prot_P-canaliculata_contig927.23254.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig927.23254.1
Unique Nameprot_P-canaliculata_contig927.23254.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length179
Homology
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: A0A6H5L915_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L915_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 5.040e-92
Identity = 140/170 (82.35%), Postives = 157/170 (92.35%), Query Frame = 0
Query:    1 KSSGLFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASPVVITALQTFHG 170
            +SSGLFTL VVSYC+G+AL+CERL+LSHEAGALFAGLLM DSPFA+KAHA MQPLTSLFGGMYLGSLGMIV+PA+M+W+FGDVLGCV++LVLIK  +VAMVMKSFGFSWEASTLAGACMAQ+SEISLFFVARA HLKLI R HYL+ VATT+ILMVASP+VI  LQ  HG
Sbjct:   51 QSSGLFTLAVVSYCLGVALVCERLDLSHEAGALFAGLLMVDSPFAQKAHARMQPLTSLFGGMYLGSLGMIVNPAFMVWNFGDVLGCVVMLVLIKLLIVAMVMKSFGFSWEASTLAGACMAQVSEISLFFVARAQHLKLISRHHYLMTVATTVILMVASPLVIKGLQAVHG 220          
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: D7FYX0_ECTSI (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX0_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 6.100e-89
Identity = 143/170 (84.12%), Postives = 158/170 (92.94%), Query Frame = 0
Query:    1 KSSGLFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASPVVITALQTFHG 170
            +SSGLFTLGVVSYC+G+AL+CERLNLSHEAGALFAGLLM DSPFA+KAHA MQPLTSLFGGMYLGSLGMIV+PA+M+W+FGDVLGCV++LVLIK  +VAMVMKSFGFSWEASTLAGACMAQ+SEISLFFVARA HLKLI R HYL+ VATTIILMVASP+VI  LQ  HG
Sbjct:  421 QSSGLFTLGVVSYCLGVALVCERLNLSHEAGALFAGLLMVDSPFAQKAHARMQPLTSLFGGMYLGSLGMIVNPAFMVWNFGDVLGCVVMLVLIKLLIVAMVMKSFGFSWEASTLAGACMAQVSEISLFFVARAQHLKLIRRHHYLMTVATTIILMVASPLVIKGLQAVHG 590          
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: A0A7S2HHK2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHK2_9STRA)

HSP 1 Score: 163 bits (413), Expect = 8.980e-45
Identity = 82/156 (52.56%), Postives = 115/156 (73.72%), Query Frame = 0
Query:    5 LFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASPV 160
            LFTL VV+YC+G++L+ E L LSHEAGALFAGL++ D+P  ++A   ++PLTSLFGGMYL SLGMI+SP +++ H G ++  V ++  +K  VV  VM+SFGF+  AS  AG  +AQ+SE+SLF VARA  L L+ R  YL+ +ATT+ L+  +P+
Sbjct:  270 LFTLAVVTYCLGMSLLSEWLELSHEAGALFAGLVLMDTPHVQRAAQAVEPLTSLFGGMYLASLGMIISPQFLLGHLGAIMSYVFVIYFLKVFVVTFVMRSFGFALAASLAAGVLLAQVSEVSLFLVARAQQLGLVSRHVYLLMLATTVTLLAVAPL 425          
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: A0A7S2WCP4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCP4_9STRA)

HSP 1 Score: 154 bits (389), Expect = 8.750e-43
Identity = 79/168 (47.02%), Postives = 115/168 (68.45%), Query Frame = 0
Query:    5 LFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASPV---VITALQTFH 169
            LFT+ V SYC+GL+L+CE  +LSHEAGAL AGL++ DSP A++    ++PL SLFGG+YL SLGMI+SP +++ H G V+  V ++ L+K  V+  V++   F+  A+   G  MAQISE+SLFF+ARA  L L+ R +YL  +A T+ L+  +P+   V+T +   H
Sbjct:  137 LFTMAVTSYCLGLSLVCEWFDLSHEAGALIAGLVLVDSPHAQRTAQAIEPLASLFGGIYLASLGMIMSPVFLLDHLGPVMAYVAVIYLLKVLVITRVVRGLRFAAAAAMSTGVIMAQISEVSLFFIARAHQLGLVSRKNYLTVLAVTVTLLAVTPLASAVVTRVDRRH 304          
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: W7U641_9STRA (Sodium hydrogen exchanger n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U641_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.780e-42
Identity = 87/165 (52.73%), Postives = 120/165 (72.73%), Query Frame = 0
Query:    2 SSGLFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASPVVITALQ 166
            S  LF LG+V+YC+ ++L+ E + LS+EAGAL AGL++AD P   KA A M+PLT LFGGMYLGSLGMI+SPA++  H G +L CV ++++IK   V++ M+S G+S +AS L    MAQISE+SLF V+RA   KLI R  YL+ VATT++L++ +P    AL+
Sbjct:  503 SLDLFILGLVAYCLLMSLLTEWMGLSYEAGALLAGLIVADVPQVGKAVAVMEPLTCLFGGMYLGSLGMILSPAFLAHHAGTILLCVAVMIVIKVASVSLGMRSLGYSLKASVLGALTMAQISELSLFLVSRAQEYKLISRQVYLMVVATTVVLLMLTPFSSHALK 667          
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: A0A7S2WDJ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDJ5_9STRA)

HSP 1 Score: 154 bits (389), Expect = 7.810e-41
Identity = 79/168 (47.02%), Postives = 115/168 (68.45%), Query Frame = 0
Query:    5 LFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASPV---VITALQTFH 169
            LFT+ V SYC+GL+L+CE  +LSHEAGAL AGL++ DSP A++    ++PL SLFGG+YL SLGMI+SP +++ H G V+  V ++ L+K  V+  V++   F+  A+   G  MAQISE+SLFF+ARA  L L+ R +YL  +A T+ L+  +P+   V+T +   H
Sbjct:  396 LFTMAVTSYCLGLSLVCEWFDLSHEAGALIAGLVLVDSPHAQRTAQAIEPLASLFGGIYLASLGMIMSPVFLLDHLGPVMAYVAVIYLLKVLVITRVVRGLRFAAAAAMSTGVIMAQISEVSLFFIARAHQLGLVSRKNYLTVLAVTVTLLAVTPLASAVVTRVDRRH 563          
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: F0YPR3_AURAN (Na_H_Exchanger domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPR3_AURAN)

HSP 1 Score: 145 bits (367), Expect = 5.710e-39
Identity = 78/165 (47.27%), Postives = 112/165 (67.88%), Query Frame = 0
Query:    2 SSGLFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASPVVITALQ 166
            S   F L VV Y + +AL+ +RL LSHEAGALFAGL++  +P   KA   + PL +LFGGMY+ SLG++ SP Y+  HFG ++G V ++V+IK  VV  ++ + GFS  A+T AG   AQ+SE++LF  ARA HL+L+ R  YL  ++TTI+L+  +P+ I  L+
Sbjct:  161 SDASFGLCVVGYALAMALLGDRLKLSHEAGALFAGLVLVGTPHVDKAKRAVSPLAALFGGMYVASLGLVASPQYVRAHFGAIMGRVTVVVVIKVAVVGPMVYALGFSRAAATGAGFAFAQVSEVALFVAARAHHLQLVTRHTYLDVLSTTIVLLAIAPLFIHVLK 325          
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: A0A7S3XPM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPM7_HETAK)

HSP 1 Score: 134 bits (338), Expect = 6.190e-36
Identity = 74/162 (45.68%), Postives = 106/162 (65.43%), Query Frame = 0
Query:    5 LFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASPVVITALQ 166
            LFTL VV+Y +GLAL  E L LS E GA+ AGLLM  +P+A++A + ++PL SLFGGMYL SLGMI++P Y++ HFG++    L++V +KF    + +K  G    A+  AG  +AQ+SE+ L+   +A    L+GR  YL+A A  + L+ ASP    AL+
Sbjct:   43 LFTLAVVAYVLGLALASEHLQLSLEVGAVAAGLLMTYTPYARQAESTLEPLMSLFGGMYLASLGMIINPRYILAHFGELALWCLVVVAVKFAAAWVALKRLGAGDVAAYAAGFSLAQVSEVGLYLAGKARRRGLLGRHAYLLAAALCVALLAASPFASHALR 204          
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: A0A8J2SYW5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYW5_9STRA)

HSP 1 Score: 138 bits (348), Expect = 9.410e-35
Identity = 76/166 (45.78%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    6 FTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASPVVITALQTFHGR 171
            F L VV Y + +AL+ +RL LSHEAGALFAGL++  +P   +A   + PL +LFGGMY+ SLG++VSP Y+  H   V+  VL +V +K  V A V+ + GFS +A+  AGA  AQ+SE++LF  ARA  L+L+ R  YL  ++TTI+L+  +P+ I  L+    R
Sbjct:  494 FGLCVVGYALAMALLGDRLKLSHEAGALFAGLVLVGTPHVDRAKRAVAPLAALFGGMYVASLGLVVSPRYLQNHASAVVAHVLFVVCVKVAVTAPVVYALGFSKQAAAGAGAVFAQVSEVALFVAARAHELELLARHTYLDVLSTTIVLLAVAPLFIHGLRRVDRR 659          
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Match: A0A7S1ZZG6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZZG6_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.860e-30
Identity = 71/160 (44.38%), Postives = 105/160 (65.62%), Query Frame = 0
Query:    1 KSSGLFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHACMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAMVM-KSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVATTIILMVASP 159
            KS  LFTL VV+Y + +A ICE L LS EAGALFAG+++  SP   K    ++ +TS+FGGM+L S+G I+SPA++M H G ++  V+ + L K  +V++V+ + F +    S   G+ MAQISEISL  +A++  L L+ R  YL+ + TT IL+  +P
Sbjct:  238 KSCELFTLSVVAYALLMATICEELQLSIEAGALFAGIVLIKSPHVPKVLDSIESITSVFGGMFLTSMGTIISPAFVMSHIGTIMLLVVCIGLFKMVLVSIVLNRCFDYGITPSLAVGSAMAQISEISLVVLAKSQRLGLVSRKVYLMLIPTTCILLSLAP 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig927.23254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L915_9PHAE5.040e-9282.35Na_H_Exchanger domain-containing protein n=1 Tax=E... [more]
D7FYX0_ECTSI6.100e-8984.12Na_H_Exchanger domain-containing protein n=1 Tax=E... [more]
A0A7S2HHK2_9STRA8.980e-4552.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WCP4_9STRA8.750e-4347.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U641_9STRA1.780e-4252.73Sodium hydrogen exchanger n=2 Tax=Monodopsidaceae ... [more]
A0A7S2WDJ5_9STRA7.810e-4147.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YPR3_AURAN5.710e-3947.27Na_H_Exchanger domain-containing protein n=1 Tax=A... [more]
A0A7S3XPM7_HETAK6.190e-3645.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2SYW5_9STRA9.410e-3545.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1ZZG6_9STRA1.860e-3044.38Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038770Sodium/solute symporter superfamilyGENE3D1.20.1530.20coord: 1..171
e-value: 3.4E-23
score: 84.1
IPR006153Cation/H+ exchangerPFAMPF00999Na_H_Exchangercoord: 3..163
e-value: 1.3E-17
score: 63.7
NoneNo IPR availablePANTHERPTHR16254POTASSIUM/PROTON ANTIPORTER-RELATEDcoord: 3..164
NoneNo IPR availablePANTHERPTHR16254:SF14TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 3coord: 3..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..81
NoneNo IPR availableTMHMMTMhelixcoord: 112..131
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 83..102
NoneNo IPR availableTMHMMTMhelixcoord: 144..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig927contigP-canaliculata_contig927:23078..25530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig927.23254.1mRNA_P-canaliculata_contig927.23254.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig927 23078..25530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig927.23254.1 ID=prot_P-canaliculata_contig927.23254.1|Name=mRNA_P-canaliculata_contig927.23254.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=179bp
KSSGLFTLGVVSYCVGLALICERLNLSHEAGALFAGLLMADSPFAKKAHA
CMQPLTSLFGGMYLGSLGMIVSPAYMMWHFGDVLGCVLLLVLIKFTVVAM
VMKSFGFSWEASTLAGACMAQISEISLFFVARAVHLKLIGRDHYLVAVAT
TIILMVASPVVITALQTFHGRGVGAGGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038770Na+/solute_symporter_sf
IPR006153Cation/H_exchanger