prot_P-canaliculata_contig9332.23340.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9332.23340.1
Unique Nameprot_P-canaliculata_contig9332.23340.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length230
Homology
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: D8LTE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTE4_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 1.100e-102
Identity = 160/228 (70.18%), Postives = 182/228 (79.82%), Query Frame = 0
Query:    2 ISARTKDAGEKAVTRLTETAPSCQFYFALADLATEEDCSGLVSEAERLMGVIDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSMSSRGRPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVDIHPDMVNNCWG 229
            ISAR++D GEKAV +LTE  PSC+F+F  AD+A EEDCS LVSEA+RLMG IDGLVNCAA T RATLDTTTV+VWDR+MNTNVRGPFLL +AVS+SM S+GRPGSIVNISS VA HGG+PK                          I RVNAINVGW LTDNEH+LQR+EMGS++WI + DKGH MGRLLRPVDIAATVGHLLSDASAM+TGTIVD+HP+MV+NCWG
Sbjct:   64 ISARSQDTGEKAVAQLTEHTPSCRFFFVPADVAKEEDCSRLVSEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVVA-HGGIPKVSTYSVSKAALNACTKMHAYELKRSRI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 289          
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: A0A6H5KWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ8_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 4.410e-79
Identity = 127/180 (70.56%), Postives = 141/180 (78.33%), Query Frame = 0
Query:   50 MGVIDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSMSSRGRPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVDIHPDMVNNCWG 229
            MG IDGLVNCAA T RATLDTTTVEVWDR+MNTNVRGPFLL +AVS+SM S+G PGSIVNISS VA HGG+PK                          I RVNAINVGW LTDNEH+LQR+EMGS++WI + DKGH MGRLLRPVDIAATVGHLLSDASAM+TGTIVD+HP+MV+NCWG
Sbjct:    1 MGCIDGLVNCAAWTARATLDTTTVEVWDRMMNTNVRGPFLLVQAVSKSMRSKGHPGSIVNISSVVA-HGGIPKVSTYSVSKAALNACTKMHAYELKGARI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 178          
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: A0A6V1MI94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MI94_HETAK)

HSP 1 Score: 165 bits (418), Expect = 2.550e-46
Identity = 93/227 (40.97%), Postives = 134/227 (59.03%), Query Frame = 0
Query:    1 MISARTKDAGEKAVTRLTETAPSCQFYFALADLATEEDCSGLVSEAERLMGVIDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSM--SSRGRPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVDIHPDMVN 225
            +I+ R+++ GEK  + +  T  +CQ  + +AD+A E  C+ LV  A    G + GLVN A  T R TL++T    +D ++ TN++GPF LTK  +++M  ++    GS+VNISS +A+H G P                           + RVNA+ +GW LTDNEH +Q +E G D W+ +GD  HP GR+LRPVD+AA  G LLSDA+ MI+G ++D HPD VN
Sbjct:   97 LITCRSEEQGEKVKSYINSTNTNCQAEWMVADVAAEAQCAALVRRALGRFGALHGLVNAAGLTTRGTLESTDEATFDALLATNLKGPFFLTKHAARAMRDTAGASGGSVVNISS-IASHAGAPFISCYSVTKAALNAMTKVHALELQRDRV-RVNALAIGWTLTDNEHKIQLVERGPD-WLEKGDAAHPFGRILRPVDVAAAAGFLLSDAALMISGAVLDQHPDFVN 320          
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: I0I718_CALAS (Putative oxidoreductase n=2 Tax=Caldilinea aerophila TaxID=133453 RepID=I0I718_CALAS)

HSP 1 Score: 154 bits (389), Expect = 9.080e-43
Identity = 88/218 (40.37%), Postives = 121/218 (55.50%), Query Frame = 0
Query:    1 MISARTKDAGEKAVTRLTETAPSCQFYFALADLATEEDCSGLVSEAERLMGVIDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSMSSRGRPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVD 218
            +I  R +  G++    +TE+   C   F  ADLA+ +DC  ++  A+   G IDGLVNCAA+TER ++D  T E+WDR+M  N+R PF L +  ++ M   GR GSIVNI S + AHGG+P                           I RVN INVGWM T NE ++QR E   D+W+   D   P GR+LRP D++  V  LLS   AM++G ++D
Sbjct:   35 IICGRNEQKGQRVAAEITES--GCPTVFVPADLASIDDCRTVIRAADERFGRIDGLVNCAASTERGSVDDATPELWDRIMAINLRAPFFLMQEAARVMRREGRGGSIVNIGS-INAHGGLPNLTVYSTSKGGLMTLTKNAAVVLGADRI-RVNCINVGWMFTPNEDIVQRAEGRGDNWLEVADAQMPFGRILRPPDVSGLVMWLLSAEGAMMSGAVID 248          
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: A0A6V2PCJ6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PCJ6_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.250e-42
Identity = 101/226 (44.69%), Postives = 132/226 (58.41%), Query Frame = 0
Query:    1 MISARTKDAGEKAVTRLTETAPSCQFYFALADLATEEDCSGLVSEAERLM---GVIDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSM-SSRGRPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVDIHPD 222
            ++ +R+K+ GEK    L E   +C   F  ADL   ED S ++++A   M   G I GLVN AATT R  L TTT E +D  M  NVR PFL+++  ++ M  ++ R GSIVNI S VAA GG P                           I RVN +N+GW LT+NE  LQR   G DDW V+ D G P+GR+LRP D+AATVG LLSDASAM+TG+++ +HP+
Sbjct:   48 VLVSRSKEKGEKVCKELEEN--TCVVKFVAADLGNTEDASSVIAKAAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDIQMALNVRAPFLVSQGAAKHMIENKVRGGSIVNICS-VAALGGAPFIMAYSASKAALAAMTKNNAAELAPKGI-RVNGVNMGWCLTENEDKLQRKNSG-DDWAVKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVLSLHPE 268          
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: R1CSP3_EMIHU (Short chain dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CSP3_EMIHU)

HSP 1 Score: 154 bits (388), Expect = 2.490e-42
Identity = 98/224 (43.75%), Postives = 123/224 (54.91%), Query Frame = 0
Query:    2 ISARTKDAGEKAVTRLTETA---PSCQFYFALADLATEEDCSGLVSEAERLMGVIDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSMSSRGRPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVDIHPD 222
            + AR  + G KAV RL   A      + +F  ADL+        V+ A   MG IDG+VN AATT R  L +TT E WD +M  N R PFL+T+A ++ M  +G  GSIVNISS VA  GG P                           I RVN + +GW  TDNE  LQR   G DDW+ + D   P+GR+LRP D+AATV  LLSDAS M+TG +VD+HP+
Sbjct:   47 VIARNAERGTKAVERLQAAAGVQEPFEAFFVEADLSDATGPGKAVALALAAMGAIDGVVNAAATTARGNLASTTAEDWDAMMACNARAPFLITQAATRHMIEKGIRGSIVNISS-VAGKGGAPFLMAYSVSKAAASALTRNNAAELAPHGI-RVNCVEMGWCATDNEDALQRSVKG-DDWLQQADASQPLGRILRPADVAATVCFLLSDASLMMTGNVVDLHPE 267          
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: A0A7S3U3B9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U3B9_9SPIT)

HSP 1 Score: 150 bits (380), Expect = 9.630e-42
Identity = 91/220 (41.36%), Postives = 118/220 (53.64%), Query Frame = 0
Query:    1 MISARTKDAGEKAVTRLTETAPSCQFYFALADLATEEDCSGLVSEAERLMGVIDGLVNCAATT-ERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSMSSRGRPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVDI 219
            ++  R ++ G   V  +    P C   F  AD A  +DC  ++  A +  G +DGLVNCAA    R  L+TTT+E W+ +M  N+ GPFLLTK  + +M   G  GSIVNI S   AHGG P                           I RVN IN+GW  TD E+  Q  E G + W+ E D    MGR+LRP+D AA+V HLLSDASAM+TG ++DI
Sbjct:   15 LVCGRNEERGRAVVEEIKGINPQCDAVFIKADTACADDCQAMIDMAVQRFGRLDGLVNCAAICFPRGNLETTTLEHWENMMRINLTGPFLLTKHAAAAMKKAGNGGSIVNIGSN-CAHGGAPFVMAYSVSKGALQVLTKNNAAELRSAGI-RVNQINMGWCFTDAENAGQVAEKG-EGWLAEADASSDMGRILRPIDTAASVIHLLSDASAMVTGAVLDI 231          
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: A0A7S2HYS1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYS1_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.760e-41
Identity = 101/226 (44.69%), Postives = 128/226 (56.64%), Query Frame = 0
Query:    1 MISARTKDAGEKAVTRLTETAPSCQFYFALADLATEEDCSGLVSEAERLM---GVIDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSMSSRG-RPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVDIHPD 222
            ++ +R++  GEK    L     SC   F  ADL+  ED S +V +A   M   G I GLVN AATT R  L TTT E +D  M  NVR PFL+++ V++ M     + GSIVNI S VAA GG P                           I RVN +N+GW LT+NE  LQR   G DDW  + D G P+GR+LRP D+AATVG LLSDASAM+TG++V +HP+
Sbjct:   46 VLVSRSQAKGEKVCKELQGDDGSCTVAFVSADLSKAEDASAVVPKAAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDMQMALNVRAPFLVSQGVAKHMIENNVKGGSIVNICS-VAALGGAPFIMAYSAAKAALSSMTKNNAAELAPKGI-RVNGVNMGWCLTENEDKLQRQNSG-DDWAEKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVVGLHPE 268          
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: UPI0003F92C1A (SDR family oxidoreductase n=1 Tax=Solirubrobacter soli TaxID=363832 RepID=UPI0003F92C1A)

HSP 1 Score: 146 bits (369), Expect = 7.010e-40
Identity = 83/191 (43.46%), Postives = 113/191 (59.16%), Query Frame = 0
Query:   28 FALADLATEEDCSGLVSEAERLMGVIDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSMSSRGRPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVD 218
            F  A+L   + C  +V+ AER  G +DGLVN A  + R TLD+T+VE+WD +   NVR PF+LT+A +  M   G  GS+VNI + +++HGG P+                          I RVN +N+GW  TD EH++Q  E  S+DW+ E D   P+GRLLRP DIA  V HLLSDA+ MITG+++D
Sbjct:   55 FVPAELQDVDACRAVVAGAERAYGRLDGLVNAAGLSSRGTLDSTSVELWDTLFAINVRAPFVLTQAAAPLMRRAGG-GSVVNIIT-MSSHGGQPELMAYSSSKAALAGFTRNVGNALARDRI-RVNGLNIGWTATDGEHVVQTGEGASEDWLAEADASRPLGRLLRPEDIAPMVTHLLSDAAEMITGSVID 242          
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Match: A0A7S1APH9_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1APH9_NOCSC)

HSP 1 Score: 147 bits (370), Expect = 1.170e-39
Identity = 95/224 (42.41%), Postives = 126/224 (56.25%), Query Frame = 0
Query:    1 MISARTKDAGEKAVTRLTETAPSCQFYFALADLATEEDCSGLVSEAERLMGV-IDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSMSSRG-RPGSIVNISSAVAAHGGMPKXXXXXXXXXXXXXXXXXXXXXXXXXXISRVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAATVGHLLSDASAMITGTIVDIHPD 222
            ++ ART+  GE AV  L+    +C  +F   D+A         + +  ++G  +DGLVN A TTER  L TTT E +D+  + N R PFLLT+A++  +  R  R  SIVNISS +AA GG P                           I RVNAIN+GW +TDNEH L   + G++ W+ E D  HPM RLLRPVD+A TV  LLS AS M+TG ++D+HPD
Sbjct:   53 VLMARTRSRGEAAVAELSNA--TCTAHFVEVDIADAASLQAAAAASFEILGDRVDGLVNAAGTTERGNLMTTTAEGFDKQFDINARAPFLLTQALAVHLKERKLRGASIVNISS-LAAKGGAPFITAYSASKAALNVLTMNNAVELAEHGI-RVNAINMGWTVTDNEHELMVKKAGAE-WLTEADAAHPMKRLLRPVDVACTVCFLLSPASTMMTGNVLDLHPD 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9332.23340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTE4_ECTSI1.100e-10270.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWZ8_9PHAE4.410e-7970.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1MI94_HETAK2.550e-4640.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
I0I718_CALAS9.080e-4340.37Putative oxidoreductase n=2 Tax=Caldilinea aerophi... [more]
A0A6V2PCJ6_9STRA1.250e-4244.69Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
R1CSP3_EMIHU2.490e-4243.75Short chain dehydrogenase n=1 Tax=Emiliania huxley... [more]
A0A7S3U3B9_9SPIT9.630e-4241.36Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S2HYS1_9STRA2.760e-4144.69Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
UPI0003F92C1A7.010e-4043.46SDR family oxidoreductase n=1 Tax=Solirubrobacter ... [more]
A0A7S1APH9_NOCSC1.170e-3942.41Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 126..145
score: 36.93
coord: 187..207
score: 34.64
coord: 51..62
score: 43.57
coord: 99..115
score: 32.76
coord: 148..165
score: 30.2
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 51..62
score: 43.14
coord: 105..113
score: 57.52
coord: 126..145
score: 36.8
NoneNo IPR availableGENE3D3.40.50.720coord: 1..226
e-value: 1.8E-51
score: 176.8
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 7..218
e-value: 1.1E-41
score: 143.0
NoneNo IPR availablePANTHERPTHR24321:SF8DEHYDROGENASES, SHORT CHAINcoord: 3..221
NoneNo IPR availablePANTHERPTHR24321FAMILY NOT NAMEDcoord: 3..221
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 113..141
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9332contigP-canaliculata_contig9332:650..2964 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9332.23340.1mRNA_P-canaliculata_contig9332.23340.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9332 309..3565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9332.23340.1 ID=prot_P-canaliculata_contig9332.23340.1|Name=mRNA_P-canaliculata_contig9332.23340.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=230bp
MISARTKDAGEKAVTRLTETAPSCQFYFALADLATEEDCSGLVSEAERLM
GVIDGLVNCAATTERATLDTTTVEVWDRVMNTNVRGPFLLTKAVSQSMSS
RGRPGSIVNISSAVAAHGGMPKISTYSISKAALNSMTKIHAYELRSARIS
RVNAINVGWMLTDNEHLLQRIEMGSDDWIVEGDKGHPMGRLLRPVDIAAT
VGHLLSDASAMITGTIVDIHPDMVNNCWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR036291NAD(P)-bd_dom_sf