prot_P-canaliculata_contig93137.23324.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig93137.23324.1
Unique Nameprot_P-canaliculata_contig93137.23324.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length305
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: A0A366VXM6_9GAMM (RNA polymerase sigma-54 factor n=6 Tax=unclassified Psychromonas TaxID=2614957 RepID=A0A366VXM6_9GAMM)

HSP 1 Score: 570 bits (1468), Expect = 6.880e-202
Identity = 282/304 (92.76%), Postives = 296/304 (97.37%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            EVEVVLKR+QHFDPLGVAARTTQECLQIQL+QL ++TPWRDEAI +LE YMDLLGNRDYRTLARKSK KE+QLAEIMRLIQ+LEPRPGN +ETSE QYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMC+GNISK DSQFIKGHLQEAKWFIKSLENRNETLLKV+NCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHV+TNGGGECSSTAIRALIKKLV+ E+TTKPLSDNKITQLLEEKGI+VARRTIAKYRESLGIPPSNQRKQLL
Sbjct:  178 EVEVVLKRIQHFDPLGVAARTTQECLQIQLRQLSETTPWRDEAIQILEQYMDLLGNRDYRTLARKSKLKESQLAEIMRLIQSLEPRPGNRVETSETQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCTGNISKNDSQFIKGHLQEAKWFIKSLENRNETLLKVANCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVATNGGGECSSTAIRALIKKLVSAEITTKPLSDNKITQLLEEKGIKVARRTIAKYRESLGIPPSNQRKQLL 481
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: A0A4Y7ZYH2_9GAMM (RNA polymerase sigma-54 factor n=1 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZYH2_9GAMM)

HSP 1 Score: 558 bits (1437), Expect = 3.570e-197
Identity = 274/304 (90.13%), Postives = 294/304 (96.71%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            EVEVVLKR+QHFDPLGVAAR+TQECLQIQL+QLP +TPWRDEAIL+LE YMDLLGNRDYRTLARKSKFKETQL++IMRLIQ+LEPRPGN +E++E QYI+PDVYVKKINGQWRVSLNQDCDPNLSINQQYA +C+ +ISKTDSQFIKGHLQEAKWFIKSLE+RNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVA EVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHV+T+GGGECSSTAIRALIKKLVA E T KPLSDNKITQLLE++GIQVARRTIAKYRESLGIPPSNQRKQLL
Sbjct:  178 EVEVVLKRIQHFDPLGVAARSTQECLQIQLQQLPSTTPWRDEAILILEQYMDLLGNRDYRTLARKSKFKETQLSDIMRLIQSLEPRPGNRVESTEAQYIIPDVYVKKINGQWRVSLNQDCDPNLSINQQYADLCNSSISKTDSQFIKGHLQEAKWFIKSLESRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVALEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVATDGGGECSSTAIRALIKKLVAAEPTNKPLSDNKITQLLEDRGIQVARRTIAKYRESLGIPPSNQRKQLL 481
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: UPI00036BC986 (RNA polymerase factor sigma-54 n=2 Tax=Psychromonas TaxID=67572 RepID=UPI00036BC986)

HSP 1 Score: 536 bits (1382), Expect = 8.230e-189
Identity = 264/304 (86.84%), Postives = 285/304 (93.75%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            EV+VVLKR+QHFDP+GVAAR+TQECLQIQL+ LP+ TPWR EA++VL+ YMDLLGNRDYRTLARKSK KE QLAE+MRLIQTLEPRPGN IE S+ QYIVPDVYVKKI GQWRVSLN DC+PNLS+NQQYA +C GNISKTDSQFIKGHLQEAKWFIKSLE+RNETLLKVSNCIVQQQQAFFEYG E+MKPMVLNDVAFEVEMHESTISRVTTQKFMHTP GIYELKFFFSSHV+T  GGECSSTAIRALIKKLV  E++TKPLSDNKITQLLEE+GI+VARRTIAKYRESLGIPPSNQRKQLL
Sbjct:  178 EVQVVLKRIQHFDPIGVAARSTQECLQIQLRHLPEQTPWRSEALMVLDLYMDLLGNRDYRTLARKSKLKEAQLAEVMRLIQTLEPRPGNQIEDSQAQYIVPDVYVKKIAGQWRVSLNPDCNPNLSVNQQYADLCKGNISKTDSQFIKGHLQEAKWFIKSLESRNETLLKVSNCIVQQQQAFFEYGHEAMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPTGIYELKFFFSSHVATENGGECSSTAIRALIKKLVNAEISTKPLSDNKITQLLEEQGIKVARRTIAKYRESLGIPPSNQRKQLL 481
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: A0A2N0WWD2_9GAMM (RNA polymerase sigma-54 factor n=2 Tax=unclassified Psychromonas TaxID=2614957 RepID=A0A2N0WWD2_9GAMM)

HSP 1 Score: 532 bits (1370), Expect = 5.490e-187
Identity = 260/304 (85.53%), Postives = 283/304 (93.09%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            E+E VLKR+QHFDP+GVAA++ Q+CLQIQL+ L   TPWR EA+++LE +MDLLGNRDYRTLARK+K KE +LAEIMRLIQTLEPRPGN  E ++ QY+VPDVYVKKI GQWRVSLNQDCDPNLSINQQYA +C GNISKTDSQFIKG+LQEAKWFIKSLE+RNETLLKVSNCIVQQQQAFFEYGDE+MKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHV+T  GGECSSTAIRALIKKLV  ELTTKPLSDNKITQLLEE+GI+VARRTIAKYRESLGIPPSNQRKQLL
Sbjct:  178 EIEAVLKRIQHFDPIGVAAKSAQDCLQIQLRHLSDDTPWRAEALMILEEHMDLLGNRDYRTLARKTKLKENELAEIMRLIQTLEPRPGNQFEDTQAQYVVPDVYVKKIGGQWRVSLNQDCDPNLSINQQYADLCKGNISKTDSQFIKGNLQEAKWFIKSLESRNETLLKVSNCIVQQQQAFFEYGDEAMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVATESGGECSSTAIRALIKKLVNAELTTKPLSDNKITQLLEEQGIKVARRTIAKYRESLGIPPSNQRKQLL 481
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: UPI001EE94AC8 (RNA polymerase factor sigma-54 n=1 Tax=Psychromonas antarctica TaxID=67573 RepID=UPI001EE94AC8)

HSP 1 Score: 530 bits (1366), Expect = 2.230e-186
Identity = 260/304 (85.53%), Postives = 283/304 (93.09%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            E+ VVLKR+QHFDP+G+AAR+TQECLQIQL+QLP  TPW +EA++VLE +MDLLGNRDYRTLARK+K KETQLAE+MRLIQ++EPRPGN IE S+ QYI+PDVYVKKI+GQWRVSLN DCDPNLS+NQ YA MC   ISKTDSQFIKGHLQEAKWFIKSLE+RNETLLKVSNCIVQQQQAFFEYGDE+MKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHV+T  GGECSSTAIRALIKKLV  E+ TKPLSDNKIT LLEE+GIQVARRTIAKYRESLGIPPSNQRKQLL
Sbjct:  178 EILVVLKRIQHFDPVGIAARSTQECLQIQLRQLPPQTPWLNEALMVLELHMDLLGNRDYRTLARKTKLKETQLAEVMRLIQSMEPRPGNQIEDSQAQYIIPDVYVKKISGQWRVSLNPDCDPNLSVNQHYADMCKSKISKTDSQFIKGHLQEAKWFIKSLESRNETLLKVSNCIVQQQQAFFEYGDEAMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVATESGGECSSTAIRALIKKLVNAEVATKPLSDNKITLLLEEQGIQVARRTIAKYRESLGIPPSNQRKQLL 481
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: UPI0003B52625 (RNA polymerase factor sigma-54 n=1 Tax=Psychromonas hadalis TaxID=211669 RepID=UPI0003B52625)

HSP 1 Score: 530 bits (1365), Expect = 3.160e-186
Identity = 257/304 (84.54%), Postives = 284/304 (93.42%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            E+E VLKR+QHFDP+G+AA++TQ+CLQIQL+ L   TPWRDEAI+VLEH+MDLLGNRDYRTLARK+K KE +LA+IMRLIQ+LEPRPGN  E ++ QYIVPDVYVKKI GQWRVSLN DCDPNLSINQQYA +C GNISKTDSQFIKG+LQEAKWFIKSLE+RNETLLKVSNCIVQQQQAFFEYGDE+MKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHV+T  GGECSSTAIRALIKKL++ ELTTKPLSDNKIT LLEE+GI++ARRTIAKYRESL IPPSNQRKQL+
Sbjct:  178 EIEAVLKRIQHFDPIGIAAKSTQDCLQIQLRHLASDTPWRDEAIMVLEHHMDLLGNRDYRTLARKTKLKEPELAQIMRLIQSLEPRPGNQFEDTQAQYIVPDVYVKKIAGQWRVSLNPDCDPNLSINQQYADLCKGNISKTDSQFIKGNLQEAKWFIKSLESRNETLLKVSNCIVQQQQAFFEYGDEAMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVATESGGECSSTAIRALIKKLISTELTTKPLSDNKITLLLEEQGIKIARRTIAKYRESLAIPPSNQRKQLM 481
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: UPI000B9C67E3 (RNA polymerase factor sigma-54 n=1 Tax=Psychromonas sp. CD1 TaxID=1979839 RepID=UPI000B9C67E3)

HSP 1 Score: 495 bits (1274), Expect = 2.130e-172
Identity = 241/304 (79.28%), Postives = 274/304 (90.13%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            E+  VLKR+QHFDP+GVAAR  +ECLQIQL+ L + TPWR EA++V+ +YM LL NRDYRTLARK+K KETQLA+IMRLIQ+LEPRPGN IE+S+ QYIVPDVYVKKI GQW VSLNQ+C+PNL INQ+YA++C G +SKTD+QFIKGHLQEAKWFIKSLE+RNETLLKVSNCIVQQQQ FFE+G E+MKPMVLNDVA+EVEMHESTISRVTTQKFMHTP GIYELKFFFSSHV+T  GGECSSTAIRALIKKLVA E   KPLSDNK+T+ LE +GI+VARRT+AKYRESLGIPPSNQRKQL+
Sbjct:  178 EILAVLKRIQHFDPVGVAARGAKECLQIQLRNLSEDTPWRSEALMVIGNYMHLLANRDYRTLARKTKLKETQLAQIMRLIQSLEPRPGNKIESSQAQYIVPDVYVKKIAGQWCVSLNQECNPNLFINQRYANLCKGKLSKTDNQFIKGHLQEAKWFIKSLESRNETLLKVSNCIVQQQQDFFEFGSEAMKPMVLNDVAYEVEMHESTISRVTTQKFMHTPHGIYELKFFFSSHVATESGGECSSTAIRALIKKLVANEPNNKPLSDNKMTKTLESQGIKVARRTVAKYRESLGIPPSNQRKQLI 481
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: M4U8G0_9GAMM (RNA polymerase sigma-54 factor n=3 Tax=unclassified Psychromonas TaxID=2614957 RepID=M4U8G0_9GAMM)

HSP 1 Score: 491 bits (1263), Expect = 1.030e-170
Identity = 239/304 (78.62%), Postives = 271/304 (89.14%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            E+  VLKR+QHFDP+GVA+R T+ECLQIQL+ L + TPWR EA+++L+ +M LL +RDYRTLARK+K KE QLA IMRLIQ+LEPRPGN IE+S+ QYIVPDVYVKKI  QW VSLNQDCDPNLSINQ YA +C G ISK D+ FIKGHLQEAKWFIKSLE+RN+TLLKVS CIV+QQQ FFE GDE+MKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHV+T  GGECSSTAIRALIKKLVA E   KPLSDNK+T+LL+++GI+VARRT+AKYRESLGIPPSNQRKQL+
Sbjct:  179 EILAVLKRIQHFDPVGVASRGTKECLQIQLRNLSEDTPWRQEALMILDQHMQLLASRDYRTLARKTKLKEAQLAHIMRLIQSLEPRPGNKIESSQAQYIVPDVYVKKIADQWCVSLNQDCDPNLSINQHYADLCKGKISKADNAFIKGHLQEAKWFIKSLESRNDTLLKVSKCIVEQQQDFFELGDEAMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVATESGGECSSTAIRALIKKLVASEPNNKPLSDNKMTKLLDDQGIKVARRTVAKYRESLGIPPSNQRKQLI 482
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: A1SYN1_PSYIN (RNA polymerase sigma-54 factor n=4 Tax=Psychromonas TaxID=67572 RepID=A1SYN1_PSYIN)

HSP 1 Score: 489 bits (1259), Expect = 4.470e-170
Identity = 240/304 (78.95%), Postives = 272/304 (89.47%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            EV VVLKR+QHFDP+GVAAR+TQECLQIQL+ LP+ TPWR EA+ +L H+MDLLGNRDYRTLARKSK KE +LAE++ LIQTLEPRPGN IE S+PQYIVPDVYVKKI GQWRVSL+ D D  LSINQ YA++C GNISK DSQFIKGHLQEA+WFIKSLE+RNETLLKVS+CIV+QQQAFFEYG+ESMKPMVLNDVA EV+MHESTISRVTTQKFMHT RGI+ELKFFFSSHV+T  GGECSSTAI+ALIKKL++ E+++KPLSDNKI  LLE +GI+VARRTI KYRE LGI  S+QRK LL
Sbjct:  181 EVLVVLKRIQHFDPIGVAARSTQECLQIQLRHLPEQTPWRSEALTILAHHMDLLGNRDYRTLARKSKLKEFELAEVLHLIQTLEPRPGNQIENSQPQYIVPDVYVKKIAGQWRVSLHPDSDAKLSINQTYANLCKGNISKADSQFIKGHLQEARWFIKSLESRNETLLKVSHCIVRQQQAFFEYGEESMKPMVLNDVALEVDMHESTISRVTTQKFMHTSRGIFELKFFFSSHVATESGGECSSTAIKALIKKLISAEVSSKPLSDNKIALLLEHQGIKVARRTITKYRELLGISSSSQRKMLL 484
[Close]
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Match: A0A418YI39_9GAMM (RNA polymerase sigma-54 factor n=1 Tax=Motilimonas pumila TaxID=2303987 RepID=A0A418YI39_9GAMM)

HSP 1 Score: 442 bits (1137), Expect = 1.370e-151
Identity = 218/304 (71.71%), Postives = 255/304 (83.88%), Query Frame = 0 
Query:    1 EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHYMDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIVPDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHLQEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFEVEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRALIKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQRKQLL 304
            EVE VLKR+QHFDPLGVAAR+ QEC+ IQL+Q+     WR +AI +++ +MDLL NRDYRTL+R++K KE +L E+MRLI TLEPRPGN I  S+ QYI+PDV V+K +G+W V LN D  P + +N +YA+      +  DSQFI+ HLQEAKWFIKSLE+RN+TLLKVSNCIVQ Q AFFEYGDE+MKPMVLNDVA  VEMHESTISRVTTQK+MHTPRGIYELK+FFSSHV+T+GGGECSSTAIRALIKKLVA E   KPLSD+KITQLL ++GI+VARRTIAKYRESLGIPPSNQRK LL
Sbjct:  179 EVEAVLKRIQHFDPLGVAARSPQECMLIQLQQISPEVKWRQQAIDIIKQHMDLLANRDYRTLSRQTKLKEAELREVMRLIHTLEPRPGNAIVESDAQYIIPDVSVQKKSGRWVVELNPDSVPKIKVNAEYAAFAKQTSNTDDSQFIRSHLQEAKWFIKSLESRNDTLLKVSNCIVQHQIAFFEYGDEAMKPMVLNDVAEAVEMHESTISRVTTQKYMHTPRGIYELKYFFSSHVATDGGGECSSTAIRALIKKLVAAETPAKPLSDSKITQLLADQGIKVARRTIAKYRESLGIPPSNQRKSLL 482
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93137.23324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A366VXM6_9GAMM6.880e-20292.76RNA polymerase sigma-54 factor n=6 Tax=unclassifie... [more]
A0A4Y7ZYH2_9GAMM3.570e-19790.13RNA polymerase sigma-54 factor n=1 Tax=Psychromona... [more]
UPI00036BC9868.230e-18986.84RNA polymerase factor sigma-54 n=2 Tax=Psychromona... [more]
A0A2N0WWD2_9GAMM5.490e-18785.53RNA polymerase sigma-54 factor n=2 Tax=unclassifie... [more]
UPI001EE94AC82.230e-18685.53RNA polymerase factor sigma-54 n=1 Tax=Psychromona... [more]
UPI0003B526253.160e-18684.54RNA polymerase factor sigma-54 n=1 Tax=Psychromona... [more]
UPI000B9C67E32.130e-17279.28RNA polymerase factor sigma-54 n=1 Tax=Psychromona... [more]
M4U8G0_9GAMM1.030e-17078.62RNA polymerase sigma-54 factor n=3 Tax=unclassifie... [more]
A1SYN1_PSYIN4.470e-17078.95RNA polymerase sigma-54 factor n=4 Tax=Psychromona... [more]
A0A418YI39_9GAMM1.370e-15171.71RNA polymerase sigma-54 factor n=1 Tax=Motilimonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000394RNA polymerase sigma factor 54PRINTSPR00045SIGMA54FCTcoord: 13..30
score: 57.52
coord: 219..230
score: 72.79
coord: 277..295
score: 72.76
coord: 203..215
score: 78.28
IPR000394RNA polymerase sigma factor 54TIGRFAMTIGR02395TIGR02395coord: 1..301
e-value: 3.4E-115
score: 383.5
IPR000394RNA polymerase sigma factor 54PANTHERPTHR32248FAMILY NOT NAMEDcoord: 1..303
IPR000394RNA polymerase sigma factor 54PROSITEPS00717SIGMA54_1coord: 191..210
IPR000394RNA polymerase sigma factor 54PROSITEPS00718SIGMA54_2coord: 282..289
IPR007634RNA polymerase sigma factor 54, DNA-bindingPFAMPF04552Sigma54_DBDcoord: 144..302
e-value: 2.5E-69
score: 232.1
IPR007046RNA polymerase sigma factor 54, core-binding domainPFAMPF04963Sigma54_CBDcoord: 1..130
e-value: 1.4E-39
score: 135.8
IPR038709RNA polymerase sigma-54 factor, core-binding domain superfamilyGENE3D1.10.10.1330coord: 1..63
e-value: 9.1E-11
score: 43.5
NoneNo IPR availableGENE3D1.10.10.60coord: 244..301
e-value: 6.4E-24
score: 85.4
NoneNo IPR availablePROSITEPS50044SIGMA54_3coord: 155..281
score: 48.656

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig93137contigP-canaliculata_contig93137:257..1171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig93137.23324.1mRNA_P-canaliculata_contig93137.23324.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig93137 257..1171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig93137.23324.1 ID=prot_P-canaliculata_contig93137.23324.1|Name=mRNA_P-canaliculata_contig93137.23324.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=305bp
EVEVVLKRVQHFDPLGVAARTTQECLQIQLKQLPKSTPWRDEAILVLEHY
MDLLGNRDYRTLARKSKFKETQLAEIMRLIQTLEPRPGNGIETSEPQYIV
PDVYVKKINGQWRVSLNQDCDPNLSINQQYASMCSGNISKTDSQFIKGHL
QEAKWFIKSLENRNETLLKVSNCIVQQQQAFFEYGDESMKPMVLNDVAFE
VEMHESTISRVTTQKFMHTPRGIYELKFFFSSHVSTNGGGECSSTAIRAL
IKKLVAEELTTKPLSDNKITQLLEEKGIQVARRTIAKYRESLGIPPSNQR
KQLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000394RNA_pol_sigma_54
IPR007634RNA_pol_sigma_54_DNA-bd
IPR007046RNA_pol_sigma_54_core-bd
IPR038709RpoN_core-bd_sf