prot_P-canaliculata_contig9333.23342.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9333.23342.1
Unique Nameprot_P-canaliculata_contig9333.23342.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length197
Homology
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: A0A6H5K9J2_9PHAE (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J2_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 5.580e-100
Identity = 146/200 (73.00%), Postives = 166/200 (83.00%), Query Frame = 0
Query:    4 MYHEKQYLMHCAVHTLNNLFQEQWATASLMEDIAKELFDRDVSMRKEAGMGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVFNPKDPAAVARSTKNLDPR-SGVRGVVVNRVTLSVLGGLVTGSHYYAIIPWH-----AVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGKC 197
            M+HEKQYLMHCAVHTLNNLFQE WATASLMEDIAKELF+R+ +MRKE+GMG +W+NPYK VVP+VGYYDIN LLEAL LK CHVSLHAVFNPK+P AVA+S ++LDP   GVRG+VVNRV+ S+LGGL T  H+YAIIP+      A     G+ + WYVVDSKA  PE+IG  AELALHLGMEAREHQ HVFVISDGKC
Sbjct:    6 MFHEKQYLMHCAVHTLNNLFQESWATASLMEDIAKELFNREATMRKESGMGRMWVNPYKSVVPQVGYYDINCLLEALNLKKCHVSLHAVFNPKEPNAVAKSLEHLDPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAIIPYKGEWACADNSIGGEGMAWYVVDSKADAPEIIGSAAELALHLGMEAREHQGHVFVISDGKC 205          
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: D8LDY3_ECTSI (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY3_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 5.130e-68
Identity = 102/146 (69.86%), Postives = 121/146 (82.88%), Query Frame = 0
Query:   53 MGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVFNPKDPAAVARSTKNLDPR-SGVRGVVVNRVTLSVLGGLVTGSHYYAIIPWHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGKC 197
            MG +W+NPYK VVP+VGYYDIN LLEALKLK CH+SLHAVFNPK+P AVA+S ++LDP   GVRG+VVNRV+ S+LGGL T  H+YAIIP+  +R   G+ + WYVVDSKA  PE+IG  AELALHLGMEAREHQ HVFV+SDG+C
Sbjct:    1 MGRMWVNPYKSVVPQVGYYDINCLLEALKLKKCHISLHAVFNPKEPNAVAKSLEHLDPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAIIPYKGIR---GNGMAWYVVDSKADAPEIIGSAAELALHLGMEAREHQGHVFVVSDGEC 143          
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: D7FI75_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI75_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 4.210e-42
Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 0
Query:    4 MYHEKQYLMHCAVHTLNNLFQEQWATASLMEDIAKELFDRDVSMRKEAGMGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVFNPKDPAAVARSTKNLDPRSG-VRGVVVNRVTLSVLGGLVTGSHYYAIIPWHAVRFTDGDD 152
            MYHE+Q LM CA+H LNNLFQE WA   LME +A EL +R+ ++R E+G+  L INPYK V+P VG YDINV+LEALKL++C VSLH VFN KDP A   +   +D  S  +RGV+VN V  S+L G     H+YAI+   A    DGDD
Sbjct:    1 MYHERQRLMQCAMHALNNLFQEPWANRELMERLALELGNREATLRSESGLRRLLINPYKSVIPMVGDYDINVVLEALKLRECRVSLHVVFNAKDPTAFELALARVDWDSATIRGVIVNFVCRSLLWGSWVTHHFYAIVK--AKGPGDGDD 148          
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: W7TJE7_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJE7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 7.410e-18
Identity = 71/223 (31.84%), Postives = 108/223 (48.43%), Query Frame = 0
Query:    5 YHEKQYLMHCAVHTLNNLFQEQWATASLMEDIAKELFDRDVSMRKEAGMGSLWINP-------------YKCVVPRVGYYDINVLLEALKLKDCHVSLHAVFNPKDPAAVARSTKNL------------DPRSGVR--GVVVNRVTLS-VLGGLVTGSHYYAIIPWHA-VRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEA---REHQAHVFVISDG 195
            YHE Q  + C  HTLNNL+Q  W   + M+ +A  L   D +   +   GS W+               Y+  VP +G YD++VL+EALK+++    +H + N +    +A     L            D   G R  GV++NR + +     L+ G H+ A+IPW +    + G+ I W+++DSK P P L+GG AE A+    EA    E QA + V + G
Sbjct:   22 YHETQRRLCCGTHTLNNLYQHHWIDTATMDHLASSLGAADKASSGQH-KGSGWLESALRRASDPFAPTAYRSWVPGLGGYDVSVLVEALKMRNARFDMHVLKNGRLEEDLAVLHVRLSGVAGRGPGATEDEGRGERAIGVILNRKSRTWAARWLLEGRHWLALIPWPSGSAASGGEQIRWWMMDSKLPAPVLVGG-AEHAVASVREAVCGEEGQAFLVVEAVG 242          
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: A0A4Y7NN06_9CRUS (Ubiquitinyl hydrolase 1 n=1 Tax=Scapholeberis mucronata TaxID=202097 RepID=A0A4Y7NN06_9CRUS)

HSP 1 Score: 77.8 bits (190), Expect = 1.710e-14
Identity = 62/194 (31.96%), Postives = 97/194 (50.00%), Query Frame = 0
Query:    4 MYHEKQYLMHCAVHTLNNLFQE-QWATASLMEDIAKELFDRDVSMRKEAGMGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVFNPKDPAAVARSTKNLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAIIPWHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGK 196
            +YHEKQ    CA+HTLNNLFQ     T + ++++  +L                WINP++ +   +G YDINV++ AL+LK C +    V+  K     AR        +G  G+++N  + S +G L+     ++   W A+R  +    V+Y +DSK P PE IG V +L  HL     E    +F+++  K
Sbjct:    7 IYHEKQSKQLCALHTLNNLFQNANTFTKAQLDELCLQLTPNS------------WINPHRSMFG-LGNYDINVVMAALQLKQCDL----VWWDKRRKISARDI------NGSFGLILNLPSPSKVGNLIFP---FSTKHWLAIRQFNS---VFYNLDSKLPCPEPIGDVNQLIEHLTKHLNEDDCELFLVNSTK 171          
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: T1J928_STRMM (Ubiquitinyl hydrolase 1 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J928_STRMM)

HSP 1 Score: 78.2 bits (191), Expect = 2.430e-14
Identity = 63/198 (31.82%), Postives = 99/198 (50.00%), Query Frame = 0
Query:    1 MDRMYHEKQYLMHCAVHTLNNLFQEQWA-TASLMEDIAKELFDRDVSMRKEAGMGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVF--NPKDPAAVARSTKNLDPRSGVRGVVVNRVTLSVLGGL---VTGSHYYAIIPWHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVI 192
            +  +YHEKQ    CA+H LNNLFQ   A T  L+++I   L                ++NP+K +   +G YD+NV++ AL+LK+C     A++    KDP+ +            ++G ++N  T   +G +   +   H      W A+R  D    V+Y +DSK  +PELIGG  EL ++L  +   H+  +FVI
Sbjct:    7 LKSIYHEKQVKELCALHALNNLFQNSSAFTKPLLDEICYNLSPNH------------FLNPHKSIFG-LGNYDVNVIMAALQLKNCE----AIWFDKRKDPSCLNFYN--------IQGFILNIPTEYYIGFVKLPIQRKH------WIAIRQVDD---VFYNLDSKLDKPELIGGENELLVYLRQQIDMHEREIFVI 170          
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: A0A3M7SWV4_BRAPC (Ubiquitinyl hydrolase 1 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7SWV4_BRAPC)

HSP 1 Score: 73.9 bits (180), Expect = 7.190e-13
Identity = 56/192 (29.17%), Postives = 100/192 (52.08%), Query Frame = 0
Query:    4 MYHEKQYLMHCAVHTLNNLFQEQWATASLMEDIAKELFDRDVSMRKEAGMGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVFNPKDPAAVARSTKNLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAIIPW---HAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVI 192
            +YHEKQ    CA+H+LNNLFQ+ + T + ++ I  EL  ++            W+NP++ ++ R G Y+IN++++AL L+D      A++  K      R + ++   S ++G ++N  +   +GG +        +PW   H +  +  +D  ++ +DSK  EPELIG   +L L L    +     +F+I
Sbjct:   27 IYHEKQKKELCALHSLNNLFQDNFYTKADLDQICIELCPQE------------WLNPHRGILGR-GNYNINIIIKALHLRDHE----AIWFDK------RRSVSILNLSRIKGFILNIPSDYKIGGFIP-------LPWEKKHWIAVSKIEDF-YFNLDSKLDEPELIGDENKLILFLENLIKSKDKELFII 187          
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: A0A4Y7LS32_9CRUS (Ubiquitinyl hydrolase 1 n=1 Tax=Eubosmina coregoni TaxID=186181 RepID=A0A4Y7LS32_9CRUS)

HSP 1 Score: 72.8 bits (177), Expect = 1.260e-12
Identity = 59/194 (30.41%), Postives = 96/194 (49.48%), Query Frame = 0
Query:    4 MYHEKQYLMHCAVHTLNNLFQEQWA-TASLMEDIAKELFDRDVSMRKEAGMGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVFNPKDPAAVARSTKNLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAIIPWHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGK 196
            +YHEKQ    CA+HTLNNLFQ  +A   S+++D+ ++L              S WINP++ +   +G YDINV++ A+ L D  +    ++  K       +T  +D   G  G ++N  + S +GG+V     +    W A+R       V+Y +DSK   P+ IG   +L  +L     E    +F+++  K
Sbjct:    3 IYHEKQSKQLCALHTLNNLFQNPYAFNKSMLDDLCQQLSP------------STWINPHRSMFG-LGNYDINVIMAAVSLLDYEI----MWWDKRRKI---TTTEVD---GCFGFILNLPSPSRVGGVVLP---FKTKHWLAIRKLKN---VFYNLDSKLETPQSIGDCQQLVHYLSNHLSEEDCELFIVNSTK 167          
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: A0A6J1TJT3_FRAOC (Ubiquitinyl hydrolase 1 n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TJT3_FRAOC)

HSP 1 Score: 74.3 bits (181), Expect = 1.350e-12
Identity = 66/196 (33.67%), Postives = 94/196 (47.96%), Query Frame = 0
Query:    2 DRMYHEKQYLMHCAVHTLNNLFQEQWATASLMEDIAKELFDRDVSMRKEAGMGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVF--NPKDPAAVARSTKNLDPRSGVRGVVVN---RVTLSVLGGLVTGSHYYAIIPWHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVI 192
            + +YHEKQ    CA+H LNNLFQ+Q A         KE FD            + WINP+K ++  +G YDINV++ AL+ K       A++    KDP  +     NL     +RG ++N      L ++  L+   H      W A+R  DG    +Y +DSK   PELIG   EL  +L  +    +  +FVI
Sbjct:   26 NSIYHEKQVRELCALHALNNLFQQQGA-------FTKEEFDEICGSLSP----NTWINPHKSIMG-LGNYDINVIMTALQRK----GYEAIWFDKRKDPKCL-----NLPL---IRGFILNIPGDYKLMLVQMLLRRKH------WVAIREIDGS---YYNLDSKLDSPELIGKGEELLAYLKSQLENKEKELFVI 188          
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Match: A0A813SSD2_9BILA (Ubiquitinyl hydrolase 1 n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813SSD2_9BILA)

HSP 1 Score: 72.8 bits (177), Expect = 1.780e-12
Identity = 54/181 (29.83%), Postives = 94/181 (51.93%), Query Frame = 0
Query:    1 MDRMYHEKQYLMHCAVHTLNNLFQEQWATASLMEDIAKELFDRDVSMRKEAGMGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVFNPKDPAAVARSTKNLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAIIPW---HAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHL 178
            ++ +YHEKQ    CA+HTLNNLFQ+ + T   ++ I  EL  ++            W+NP++ +  R G Y+IN++++AL+L+D      A++  K  +    +  N      ++G ++N  +   + G++        +PW   H V  +   D V+Y +DSK  EPE+IG   +L  +L
Sbjct:   19 LNNIYHEKQKKELCALHTLNNLFQDNFYTKQKLDQICIELCPQE------------WLNPHRGLFGR-GNYNINIIMKALQLRDHE----AIWFDKRRSVTILNFAN------IKGFILNIPSDYKIAGILP-------LPWERKHWVAISRIGD-VYYNLDSKLDEPEIIGDELKLTAYL 168          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9333.23342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9J2_9PHAE5.580e-10073.00Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDY3_ECTSI5.130e-6869.86Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus silicul... [more]
D7FI75_ECTSI4.210e-4254.67Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
W7TJE7_9STRA7.410e-1831.84Ubiquitinyl hydrolase 1 n=2 Tax=Monodopsidaceae Ta... [more]
A0A4Y7NN06_9CRUS1.710e-1431.96Ubiquitinyl hydrolase 1 n=1 Tax=Scapholeberis mucr... [more]
T1J928_STRMM2.430e-1431.82Ubiquitinyl hydrolase 1 n=1 Tax=Strigamia maritima... [more]
A0A3M7SWV4_BRAPC7.190e-1329.17Ubiquitinyl hydrolase 1 n=1 Tax=Brachionus plicati... [more]
A0A4Y7LS32_9CRUS1.260e-1230.41Ubiquitinyl hydrolase 1 n=1 Tax=Eubosmina coregoni... [more]
A0A6J1TJT3_FRAOC1.350e-1233.67Ubiquitinyl hydrolase 1 n=1 Tax=Frankliniella occi... [more]
A0A813SSD2_9BILA1.780e-1229.83Ubiquitinyl hydrolase 1 n=1 Tax=Brachionus calycif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006155Josephin domainSMARTSM01246Josephin_2coord: 8..195
e-value: 4.0E-11
score: 52.9
IPR006155Josephin domainPFAMPF02099Josephincoord: 10..192
e-value: 3.1E-18
score: 66.4
IPR006155Josephin domainPROSITEPS50957JOSEPHINcoord: 1..197
score: 19.028
IPR040053Josephin-1/2PANTHERPTHR13291JOSEPHIN 1, 2coord: 3..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9333contigP-canaliculata_contig9333:8843..11051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9333.23342.1mRNA_P-canaliculata_contig9333.23342.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9333 8843..11051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9333.23342.1 ID=prot_P-canaliculata_contig9333.23342.1|Name=mRNA_P-canaliculata_contig9333.23342.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=197bp
MDRMYHEKQYLMHCAVHTLNNLFQEQWATASLMEDIAKELFDRDVSMRKE
AGMGSLWINPYKCVVPRVGYYDINVLLEALKLKDCHVSLHAVFNPKDPAA
VARSTKNLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAIIPWHAVRFTDG
DDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGKC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006155Josephin
IPR040053JOSD1/2