prot_P-canaliculata_contig93479.23353.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93479.23353.1
Unique Nameprot_P-canaliculata_contig93479.23353.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length313
Homology
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BLAST of mRNA_P-canaliculata_contig93479.23353.1 vs. uniprot
Match: A0A353B0F9_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353B0F9_9PLAN)

HSP 1 Score: 186 bits (473), Expect = 1.440e-51
Identity = 110/315 (34.92%), Postives = 186/315 (59.05%), Query Frame = 0 
Query:    1 YEQRIELAKKLLEPVRFKATTDLGS-DERKSSFVQHWAEIDPAWTAKFILENPVTQTGSPDEWLLYDDSAIRALLTRPTDIEKSDLLKLIDYEGSRLTSAGYAEIAIDNLPAENTELKEKIIKLGTAALPKDYSE-RPTNFGIQIKLAKKSSDPAVLKRVEERVNNFYKSGEALNLWNSMKEGEHFKTNREFFQSVFTRFAPEAYREKFGAKPSSFSNNDIYVLVHDEFITLESKRKQLQQINTFSFGDQPNDHISAAGRLGLIATIDCELALKWAEQAPAEHVKIWSKLAIAPSLNRKNPAAARQMIRECYDQI 313
            YEQRIEL + +LEP+R +A  D     +R  SF+Q +A+IDPAWTA FILENP     +P++ +LYD++AI AL+   T++    + +LID   ++      A  A+ +LP +  EL+ ++I  G  +  K   +  PT F    +LA+ SSD  + +RV E++  ++ SG+ L L   ++       NR  + ++   FAPE          S+ ++     ++ ++ ++ + KR +L Q++ +SFG Q ++ ++AA +LG +A +D +LALKWA QAP    +IW+KL IAP++ + +  AA +M+ ECY+++
Sbjct:   40 YEQRIELVRTILEPIRSEAEEDASELRQRHPSFLQFYADIDPAWTANFILENP-----NPNKQILYDNNAIMALMKHATELSPDVIRQLID--AAQFMRGTAALNALKSLPEDQLELRNRVIAWGLESDEKGNGQIYPTMFAALRELAELSSDATIQQRVREQIAEYFHSGKYLELLKGIEPH-----NRAAYFAMQGPFAPEGISGLGAETDSADAHLLASTILRNDQLSEDEKRSKLAQVSKYSFGTQSHERLNAASQLGTVAVLDWKLALKWAGQAPDVASRIWAKLTIAPAMAKDDSQAAAEMVMECYEEL 342
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93479.23353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A353B0F9_9PLAN1.440e-5134.92Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93479contigP-canaliculata_contig93479:193..1131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93479.23353.1mRNA_P-canaliculata_contig93479.23353.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93479 193..1131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93479.23353.1 ID=prot_P-canaliculata_contig93479.23353.1|Name=mRNA_P-canaliculata_contig93479.23353.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=313bp
YEQRIELAKKLLEPVRFKATTDLGSDERKSSFVQHWAEIDPAWTAKFILE
NPVTQTGSPDEWLLYDDSAIRALLTRPTDIEKSDLLKLIDYEGSRLTSAG
YAEIAIDNLPAENTELKEKIIKLGTAALPKDYSERPTNFGIQIKLAKKSS
DPAVLKRVEERVNNFYKSGEALNLWNSMKEGEHFKTNREFFQSVFTRFAP
EAYREKFGAKPSSFSNNDIYVLVHDEFITLESKRKQLQQINTFSFGDQPN
DHISAAGRLGLIATIDCELALKWAEQAPAEHVKIWSKLAIAPSLNRKNPA
AARQMIRECYDQI
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