prot_P-canaliculata_contig92735.23257.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig92735.23257.1
Unique Nameprot_P-canaliculata_contig92735.23257.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length393
Homology
BLAST of mRNA_P-canaliculata_contig92735.23257.1 vs. uniprot
Match: A0A7X0LKT4_9BACT (Uncharacterized protein n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0LKT4_9BACT)

HSP 1 Score: 228 bits (581), Expect = 8.690e-66
Identity = 157/406 (38.67%), Postives = 221/406 (54.43%), Query Frame = 0
Query:    1 VDTLTANFFTRLSGGSFSTHTPMVSYVPDLAKAATLFRLGRTYDENLSLVSAPGGVTA--DATDVFVGDELPGIDPDL---AQGLLGAAGGNGRLVTVVTTITKGETATTYDADSILRLPATAVRLATRARGENGQW--VPPLGFSKPGDGG-RTFYPMANNQIMATST-LPAQEIAWHFVVPADREPDFLLIRNTRVYLPAATDAEPAAYAALIGNPARNDGAAVVAVTPRAGRGGDGVAITAEPSAFADHKAIYIEESDRLPTNVSKNNAQFLTYN----ETAVVSGEGMAQKGSASRNTTLTTVEVSPALRAVRVEMAPVTAANDFSALGQGAGTANIQEIWLSDSGGTNFRPFGYVLLKGDGRQKFNVLSGGELRNNVDLPLNDYDNSDRLYVYWAVSPGVT 393
            VD++TANF+ RLS G+F T TP+  Y PD+AKAA + RL + YD N SLV +P  V+   +   +F  D +PGI  +     +G    A G+ +LV + TT TKG+ A TYD+DSILR+P T VRL   +    G W  V P+GFS+P   G   FY + N+ I A++   P+ +I W F +    +P + ++RNTR  LP A   +   +  L+G  A      V A TP A +G    AIT +P  +A HK + IE +  LP  VSKN AQ LTY+    +  V+ G  +   G+  R  ++  V V+ +L A+R ++        F+    GA  + +Q I L    G  + PF YVL   DGRQ+  V     L +N DLPLN+  + D LYVYW +  GVT
Sbjct:  154 VDSMTANFYNRLSVGAFGTSTPLAYYQPDIAKAAVVHRLAKWYDPNQSLVISPDTVSIKEEGLALFTDDRVPGIGTEANAYLEGRRNVAAGD-KLVMIQTTWTKGDGAATYDSDSILRVPPTQVRLLVDSG--QGPWESVAPIGFSRPDPNGVMQFYAINNSSIFASAAGKPSLDINWVFSLGDRDKPAYAMLRNTRFELPEAKLLDGGDFGPLVGALADPSSVNVGAATP-APKGS--TAITTDPVGYATHKIVAIESTSALPAKVSKNKAQGLTYSKEDGDAEVLGGNTVVGSGAGGRGNSVDRVAVNESLSALRAQI------TKFTPTSIGAAQSTVQPIRLVTVSGDEYFPFAYVLKMSDGRQRIRVEKTDALTSNTDLPLNEMKDGDELYVYWRLERGVT 547          
BLAST of mRNA_P-canaliculata_contig92735.23257.1 vs. uniprot
Match: A0A3C0EPG5_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3C0EPG5_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 5.900e-19
Identity = 123/418 (29.43%), Postives = 185/418 (44.26%), Query Frame = 0
Query:    1 VDTLTANFFTRLSGGSFSTHTPMVSYVPDLAKAATLFRLGRTYDENLSLVSAPGGV------TADATDVFVGDELPGIDPDLAQGLLGAAGGNGRLVTVVTT--ITKGETATTYDA-DSILRLPATAVRLATRARGENG---QWVPPLGFSK-PGDGGRTFYPMANNQIMATSTLP-AQEIAWHFVVPADREPDFLLIRNTRVYLPAATDA-----EPAAYAALIGNPARNDGAAVVAVTPRAGRGGDGVAITAEPSAFADHKAIYIEESDRLPTNVSKNN----AQFLTYNETAVVSGEGMAQKGSASRNTTLTTVEVSPALRAVRVEMAPVTAANDFSALGQGAGTANI--QEIWLSDSGGTNFRPFGYVLLKGDGRQKFNVLSGGE--LRNNVDLPLNDYDNSDRLYVYWAVSPG 391
            VD++++NF+ +LS GSFS  TP+  ++PDL + A  FR+    D N +LV+ PG +      TA        D L GI  +  +       GN R++   T    TK      Y+  DS LR+  T V+L T    +     Q + P+G SK   +G R+F    + Q M   T P A  IA+ F++P  R P  LLIR  RV++P   D+     EP     ++G    +  A     TP  G  G+           +   A  I  S++LP   SKN       + + N+   ++ EG+    + S+   +    V      VRV    V      S LG+   TA +   ++ L D  G+ ++P GY LL+     K  VL   +  LR    LP+ D    + LY+Y+ V  G
Sbjct:  153 VDSMSSNFYAKLSMGSFSNDTPLKKFMPDLVQQAGTFRMH--VDGNATLVAKPGSIELVGSYTAKTPFTATDDTLIGIIGNEIRK------GNHRILVFDTKWLFTKPP----YNGVDSTLRISPTQVQLITYDVNDPDTPTQLIQPIGASKVTEEGQRSFIAFKDAQTMIAGTNPQADTIAFLFIIPQTRAPGDLLIRRQRVHVPDLADSSYIKDEPQ-ITTVLGRLDESQTAVANTDTPEEGSIGN------RQGNVSGMLATEISLSNKLPKQFSKNRYTGPMNYNSDNQILTINAEGVLSHENVSQANAIKEFYVPSHKAMVRVL---VDLDKAQSLLGRSYATAAMVNSQVTLIDDKGSKWQPSGYALLQ---EGKIRVLKDPDHPLRVAKQLPIADMRKGEELYLYFEVDRG 545          
BLAST of mRNA_P-canaliculata_contig92735.23257.1 vs. uniprot
Match: A0A517YXI1_9BACT (Colicin V production protein n=1 Tax=Poriferisphaera corsica TaxID=2528020 RepID=A0A517YXI1_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 2.000e-17
Identity = 116/404 (28.71%), Postives = 178/404 (44.06%), Query Frame = 0
Query:    1 VDTLTANFFTRLSGGSFSTH----TPMVSYVPDLAKAATLFRLGRTYDENLSLVSAPGGVTADATDVFVGD--ELPGIDPDLAQGLLGAAGGN-----GRLVTVVTTITKGETATTYDADSILRLPATAVRLATRARGENGQWVPPLGFSKPGDGGRTFYPMANNQIMATSTLPAQEIAWHFVVPADREPDFLLIRNTRVYLPA--ATDAEPAAYAALIGNPARNDGAAVVAVTPRAGRGGDGVAITAEPSAFADHKAIYIEESDRLPTNVSKNNAQFLTYNETAVVSGEG-MAQKGSASRNTTLTTVEVSPALRAVRVEMAPVTAANDFSALGQGAGTAN-IQEIWLSDSGGTNFRPFGYVLLKGDGRQKFNVLSGGELRNNVDLPLNDYDNSDRLYVYWAVS 389
            VD    N F+ LS GSF+        + +  P+L K   + R  ++ DE  SLV+ P        +V VG   E P  +  L+  +  A G +      RLV V T  T+  +   YD D   R+ A+ VRL T ++G  G    P  FSK     R     A     A  +     IAW FVVP +    F+ +RN R  LP   A + +    A  +G  +  D  A                     +A  +    ++E +++LP +VSKN A+ L+   +A+ SG   + QKGS S  T + T  V      +R+EM P   AN F   GQ   +A+ +  + + D  G+     G+VL +G        ++   +R+  +LP+N  +  D+LYVY+ V+
Sbjct:  153 VDEYAYNVFSFLSRGSFAPTLNRGVNLSTARPELPKMIVINR--QSADERASLVARP-------QEVRVGKVYERPADNTGLSTAVELAIGESLNATGHRLVVVDTKWTQERSGGAYDGDDTFRVSASQVRLIT-SKGLYG----PKAFSKAQGDQRIMTKFARRTDQAWGSDAEDTIAWVFVVPTNEAVKFMQVRNLRFELPKQNAWEEDVDVVAEAVGVLSEADAKAAAXXXXXXXXXXXXXXXXTRSNASGN----WVEVTNKLPRSVSKNFARNLSVQGSAITSGYAEVDQKGSVSSRTKIDTFYVPSHQAMIRIEMTP-DRANSF--FGQAMASASALGMVGVKDDKGSTMPAVGFVLQRGS----HVTIAAKRIRSAKELPVNQMEEGDKLYVYFKVN 531          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig92735.23257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7X0LKT4_9BACT8.690e-6638.67Uncharacterized protein n=1 Tax=Algisphaera agaril... [more]
A0A3C0EPG5_9BACT5.900e-1929.43Uncharacterized protein n=2 Tax=Phycisphaerales ba... [more]
A0A517YXI1_9BACT2.000e-1728.71Colicin V production protein n=1 Tax=Poriferisphae... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig92735contigP-canaliculata_contig92735:1..1179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig92735.23257.1mRNA_P-canaliculata_contig92735.23257.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig92735 1..1179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig92735.23257.1 ID=prot_P-canaliculata_contig92735.23257.1|Name=mRNA_P-canaliculata_contig92735.23257.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=393bp
VDTLTANFFTRLSGGSFSTHTPMVSYVPDLAKAATLFRLGRTYDENLSLV
SAPGGVTADATDVFVGDELPGIDPDLAQGLLGAAGGNGRLVTVVTTITKG
ETATTYDADSILRLPATAVRLATRARGENGQWVPPLGFSKPGDGGRTFYP
MANNQIMATSTLPAQEIAWHFVVPADREPDFLLIRNTRVYLPAATDAEPA
AYAALIGNPARNDGAAVVAVTPRAGRGGDGVAITAEPSAFADHKAIYIEE
SDRLPTNVSKNNAQFLTYNETAVVSGEGMAQKGSASRNTTLTTVEVSPAL
RAVRVEMAPVTAANDFSALGQGAGTANIQEIWLSDSGGTNFRPFGYVLLK
GDGRQKFNVLSGGELRNNVDLPLNDYDNSDRLYVYWAVSPGVT
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