ ++GR + G+ + + D DG+ R A+ +R L+G V+ G P+A A + +++ L P IS G +G DGRF++ + G + L
Sbjct: 393 DGRYRVGPMEPGTYEFDIKRSGYVEVLSE--EHELEQGGKPVDLTLRRAAIVSGVVVDEEGSPVADIRLQLDRSSEDSEESSPRGDTATSDAQGRFSLDAPGAGAWDLRIDDKRFISQ------RLSIQAPASDLRVILRRGAT----VVGTVTDEHAVAQASVSVTLWVEVTEQGEASSVRHARTDSQGRFT--LRGLRPGRFMVEAKADQDGME------RATAKPVELRGTEQAAVALRFTAGRTLSGIVVDGHGEPVADAFI--QAQAPLRAAPPWRRHVISCGTGRDMGVHTGPDGRFTLKHLVEGTYEL 685
BLAST of mRNA_P-canaliculata_contig93487.23354.1 vs. uniprot
Match: A0A4Y6BEW5_MYXXA (Uncharacterized protein n=2 Tax=Myxococcus xanthus TaxID=34 RepID=A0A4Y6BEW5_MYXXA) HSP 1 Score: 57.4 bits (137), Expect = 1.890e-5 Identity = 43/143 (30.07%), Postives = 69/143 (48.25%), Query Frame = 0
Query: 35 FDGAVEGLELRLREDSFGADLVLD--DAPFISGVVVDQDGAPIAGQRVWAWPVVASGHSRPKAADTGPDGRFRVGAVGPQAHDLQAGRRGYVQTGAQREGRVRAHPGDEDVRVVLRRMANHTILVLDDATDEPIEQFGITVLK 175
F G + E ++ GA+ VL+ AP++ G+V D+ P++G RV A + G S P A ++G DGRFR+G +GP HD GY+ T +R+ + L R T + + DA P +T+++
Sbjct: 336 FHGGMTASEQVTLDERDGAETVLELKPAPYLEGLVQDEARQPVSGARVSAI-IKRHGSSHPDA-ESGLDGRFRLGPLGPDTHDFMVSAPGYLDTLVN----LRSSTNTSSATITLFRATTITGVAV-DAHGSPAPGVALTLMR 471 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93487.23354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-canaliculata_contig93487.23354.1 ID=prot_P-canaliculata_contig93487.23354.1|Name=mRNA_P-canaliculata_contig93487.23354.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=312bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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