prot_P-canaliculata_contig93394.23349.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93394.23349.1
Unique Nameprot_P-canaliculata_contig93394.23349.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length223
Homology
BLAST of mRNA_P-canaliculata_contig93394.23349.1 vs. uniprot
Match: A0A518EQV3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EQV3_9BACT)

HSP 1 Score: 211 bits (538), Expect = 4.230e-63
Identity = 111/235 (47.23%), Postives = 155/235 (65.96%), Query Frame = 0
Query:   12 RLRPSSGVTLAELIVATGLAAIVMTSLVSVTGSAVRLWTQGETVRDAREVSTAALSFLVEDLRQLHATSEGDLVVDWFAFDLDRDGVTERMWPRIALVRDVSAAEAN-LQRRTVPDA----------------------LDEDELLAAAGLTREAMALGSGSIRDTEGSAIVEVLYCILPEGSQGDARFTGVLLRQERLHEAGTPRELTEPDAFDSRGRPNLDASREIARGILWL 223
            R R  +G+TLAELI+ATGLAAIVM S++S+  SA+ LWT+GET R  RE S A  S +  DLRQLH ++EGD+++DW  FD+DRDG  ER+WPR+  +RD SA EA  + RR + +A                      L E+E+L AAG++R+ MALG G+  DT  S ++E+LY ++PEG  G  +++G L+R ER+H AG+P  L   DAFDSRG P+   ++E+A G+LW+
Sbjct:   11 RARSQAGMTLAELILATGLAAIVMASMISIVDSALTLWTKGETSRQGREASAAIASMMAHDLRQLHGSAEGDVLIDWEVFDVDRDGQVERLWPRMRFIRDASAREAAWIGRRALAEAARIERDRKRLEAGDDAEVLAEQLSEEEILNAAGVSRQDMALGQGAAVDTSASELLEILYAVVPEGDTGWKKYSGRLVRAERVHRAGSPPVLLRADAFDSRGLPDPTLAKEVATGVLWM 245          
BLAST of mRNA_P-canaliculata_contig93394.23349.1 vs. uniprot
Match: A0A2E6D6L0_9BACT (Uncharacterized protein n=4 Tax=cellular organisms TaxID=131567 RepID=A0A2E6D6L0_9BACT)

HSP 1 Score: 133 bits (335), Expect = 1.720e-33
Identity = 83/209 (39.71%), Postives = 121/209 (57.89%), Query Frame = 0
Query:   18 GVTLAELIVATGLAAIVMTSLVSVTGSAVRLWTQGETVRDAREVSTAALSFLVEDLRQLHATSEGDLVVDWFAFDLDRDGVTERMWPRIALVRDVSAAEA-NLQRRTVPDALDEDELLAAAGLTREAMALGSGSIRDTEG--SAIVEVLYCILPEGSQGDARFTGVLLRQERLHEAGTPRELTEPDAFDSRGRPNLDASREIARGILWL 223
            G T+ EL+VA GLAA++M +L  +  +A+ +WT+GE  R   E   A    L EDLR LH+ ++GDL+VDW  FD+D+DG  +R+WPR+ LVR VS A+   L  R V  AL    +  AA L  +   L     R T    S ++EV + ++P G+   +R  G+L+R E L   G+  +  + D F S GRP + A  E++ G+LWL
Sbjct:   16 GFTMVELMVAAGLAAVLMVALFRLLDTALDMWTRGEDQRLIVERGAATAELLAEDLRSLHSGAQGDLLVDWVNFDVDQDGRVDRVWPRLRLVRSVSMADVVRLSARGVDPAL----VAQAAELGVDVETLIPEDQRPTPAIQSGLMEVAWAVVPVGTDALSRGQGLLMRGEALLAPGSVGKFFKSDFFSSSGRPKVGALEEVSAGLLWL 220          
BLAST of mRNA_P-canaliculata_contig93394.23349.1 vs. uniprot
Match: A0A800MGT4_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800MGT4_9BACT)

HSP 1 Score: 125 bits (314), Expect = 1.120e-30
Identity = 77/210 (36.67%), Postives = 113/210 (53.81%), Query Frame = 0
Query:   18 GVTLAELIVATGLAAIVMTSLVSVTGSAVRLWTQGETVRDAREVSTAALSFLVEDLRQLHATSEGDLVVDWFAFDLDRDGVTERMWPRIALVRDVSAAEANLQRRTVPDALDEDELLAAAGLTREAMALGSGSIRDT----EGSAIVEVLYCILPEGSQGDARFTGVLLRQERLHEAGTPRELTEPDAFDSRGRPNLDASREIARGILWL 223
            G+TL EL+ A+ LAA ++T LV +    + +W +GE  R+  E S   L+ L +DLR LH  S GDLV+DW  FD D DG+ +R+WPR+ +VR V A            AL   +LL  +   R+A  +GS    D     + + ++EV++ +LP   + D   TG+LLR ERL +  T         F+S G P   +  E+  G+LWL
Sbjct:    9 GMTLVELLTASLLAAFIITGLVRLLDLTLDMWAKGEVRREGLERSNTVLALLADDLRSLHGASSGDLVIDWQPFDHDGDGLPDRVWPRLRMVRQVGAG-----------ALQRLQLLELSDNERQAFGMGSTLAADALPLPDPTGLIEVVWAVLPSDQRADP--TGILLRGERLLDDETRDSFLAEKFFNSSGLPPAGSLVEVGGGVLWL 205          
BLAST of mRNA_P-canaliculata_contig93394.23349.1 vs. uniprot
Match: A0A523PPW4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PPW4_9BACT)

HSP 1 Score: 106 bits (265), Expect = 8.930e-24
Identity = 64/182 (35.16%), Postives = 95/182 (52.20%), Query Frame = 0
Query:   44 SAVRLWTQGETVRDAREVSTAALSFLVEDLRQLHATSEGDLVVDWFAFDLDRDGVTERMWPRIALVRDVSAAEANLQRRTVPDALDEDELLAAAG---LTREAMALGSGSIRDTEGSAIVEVLYCILPEGSQGDARFTGVLLRQERLHEAGTPRELTEPDAFDSRGRPNLDASREIARGILW 222
            +++RLW++GE  R   E ++   +    DLR LH  ++GD +V+W  FD+D DG  ER+WPR+ LVR  SAAE  + R+         +L+A  G    T  A    +G+      S ++EV + ILP G    A   GVL R E+L+          P  FD+R  P + A  E++ G+LW
Sbjct:   10 TSLRLWSRGEVQRSLTEQASVVAAIFAHDLRSLHNGAQGDFLVEWAQFDVDADGAFERVWPRVRLVRQASAAELAILRKR--------DLVAQQGPEDATEPAAKSPTGATGRAMRSGLIEVCWAILPAGKA--APHEGVLWRGEQLYGRLDRTSYFAPGFFDARNEPPVGALNEVSGGLLW 181          
BLAST of mRNA_P-canaliculata_contig93394.23349.1 vs. uniprot
Match: A0A2D5W9Z0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W9Z0_9BACT)

HSP 1 Score: 107 bits (266), Expect = 9.220e-24
Identity = 72/220 (32.73%), Postives = 106/220 (48.18%), Query Frame = 0
Query:   18 GVTLAELIVATGLAAIVMTSLVSVTGSAVRLWTQGETVRDAREVSTAALSFLVEDLRQLHATSEGDLVVDWFAFDLDRDGVTERMWPRIALVRDVSAAEANLQRR-TVPDALDEDELLAAAGLTREAMALGSGSIRDTEGSAIVEVLYCILP-------------EGSQGDARFTGVLLRQERLHEAGTPRELTEPDAFDSRGRPNLDASREIARGILWL 223
            G TL E+++A GL +++M ++  +   ++ LW +GET R+  + +T+A   L +DLR L A + GD++ +W  FD D DG+ E+ WPR+ LVR   A EA L+RR   PD                          D  G  ++EV + +LP               S  D R  GVL R ERL +        EP  F   GRP   A  E++ G+LW+
Sbjct:   16 GFTLVEVVLALGLFSMLMVAVFQLLQGSLDLWNRGETRRNIVDQATSAGELLAQDLRALAAGASGDVLAEWVPFDTDGDGLREKYWPRLRLVR--QATEAELRRRGAAPD--------------------------DLHGPGLLEVAWAVLPMTTPQEAGVGGDLHSSPADKRAEGVLWRGERLPDDPLGMSFFEPGFFSRNGRPAGGALEEVSGGLLWM 207          
BLAST of mRNA_P-canaliculata_contig93394.23349.1 vs. uniprot
Match: A0A2E5X389_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X389_9BACT)

HSP 1 Score: 101 bits (252), Expect = 8.550e-22
Identity = 74/227 (32.60%), Postives = 107/227 (47.14%), Query Frame = 0
Query:    6 HLFLRARLRPSSGVTLAELIVATGLAAIVMTSLVSVTGSAVRLWTQGETVRDAREVSTAALSFLVEDLRQLHATSEGDLVVDWFAFDLDRDGVTERMWPRIALVRDVSAAEANLQRRTVPDALDEDELLAAAGLTREAMALGSGSIRDTEGSAIVEVLYCILP----EGSQGD-----ARFTGVLLRQERLHEAGTPRELTEPDAFDSRGRPNLDASREIARGILWL 223
            H FL    R   G TL E+I+A GL +++M ++  +   ++ LW + ET R+  + +T+A   L +DLR L   + GDL+ +W  FD D DG+ E+ WPR+ LVR   A EA L R                         G  +  D  G  ++EV + +LP     GS        AR  GVL R +RL +        EP  F   GRP   A  E++ G+LW+
Sbjct:    4 HRFLPGTERRRRGFTLVEVILALGLFSMLMVAVFQLLQGSLDLWNRSETRRNLVDQATSAGELLAQDLRALAGGAHGDLLAEWVPFDTDGDGLREKYWPRLRLVR--QATEAELLR-------------------------GGMTPADLHGPGLLEVAWAVLPLVDASGSSSKSGGSTARAEGVLWRGDRLPDDPLGMSFFEPGFFARSGRPAGGALEEVSGGLLWM 203          
BLAST of mRNA_P-canaliculata_contig93394.23349.1 vs. uniprot
Match: A0A2D6HAM3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HAM3_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 3.960e-21
Identity = 72/215 (33.49%), Postives = 104/215 (48.37%), Query Frame = 0
Query:   10 RARLRPSSGVTLAELIVATGLAAIVMTSLVSVTGSAVRLWTQGETVRDAREVSTAALSFLVEDLRQLHATSEGDLVVDWFAFDLDRDGVTERMWPRIALVRDVSAAEANLQRRTVPDALDEDELLAAAGLTREAMALGSGSIRDTEGSAIVEVLYCILPEGSQGDARFTGVLLRQERLHEAGTPRELTEPDAFD-SRGRPNLDASREIARGILWL 223
            RAR  P +G+TL EL++ATGL  ++M ++ S+   ++ LW + ET R   E +   L  L  DL  L   + GD++V+W  FD D DG+ E  WPR+ +VR  SAAE  + R T   A DE+   AAA L                     EV +   P     DAR  G+  R  RL    T R   +P  F+ +   P+     ++  G+LW+
Sbjct:    7 RARRTPRAGLTLVELVLATGLLTLLMIAVFSLLDGSLDLWRRAETRRHLSEHAGGFLELLATDLGSLEPGAGGDVLVEWVRFDADGDGLAETGWPRLRMVRQASAAE--VARLT---AGDEEPSTAAATL---------------------EVCWAFTPAPGDADARAEGIAWRGARLALDDTRRTFFDPGFFNVTSHEPDAGELEDVTGGLLWV 195          
BLAST of mRNA_P-canaliculata_contig93394.23349.1 vs. uniprot
Match: A0A521KZK2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KZK2_9BACT)

HSP 1 Score: 95.5 bits (236), Expect = 1.380e-19
Identity = 67/206 (32.52%), Postives = 102/206 (49.51%), Query Frame = 0
Query:   18 GVTLAELIVATGLAAIVMTSLVSVTGSAVRLWTQGETVRDAREVSTAALSFLVEDLRQLHATSEGDLVVDWFAFDLDRDGVTERMWPRIALVRDVSAAEANLQRRTVPDALDEDELLAAAGLTREAMALGSGSIRDTEGSAIVEVLYCILPEGSQGDA-RFTGVLLRQERLHEAGTPRELTEPDAFDSRGRPNLDASREIARGILW 222
            G+TL EL++A GLA++++ +LV +  +++ LW + E  R   E+S+A    L  DL  + +   GDL+V+W  FD+D DG+      R+ LVR  SA E  ++R  V                 +A  LG G         ++EV + +LP  + G    + GVL R  RL+  G    L +P  F S GRP      E+  G+LW
Sbjct:    9 GLTLIELVLALGLASLLVLALVKLIDTSMTLWRKTEERRSQNEMSSAVTELLASDLAAVESGPRGDLLVEWAPFDVDGDGIATLPCLRLRLVRAASAGE--IERLQVAS---------------DAPVLGQG---------LLEVCWALLPASTAGARLEWDGVLWRGVRLYGPGAGLSLLDPRFFSSSGRPASGVLEEVTGGVLW 188          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93394.23349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A518EQV3_9BACT4.230e-6347.23Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E6D6L0_9BACT1.720e-3339.71Uncharacterized protein n=4 Tax=cellular organisms... [more]
A0A800MGT4_9BACT1.120e-3036.67Uncharacterized protein n=2 Tax=Planctomycetes bac... [more]
A0A523PPW4_9BACT8.930e-2435.16Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D5W9Z0_9BACT9.220e-2432.73Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E5X389_9BACT8.550e-2232.60Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D6HAM3_9BACT3.960e-2133.49Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A521KZK2_9BACT1.380e-1932.52Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93394contigP-canaliculata_contig93394:389..1153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93394.23349.1mRNA_P-canaliculata_contig93394.23349.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93394 389..1153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93394.23349.1 ID=prot_P-canaliculata_contig93394.23349.1|Name=mRNA_P-canaliculata_contig93394.23349.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=223bp
MRLSQHLFLRARLRPSSGVTLAELIVATGLAAIVMTSLVSVTGSAVRLWT
QGETVRDAREVSTAALSFLVEDLRQLHATSEGDLVVDWFAFDLDRDGVTE
RMWPRIALVRDVSAAEANLQRRTVPDALDEDELLAAAGLTREAMALGSGS
IRDTEGSAIVEVLYCILPEGSQGDARFTGVLLRQERLHEAGTPRELTEPD
AFDSRGRPNLDASREIARGILWL
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