prot_P-canaliculata_contig9236.23219.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9236.23219.1
Unique Nameprot_P-canaliculata_contig9236.23219.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length229
Homology
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: D8LF51_ECTSI (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF51_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 2.480e-77
Identity = 122/151 (80.79%), Postives = 132/151 (87.42%), Query Frame = 0
Query:   35 VKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTFQSVKRESMEQSLDLDGTELEEFVAANSNVVSTSSD 185
            VKSGTYDFEANKALLKLYQFFPDLC+PE VAL+LAKALMNVPSTDFMAL+YIV P LHR EPV SLKRA DSLETAKFVDFWQTCA+GDMPALIE VPGFKKH+R FIV TLA+TFQ   R++MEQ LDLDG EL  FV AN++VVS S D
Sbjct:    7 VKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPD 157          
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: A0A835Z1S6_9STRA (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S6_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.680e-53
Identity = 96/173 (55.49%), Postives = 118/173 (68.21%), Query Frame = 0
Query:    1 MEFPPSYEAMRPVVEHEYFDHRAVSQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTFQSVKRESMEQSLDLDGTELEEFV 173
            M+ P  + AMRPVVEHEYFDHR V QLE YL EQ  SGTYDFEANKALLKLYQFFPDL K + VAL   KALM +P+ DF AL Y+   A    EP++SL RA D+LE A++  FW    E +  ALI+++PGF    R   +  LA+TFQSV   ++E+++ L G ELE FV
Sbjct:    5 MQLPARHAAMRPVVEHEYFDHRVVPQLEAYLAEQASSGTYDFEANKALLKLYQFFPDLVKADMVALAAGKALMALPAPDFAALSYLAPAAALAAEPLTSLARALDALEGARYGAFWAVTREPEAAALIQRLPGFADQARRVALSALAATFQSVPLSALEEAVALSGAELEAFV 177          
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: A0A7S2FZN4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZN4_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.160e-40
Identity = 84/199 (42.21%), Postives = 122/199 (61.31%), Query Frame = 0
Query:    1 MEFPPSYEAMRPVVEHEYFDHRAVSQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTFQSVKRESMEQSLDLDGTELEEFVAANS---------NVVSTSSDEVSDR 190
            M  P SYE +  +++ + F+  ++ +L+ YL+EQ+ + TYDF ANKALLKLY F+PD    + +AL L KALM +PSTD M L+Y+V  +   +EPV++L R    LETAKFV+FW+    G    L++ V GF + IR +++  L+ TFQ V+ E+    L LD  +LEE+V+AN          NVV T + E   R
Sbjct:    1 MALPASYEEIATLLDEQAFEKSSIEKLQAYLDEQIATETYDFVANKALLKLYSFYPDQASDQYIALALTKALMALPSTDMMLLLYLVPESAQTKEPVATLVRCAVHLETAKFVEFWEVANLGGNE-LLDAVSGFDEAIRSYMIGVLSITFQKVESETFADLLALDEGDLEEYVSANQSDKLSIEGKNVVFTPNSENQQR 198          
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: A0A7S2H0N4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0N4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.750e-34
Identity = 71/174 (40.80%), Postives = 107/174 (61.49%), Query Frame = 0
Query:    1 MEFPPSYEAMRPVVEHEYFDHRAVSQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTFQSVKRESMEQSLDLDGTELEEFVA 174
            ME P S +++   +  +      +  L+EYL EQV++ TYDF ANK L+KLYQF+P+      +AL + K++M +PSTD   L+Y+V   L  +EP+ +L R  D LETA+FV+FW+    G    L++ +PGF + IR F++  L+ TFQ ++ E+    L LD   LEEF+A
Sbjct:    6 MEIPQSAQSIAEKLALDEHSVELIDTLQEYLNEQVQTDTYDFMANKTLMKLYQFYPERSNENCIALAVTKSMMALPSTDLSVLLYLVPETLALKEPIHTLVRCADHLETARFVEFWEVANLGGNE-LLDAIPGFPEAIRSFMIGVLSMTFQKLQSETFLDLLMLDEESLEEFIA 178          
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: A0A7S2WSD7_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD7_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.280e-33
Identity = 70/169 (41.42%), Postives = 101/169 (59.76%), Query Frame = 0
Query:   19 FDHRAVSQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTFQSVKRESMEQSLDLDGTELEEFVAANSNVVSTSSDEV 187
            +D  A+  LE Y+ EQV+  TYDF ANKALLKLYQFFP       VAL+L KALM +PSTD   L+Y+V   +  +EP+ +L R  + LET KFV+FW+    G    L++ + GF + +R++++  L  TFQS++ E     + L    L E+V   S+V+     +V
Sbjct:   23 YDQDAIELLESYVAEQVEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQSLESEVFMDLVALPDEHLAEYVGTKSDVMRLEGKQV 190          
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: A0A7S2SPG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPG3_9STRA)

HSP 1 Score: 120 bits (302), Expect = 7.090e-31
Identity = 62/136 (45.59%), Postives = 88/136 (64.71%), Query Frame = 0
Query:   19 FDHRAVSQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTFQSVK 154
            +D  A+  LE Y+ EQV+  TYDF ANKALLKLYQFFP       VAL+L KALM +PSTD   L+Y+V   +  +EP+ +L R  + LET KFV+FW+    G    L++ + GF + +R++++  L  TFQS++
Sbjct:   23 YDQDAIELLESYVAEQVEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQSLE 157          
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: W7U338_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U338_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.510e-30
Identity = 70/174 (40.23%), Postives = 105/174 (60.34%), Query Frame = 0
Query:    4 PPSYEAMRP-VVEHEYFDHRAVSQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTFQSVKRESMEQSLDLDGTELEEFVAAN 176
            P SY ++   V+    +    V  LEEYL+ QVK G+YDFEANK+LLKLY  +P L   E+V  +L KAL+N+P+TDF  L+YI+   L   E V ++K A ++LETA++ DFW         A+   +P +K  IR+ I+   A+T+++V +  +   + L G EL+ F+ AN
Sbjct:   44 PSSYNSVHSNVLGDGLYTQEKVKHLEEYLQLQVKEGSYDFEANKSLLKLYLLYPPLANNENVETILLKALLNLPATDFTLLLYILPEKLQTDENVLTIKDAAEALETARYADFWSIL--NSRAAVFLAIPEWKDDIRKIILTVHAATYKAVDKAHVSDGVGLSGDELDSFLTAN 215          
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: L8GVU4_ACACA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVU4_ACACA)

HSP 1 Score: 113 bits (282), Expect = 2.760e-27
Identity = 62/153 (40.52%), Postives = 95/153 (62.09%), Query Frame = 0
Query:   23 AVSQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPA-LIEKVPGFKKHIREFIVQTLASTFQSVKRESMEQSLDLDGTELEEFVA 174
            ++ QL+ YL+EQ+   +YDFEAN ALLK++QF P     + V  +L KALMN+P  DF   +Y++  A H+ E V++LK+  + LETA+F  FW    E    + L++  PGF++ I+ F V  L   +QSV  + +  ++ L+G  L+EFVA
Sbjct:   22 SLPQLKAYLQEQIDQRSYDFEANLALLKIFQFNPSHIDIDVVQKVLIKALMNLPHMDFPLSLYVLPEAAHQNEGVAALKKVSNLLETAQFTGFWTLFEEDSATSVLLKNFPGFREAIQSFAVSVLTVAYQSVPVDVLASAVHLNGAALDEFVA 174          
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: A0A7S4ULZ9_GUITH (Eukaryotic translation initiation factor 3 subunit K n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4ULZ9_GUITH)

HSP 1 Score: 112 bits (281), Expect = 3.350e-27
Identity = 57/155 (36.77%), Postives = 95/155 (61.29%), Query Frame = 0
Query:   19 FDHRAVSQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTFQSVKRESMEQSLDLDGTELEEFV 173
            FD     QLE Y++EQ+K G  D +AN ALL+ YQ+ P     E V  +L KALM +P+TDFM  +Y+V P   + + +  LK+  D LET +F ++W   A+    ++   +PGF + IR++IV  +++T+Q + R+ +E  ++L G +L++ +
Sbjct:   14 FDPSITPQLEAYVDEQIKGGYTDLDANLALLRFYQYNPATANSEVVCKILVKALMQMPATDFMLCMYLV-PGAVKEQKIEVLKQLSDKLETCQFKEYWADMADEKNASVANGIPGFHEAIRQYIVGVISATYQVIARDELEILINLKGAQLDQLL 167          
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Match: A0A1X6NQY4_PORUM (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQY4_PORUM)

HSP 1 Score: 108 bits (269), Expect = 2.790e-25
Identity = 62/164 (37.80%), Postives = 97/164 (59.15%), Query Frame = 0
Query:   19 FDHRAVSQLEEYLEEQVKSGTYDFEANKALLKLYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSLKRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTFQSVKRESMEQSLDLDGTELEEFVAANSNVVST 182
            +D   +  LEEY+E+QV +GT D  AN A LKLYQF+P   K   V+ +L KA+M +PSTDF+  +Y++  A    EP+ +L +    LET +F DFW   A G +  L++ VPGF + +R F++  +  T++ V+R  + + L L+G +     AA   V+ +
Sbjct:   23 YDPDILPTLEEYVEQQVATGTNDAMANLATLKLYQFYPATYKTAVVSKILIKAIMALPSTDFLCAMYLIPAATADDEPIPALVQLASMLETGRFEDFWP--ATGAVRQLLDGVPGFDEAVRSFMLVVIGRTYKRVERTVLARLLGLEGVDEAAEEAAVDEVIKS 184          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9236.23219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF51_ECTSI2.480e-7780.79Eukaryotic translation initiation factor 3 k subun... [more]
A0A835Z1S6_9STRA2.680e-5355.49Eukaryotic translation initiation factor 3 k subun... [more]
A0A7S2FZN4_9STRA2.160e-4042.21Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2H0N4_9STRA1.750e-3440.80Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2WSD7_9STRA5.280e-3341.42Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2SPG3_9STRA7.090e-3145.59Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W7U338_9STRA1.510e-3040.23Eukaryotic translation initiation factor 3 subunit... [more]
L8GVU4_ACACA2.760e-2740.52Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4ULZ9_GUITH3.350e-2736.77Eukaryotic translation initiation factor 3 subunit... [more]
A0A1X6NQY4_PORUM2.790e-2537.80Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 123..189
e-value: 1.9E-7
score: 33.1
IPR016020Translation initiation factor 3, subunit 12, N-terminal, eukaryoticGENE3D1.25.40.250coord: 10..119
e-value: 2.2E-31
score: 110.0
IPR033464CSN8/PSMD8/EIF3KPFAMPF10075CSN8_PSD8_EIF3Kcoord: 60..177
e-value: 1.2E-17
score: 64.2
NoneNo IPR availablePANTHERPTHR13022:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Kcoord: 17..179
IPR009374Eukaryotic translation initiation factor 3 subunit KPANTHERPTHR13022EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11coord: 17..179
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 40..226
score: 12.561
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 16..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9236contigP-canaliculata_contig9236:9134..10940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9236.23219.1mRNA_P-canaliculata_contig9236.23219.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9236 9002..10985 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9236.23219.1 ID=prot_P-canaliculata_contig9236.23219.1|Name=mRNA_P-canaliculata_contig9236.23219.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=229bp
MEFPPSYEAMRPVVEHEYFDHRAVSQLEEYLEEQVKSGTYDFEANKALLK
LYQFFPDLCKPESVALMLAKALMNVPSTDFMALVYIVSPALHRREPVSSL
KRAEDSLETAKFVDFWQTCAEGDMPALIEKVPGFKKHIREFIVQTLASTF
QSVKRESMEQSLDLDGTELEEFVAANSNVVSTSSDEVSDRHVEYLGSDLC
LWMSCCVLVLERRRANSSLSSSSTQSPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR016020Transl_init_fac_sub12_N_euk
IPR033464CSN8_PSD8_EIF3K
IPR009374eIF3k
IPR000717PCI_dom
IPR016024ARM-type_fold