prot_P-canaliculata_contig93216.23333.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93216.23333.1
Unique Nameprot_P-canaliculata_contig93216.23333.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length94
Homology
BLAST of mRNA_P-canaliculata_contig93216.23333.1 vs. uniprot
Match: A0A4S4KRC4_9APHY (ANAPC4_WD40 domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4KRC4_9APHY)

HSP 1 Score: 50.4 bits (119), Expect = 4.170e-5
Identity = 25/78 (32.05%), Postives = 42/78 (53.85%), Query Frame = 0
Query:   15 TTMQLAPDSNTLAIGTDDNRCLLYDFEGRKMLGQVDLKNNKGQITSLAWEADSKTIAIGRSTGVIEILRIKEDNLAGS 92
            T   +A   + +A+G +D +  LYD++G+ +     L NNKG I++LA+  D   +  G S+G I +   KE  +  S
Sbjct:  275 TPSAVAASGSVVAVGGEDQKVRLYDWDGKVLKEVAVLDNNKGSISALAFSHDGSLLVAGDSSGKIILYDAKERKMVNS 352          
BLAST of mRNA_P-canaliculata_contig93216.23333.1 vs. uniprot
Match: A0A4S8MF47_DENBC (WD40 repeat-like protein n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MF47_DENBC)

HSP 1 Score: 50.4 bits (119), Expect = 4.300e-5
Identity = 25/72 (34.72%), Postives = 42/72 (58.33%), Query Frame = 0
Query:   15 TTMQLAPDSNTLAIGTDDNRCLLYDFEGRKMLGQVDLKNNKGQITSLAWEADSKTIAIGRSTGVIEILRIKE 86
            T   +A   +T+AIG +D +  LY+++G+ M   V L  NK  +++LA+  D K +A G S+G I +  + E
Sbjct:  442 TPSAIAASKSTIAIGGEDAKVRLYEWDGKSMNELVVLGENKSLVSALAFSPDGKLLASGDSSGRISLFDVPE 513          
BLAST of mRNA_P-canaliculata_contig93216.23333.1 vs. uniprot
Match: A0A4Y9YDG9_9AGAM (ANAPC4_WD40 domain-containing protein n=2 Tax=Dentipellis TaxID=154746 RepID=A0A4Y9YDG9_9AGAM)

HSP 1 Score: 50.1 bits (118), Expect = 5.870e-5
Identity = 24/77 (31.17%), Postives = 45/77 (58.44%), Query Frame = 0
Query:   10 LDAWATTMQLAPDSNTLAIGTDDNRCLLYDFEGRKMLGQVDLKNNKGQITSLAWEADSKTIAIGRSTGVIEILRIKE 86
            L   AT   +A + + +A+G++D +  LY+++G+ +     L+ NKG +++LA+  D   +A G S+G I +   KE
Sbjct:  431 LKVSATPSAVAANGSQVAVGSEDQKVRLYNWDGKALSEVAVLEGNKGVVSALAFSPDGSKLASGDSSGKIVLFDAKE 507          
BLAST of mRNA_P-canaliculata_contig93216.23333.1 vs. uniprot
Match: A0A8H7NVJ7_9APHY (ANAPC4_WD40 domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NVJ7_9APHY)

HSP 1 Score: 49.7 bits (117), Expect = 7.860e-5
Identity = 21/72 (29.17%), Postives = 42/72 (58.33%), Query Frame = 0
Query:   15 TTMQLAPDSNTLAIGTDDNRCLLYDFEGRKMLGQVDLKNNKGQITSLAWEADSKTIAIGRSTGVIEILRIKE 86
            T   +A    T+A+G +D +  LY+++G+ +     L+ NKG ++++A+  D   +A G S+G I +  +K+
Sbjct:  313 TPSSVAAAGTTIAVGGEDQKVRLYEWDGKALAEAATLEGNKGTVSAVAFSPDGSLLAAGDSSGKIILFDVKK 384          
BLAST of mRNA_P-canaliculata_contig93216.23333.1 vs. uniprot
Match: A0A4Y9ZYW5_9AGAM (ANAPC4_WD40 domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZYW5_9AGAM)

HSP 1 Score: 49.7 bits (117), Expect = 7.930e-5
Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 0
Query:   10 LDAWATTMQLAPDSNTLAIGTDDNRCLLYDFEGRKMLGQVDLKNNKGQITSLAWEADSKTIAIGRSTGVIEILRIKE 86
            L   A    +A   + +AIGT+D +  LYD++G  +     L+ NKG +++LA+  D   +A G S+G I +   KE
Sbjct:  350 LKTGAAPSAVAAIGSLVAIGTEDQKVRLYDWDGSALTEVALLEGNKGVVSALAFSPDGSKLASGDSSGKIVLFDAKE 426          
BLAST of mRNA_P-canaliculata_contig93216.23333.1 vs. uniprot
Match: A0A4R0R9Z2_9APHY (WD40 repeat-like protein n=1 Tax=Steccherinum ochraceum TaxID=92696 RepID=A0A4R0R9Z2_9APHY)

HSP 1 Score: 49.7 bits (117), Expect = 8.020e-5
Identity = 24/78 (30.77%), Postives = 44/78 (56.41%), Query Frame = 0
Query:   15 TTMQLAPDSNTLAIGTDDNRCLLYDFEGRKMLGQVDLKNNKGQITSLAWEADSKTIAIGRSTGVIEILRIKEDNLAGS 92
            T   +A  S  +A+G +DN+  LYD++G+ +     L+ NKG + ++A+  D   +A G STG I +  +++ +   S
Sbjct:  439 TPSSVAATSTLVAVGGEDNKVHLYDWDGKALKESGVLEGNKGVVGAVAFNPDGNLLAAGDSTGKIVLFDVQKHSTVTS 516          
BLAST of mRNA_P-canaliculata_contig93216.23333.1 vs. uniprot
Match: A0A165CZK4_9APHY (WD40 repeat-like protein n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165CZK4_9APHY)

HSP 1 Score: 49.7 bits (117), Expect = 8.030e-5
Identity = 23/75 (30.67%), Postives = 43/75 (57.33%), Query Frame = 0
Query:   15 TTMQLAPDSNTLAIGTDDNRCLLYDFEGRKMLGQVDLKNNKGQITSLAWEADSKTIAIGRSTGVIEILRIKEDNL 89
            T   +A   + +AIG +D +  LYD++G+ +     L+ NKG +++LA+  D   +A G S+G I +  +++  L
Sbjct:  440 TPSAIAAAKSVVAIGGEDQKVHLYDWDGKALSEVATLEGNKGIVSALAFSPDGSLLAAGDSSGKIALFDVRQRKL 514          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93216.23333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A4S4KRC4_9APHY4.170e-532.05ANAPC4_WD40 domain-containing protein n=1 Tax=Herm... [more]
A0A4S8MF47_DENBC4.300e-534.72WD40 repeat-like protein n=1 Tax=Dendrothele bispo... [more]
A0A4Y9YDG9_9AGAM5.870e-531.17ANAPC4_WD40 domain-containing protein n=2 Tax=Dent... [more]
A0A8H7NVJ7_9APHY7.860e-529.17ANAPC4_WD40 domain-containing protein n=1 Tax=Post... [more]
A0A4Y9ZYW5_9AGAM7.930e-533.77ANAPC4_WD40 domain-containing protein n=1 Tax=Heri... [more]
A0A4R0R9Z2_9APHY8.020e-530.77WD40 repeat-like protein n=1 Tax=Steccherinum ochr... [more]
A0A165CZK4_9APHY8.030e-530.67WD40 repeat-like protein n=1 Tax=Laetiporus sulphu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 17..89
e-value: 4.5E-8
score: 33.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..93
e-value: 4.2E-11
score: 44.3
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 11..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93216contigP-canaliculata_contig93216:344..625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93216.23333.1mRNA_P-canaliculata_contig93216.23333.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93216 344..625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93216.23333.1 ID=prot_P-canaliculata_contig93216.23333.1|Name=mRNA_P-canaliculata_contig93216.23333.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=94bp
EKSVKPDGVLDAWATTMQLAPDSNTLAIGTDDNRCLLYDFEGRKMLGQVD
LKNNKGQITSLAWEADSKTIAIGRSTGVIEILRIKEDNLAGSTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024977Apc4_WD40_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf