prot_P-canaliculata_contig93402.23351.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93402.23351.1
Unique Nameprot_P-canaliculata_contig93402.23351.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length45
Homology
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: A0A1W5D4Z4_9LECA (G-protein beta wd-40 repeats containing (Fragment) n=1 Tax=Lasallia pustulata TaxID=136370 RepID=A0A1W5D4Z4_9LECA)

HSP 1 Score: 62.8 bits (151), Expect = 1.380e-11
Identity = 24/38 (63.16%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    2 LQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDIS 39
            LQTL GH+ +VNS+ FSPDGKQ+ SGSDD T+++WD++
Sbjct:    5 LQTLEGHSDQVNSVAFSPDGKQLASGSDDETVRIWDVA 42          
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: UPI0016850559 (ribosome assembly protein 4 n=2 Tax=Calothrix TaxID=1186 RepID=UPI0016850559)

HSP 1 Score: 65.5 bits (158), Expect = 2.990e-11
Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 ELQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDIS 39
            ELQTL+ H S VNS+ FSPDG+Q+ SGSDD T+KLWD+S
Sbjct: 1182 ELQTLSDHNSSVNSVTFSPDGQQLASGSDDNTIKLWDVS 1220          
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: A0A384JE54_BOTFB (NACHT domain-containing protein n=2 Tax=Botryotinia fuckeliana TaxID=40559 RepID=A0A384JE54_BOTFB)

HSP 1 Score: 65.1 bits (157), Expect = 4.090e-11
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    2 LQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDIS 39
            LQTL GH S VNS+ FSPDGKQ+VSGSDD T++LWD +
Sbjct:  823 LQTLEGHASSVNSVAFSPDGKQVVSGSDDNTVRLWDTA 860          
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: UPI001F548E2B (hypothetical protein n=1 Tax=Aulosira sp. FACHB-615 TaxID=2692777 RepID=UPI001F548E2B)

HSP 1 Score: 65.1 bits (157), Expect = 4.090e-11
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 ELQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDIS 39
            E+ TL GH S+VNS+ FSPDGK + SGSDD T+KLWDIS
Sbjct:  410 EVNTLEGHNSRVNSVSFSPDGKTLASGSDDKTIKLWDIS 448          
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: A0A2S7PPD4_9HELO (NACHT domain-containing protein n=1 Tax=Rutstroemia sp. NJR-2017a BBW TaxID=2070414 RepID=A0A2S7PPD4_9HELO)

HSP 1 Score: 63.9 bits (154), Expect = 1.050e-10
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    2 LQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDIS 39
            LQTL GHTS VNS+ FSPDGKQ+VSGS+D T++LWD +
Sbjct:  771 LQTLEGHTSIVNSVTFSPDGKQVVSGSEDRTVRLWDTA 808          
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: A0A3E2HPG6_SCYLI (NACHT domain-containing protein (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2HPG6_SCYLI)

HSP 1 Score: 63.9 bits (154), Expect = 1.050e-10
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    2 LQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDIS 39
            LQTL GH   V+S+ FSPDGKQIVSGSDD+T++LWD+S
Sbjct:  752 LQTLEGHLDGVSSVAFSPDGKQIVSGSDDSTVRLWDVS 789          
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: A0A2S7Q0R5_9HELO (HET-E protein n=1 Tax=Rutstroemia sp. NJR-2017a BBW TaxID=2070414 RepID=A0A2S7Q0R5_9HELO)

HSP 1 Score: 63.5 bits (153), Expect = 1.190e-10
Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    2 LQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDIS 39
            LQTL GHT  VNS+ FSPDGKQ+VS SDD+T++LWD++
Sbjct:    2 LQTLEGHTDLVNSVAFSPDGKQVVSRSDDSTVRLWDVA 39          
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: A0A094EHD3_9PEZI (Uncharacterized protein n=1 Tax=Pseudogymnoascus sp. VKM F-4513 (FW-928) TaxID=1420907 RepID=A0A094EHD3_9PEZI)

HSP 1 Score: 62.8 bits (151), Expect = 2.670e-10
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    2 LQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDIS 39
            LQTL GH+ +V S+ FSPDG+Q+VSGSDD T++LWDI+
Sbjct: 1377 LQTLEGHSGEVRSVAFSPDGRQVVSGSDDNTVRLWDIT 1414          
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: Q4WH64_ASPFU (NACHT and WD40 domain protein n=2 Tax=Neosartorya fumigata TaxID=746128 RepID=Q4WH64_ASPFU)

HSP 1 Score: 62.8 bits (151), Expect = 2.670e-10
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 ELQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWD 37
            ELQTL GH+S V+S+ FSPDG++IVSGSDD T+KLWD
Sbjct:  906 ELQTLEGHSSWVSSVAFSPDGQRIVSGSDDNTIKLWD 942          
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Match: A0A8H7X3H4_9HELO (NACHT domain-containing protein n=1 Tax=Cadophora sp. M221 TaxID=2774352 RepID=A0A8H7X3H4_9HELO)

HSP 1 Score: 62.8 bits (151), Expect = 2.670e-10
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    2 LQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDIS 39
            LQTL GH+S V S+ FSPDGKQ+VSGSDD T++LWD +
Sbjct:  644 LQTLEGHSSSVRSVAFSPDGKQVVSGSDDKTVRLWDAA 681          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93402.23351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W5D4Z4_9LECA1.380e-1163.16G-protein beta wd-40 repeats containing (Fragment)... [more]
UPI00168505592.990e-1169.23ribosome assembly protein 4 n=2 Tax=Calothrix TaxI... [more]
A0A384JE54_BOTFB4.090e-1171.05NACHT domain-containing protein n=2 Tax=Botryotini... [more]
UPI001F548E2B4.090e-1169.23hypothetical protein n=1 Tax=Aulosira sp. FACHB-61... [more]
A0A2S7PPD4_9HELO1.050e-1071.05NACHT domain-containing protein n=1 Tax=Rutstroemi... [more]
A0A3E2HPG6_SCYLI1.050e-1071.05NACHT domain-containing protein (Fragment) n=1 Tax... [more]
A0A2S7Q0R5_9HELO1.190e-1068.42HET-E protein n=1 Tax=Rutstroemia sp. NJR-2017a BB... [more]
A0A094EHD3_9PEZI2.670e-1065.79Uncharacterized protein n=1 Tax=Pseudogymnoascus s... [more]
Q4WH64_ASPFU2.670e-1072.97NACHT and WD40 domain protein n=2 Tax=Neosartorya ... [more]
A0A8H7X3H4_9HELO2.670e-1068.42NACHT domain-containing protein n=1 Tax=Cadophora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..37
e-value: 2.5E-8
score: 43.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 2..37
e-value: 3.7E-12
score: 46.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 5..39
score: 18.128
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..40
e-value: 3.2E-16
score: 61.5
NoneNo IPR availablePANTHERPTHR19848:SF4E3 UBIQUITIN-PROTEIN LIGASE TRAF7coord: 3..39
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 3..39
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 24..38
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 5..44
score: 15.847
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93402contigP-canaliculata_contig93402:1029..1163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93402.23351.1mRNA_P-canaliculata_contig93402.23351.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93402 1029..1163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93402.23351.1 ID=prot_P-canaliculata_contig93402.23351.1|Name=mRNA_P-canaliculata_contig93402.23351.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=45bp
ELQTLNGHTSKVNSIKFSPDGKQIVSGSDDTTLKLWDISWLSKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf