prot_P-canaliculata_contig93379.23347.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93379.23347.1
Unique Nameprot_P-canaliculata_contig93379.23347.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length109
Homology
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: UPI000414707D (SDR family oxidoreductase n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000414707D)

HSP 1 Score: 149 bits (375), Expect = 8.740e-42
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSVLD 108
            YPTKI+ NQN PSAALK+R++ D+++AYP+FT  MG+R+   G +ADPMDIPRAIA AI +PQGTRPLRIALHP AKPQE INKVSA+ QL +LG SP G  VK VLD
Sbjct:  226 YPTKIWSNQNAPSAALKARLTDDILNAYPQFTQGMGKREAG-GGEADPMDIPRAIAAAIARPQGTRPLRIALHPVAKPQEAINKVSAQMQLAVLGGSPMGDIVKGVLD 332          
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: UPI0016793072 (SDR family oxidoreductase n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016793072)

HSP 1 Score: 139 bits (351), Expect = 3.460e-38
Identity = 67/108 (62.04%), Postives = 87/108 (80.56%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSVLD 108
            YPTKI+ NQ  P+AALKSR+S D++ AYP+FT  MG+  G+ G ++DPMDIPRAIA  I  P+G+RPLR+ALHP A+PQE INKVSA+ Q+ +LG SP GP++K+VLD
Sbjct:  228 YPTKIWENQAKPTAALKSRLSDDMLAAYPQFTAGMGKV-GSGGGESDPMDIPRAIARTIAMPKGSRPLRVALHPVARPQEMINKVSAQTQIAVLGKSPYGPSIKAVLD 334          
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: A0A8J3CT83_9PROT (Short-chain dehydrogenase/reductase n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CT83_9PROT)

HSP 1 Score: 130 bits (328), Expect = 9.030e-35
Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSVLD 108
            YPTKI+ NQ  P++ LKSR+  D++ AYP+ T  MG  +GN G  +DPMDIP AIA  I  P G+RPLRIALHP A+PQE IN VSA+ QL +LG+SP GP++K+VLD
Sbjct:  228 YPTKIWTNQITPTSELKSRLPDDILTAYPQLTAGMGT-EGNGGGDSDPMDIPHAIAKTIAMPIGSRPLRIALHPVARPQEMINTVSAKTQLAVLGNSPFGPSIKAVLD 334          
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: A0A371BFB8_9SPHN (SDR family NAD(P)-dependent oxidoreductase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A371BFB8_9SPHN)

HSP 1 Score: 128 bits (321), Expect = 8.380e-34
Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSVLD 108
            YPTK++VN+N  ++ LK+R++ D  +AYP    +MG+ DG     ADPMD+PRAIA+    P GTRPLR A+HPG KPQE INKVSAE QL MLG+SP GP VK+V D
Sbjct:  220 YPTKVWVNRNQLASELKARLTADQTEAYPALVDSMGKEDGTR-RSADPMDVPRAIAEIAAMPAGTRPLRRAVHPGTKPQEVINKVSAETQLAMLGNSPFGPWVKAVHD 326          
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: A0A062VQ29_9PROT (Short chain dehydrogenase/reductase family oxidoreductase n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A062VQ29_9PROT)

HSP 1 Score: 127 bits (318), Expect = 2.790e-33
Identity = 64/108 (59.26%), Postives = 76/108 (70.37%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSVLD 108
            YPTKI+      +AALK+R  ++L+DAYP  T  MG+ +   G   DPMDIPRAIA+ I  P+GTRPLR  +HPG KPQE IN VS E QL MLG+SP GPAVK VLD
Sbjct:  229 YPTKIWEKSTARAAALKARTPQELLDAYPEMTAGMGQPNSG-GGTTDPMDIPRAIAEIIAMPRGTRPLRRPVHPGNKPQEAINAVSRETQLAMLGNSPWGPAVKDVLD 335          
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: A0A6G6X6W4_9SPHN (SDR family oxidoreductase n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A6G6X6W4_9SPHN)

HSP 1 Score: 126 bits (317), Expect = 3.630e-33
Identity = 62/106 (58.49%), Postives = 78/106 (73.58%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSV 106
            YPTK++VN+N  ++ LK R+S++   AYP     MG+ DG     ADPMD+PRAIA+ I  P GTRPLR A+HPGAKPQE IN+VSAE Q+ MLG+SP GP VK+V
Sbjct:  224 YPTKVWVNRNQLASELKDRLSEEQAAAYPELVDRMGKEDGTR-RTADPMDVPRAIAEIIAMPPGTRPLRRAVHPGAKPQEAINRVSAETQVAMLGNSPFGPWVKAV 328          
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: A0A6I6L9A8_9SPHN (SDR family oxidoreductase n=1 Tax=Sphingorhabdus lacus TaxID=392610 RepID=A0A6I6L9A8_9SPHN)

HSP 1 Score: 125 bits (313), Expect = 1.420e-32
Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSVLD 108
            YPTK++VN+N  +  LK R+++D   AYP     MG  DG+ G  ADPMD+PRAI + I  P GTRPLR A+HPG KPQE INKVSAE Q+ MLG++P GP +K+V D
Sbjct:  225 YPTKVWVNRNVLAKELKGRITEDQAAAYPALVSRMGLEDGS-GRSADPMDVPRAIGEIIAMPAGTRPLRKAVHPGPKPQEAINKVSAETQVAMLGNTPFGPWIKAVHD 331          
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: A0A553WH74_9SPHN (SDR family oxidoreductase n=1 Tax=Sphingorhabdus contaminans TaxID=1343899 RepID=A0A553WH74_9SPHN)

HSP 1 Score: 124 bits (311), Expect = 2.800e-32
Identity = 61/108 (56.48%), Postives = 74/108 (68.52%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSVLD 108
            YPTK++VN+N  +  LK R++ +   AYP     MG  DG  G   DPMD+PRAIAD I  P GTRPLR A+HPG KPQE INKVSAE Q+  LG+SP GP +K+V D
Sbjct:  225 YPTKVWVNRNELAKDLKDRLTAEQAAAYPALVSRMGTEDGT-GRNTDPMDVPRAIADIIAMPAGTRPLRRAVHPGMKPQEAINKVSAETQIAWLGNSPFGPWIKAVHD 331          
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: A0A0N9U9C4_SPHMC (Short-chain dehydrogenase n=1 Tax=Sphingopyxis macrogoltabida TaxID=33050 RepID=A0A0N9U9C4_SPHMC)

HSP 1 Score: 124 bits (310), Expect = 3.790e-32
Identity = 60/108 (55.56%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSVLD 108
            YPT+++ N+N  + ALK R    L+ AY  FT  MGE DG+ G  ADP D+PRAIA+ +  P GTRPLR A+HPGAKPQE INK+S++ QL  LG+SP GP +K+V D
Sbjct:  223 YPTRVWQNRNVYTGALKQRSDAALLAAYEPFTKGMGEEDGS-GRSADPADVPRAIAEIMAMPAGTRPLRRAVHPGAKPQEAINKISSDVQLAWLGESPLGPLIKAVHD 329          
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Match: A0A0W1C2S8_9SPHN (Short-chain dehydrogenase n=2 Tax=unclassified Sphingopyxis TaxID=2614943 RepID=A0A0W1C2S8_9SPHN)

HSP 1 Score: 124 bits (310), Expect = 3.940e-32
Identity = 63/108 (58.33%), Postives = 76/108 (70.37%), Query Frame = 0
Query:    1 YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMDIPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNGPAVKSVLD 108
            YPTK++VN+N  + ALK R    L+ AY  FT  MG  DG+ G  ADP D+PRAIA+ +  P G RPLR A+HPGAKPQE INKV+AE QL  LG+SP GP VK+V D
Sbjct:  225 YPTKVWVNRNIYTGALKDRSDAALLAAYEPFTRGMGTEDGS-GRSADPADVPRAIAEIMAMPAGKRPLRRAVHPGAKPQEAINKVAAEVQLAWLGNSPLGPLVKAVHD 331          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93379.23347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000414707D8.740e-4268.52SDR family oxidoreductase n=1 Tax=Hellea balneolen... [more]
UPI00167930723.460e-3862.04SDR family oxidoreductase n=1 Tax=Litorimonas clad... [more]
A0A8J3CT83_9PROT9.030e-3559.26Short-chain dehydrogenase/reductase n=1 Tax=Algimo... [more]
A0A371BFB8_9SPHN8.380e-3458.33SDR family NAD(P)-dependent oxidoreductase n=2 Tax... [more]
A0A062VQ29_9PROT2.790e-3359.26Short chain dehydrogenase/reductase family oxidore... [more]
A0A6G6X6W4_9SPHN3.630e-3358.49SDR family oxidoreductase n=2 Tax=Sphingomonadales... [more]
A0A6I6L9A8_9SPHN1.420e-3256.48SDR family oxidoreductase n=1 Tax=Sphingorhabdus l... [more]
A0A553WH74_9SPHN2.800e-3256.48SDR family oxidoreductase n=1 Tax=Sphingorhabdus c... [more]
A0A0N9U9C4_SPHMC3.790e-3255.56Short-chain dehydrogenase n=1 Tax=Sphingopyxis mac... [more]
A0A0W1C2S8_9SPHN3.940e-3258.33Short-chain dehydrogenase n=2 Tax=unclassified Sph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93379contigP-canaliculata_contig93379:838..1164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93379.23347.1mRNA_P-canaliculata_contig93379.23347.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93379 838..1164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93379.23347.1 ID=prot_P-canaliculata_contig93379.23347.1|Name=mRNA_P-canaliculata_contig93379.23347.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=109bp
YPTKIFVNQNPPSAALKSRMSKDLIDAYPRFTGNMGERDGNLGNKADPMD
IPRAIADAIVKPQGTRPLRIALHPGAKPQERINKVSAEAQLQMLGDSPNG
PAVKSVLD*
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