prot_P-canaliculata_contig9188.23167.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9188.23167.1
Unique Nameprot_P-canaliculata_contig9188.23167.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length159
Homology
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 4.900e-77
Identity = 129/158 (81.65%), Postives = 144/158 (91.14%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAGGGGADGVGEEARATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYKFFRQPAPL 158
            MLKHYKVPVLLIEFNP+KAFCLLG+GDLT +IKL SITSQLTLLT+HFPQLRILWSKSEHA+ADMFKELMKNNA+VDV KA AAGGGG D  G    A+AKELLMRLPG+NV+N+RNVLR VDTIA+LS+LSEE+LRPLLG  NA+KLYKFFRQPAP+
Sbjct: 1063 MLKHYKVPVLLIEFNPDKAFCLLGSGDLTSEIKLTSITSQLTLLTLHFPQLRILWSKSEHASADMFKELMKNNAAVDVAKAQAAGGGGEDDQGTGDDASAKELLMRLPGVNVYNFRNVLRGVDTIAELSQLSEEQLRPLLGEGNAAKLYKFFRQPAPV 1220          
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A7S3L7V4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7V4_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.370e-41
Identity = 79/170 (46.47%), Postives = 108/170 (63.53%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAGG--------------GGADGVGEE--ARATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYKFFRQ 154
            M +HYK P LLIEF+P K+FCL  + +L  +I+ +S  S+L+LLT+HFP+LRILWS+  H T  +FK+L  N+  VDVEKA   G               GG +G  EE     +A+E+L+RLPG+NVH  R ++ EVDT+A+L+ LS EELR + G     KL+ FF Q
Sbjct:   72 MCRHYKAPCLLIEFDPSKSFCLQNSSELGVEIRADSACSKLSLLTMHFPKLRILWSRGPHETLKIFKDLKMNHEEVDVEKAMEIGRNESVEALLRADKSKGGEEGEEEEDEINESAREMLLRLPGVNVHAARRIMEEVDTLAELALLSREELRKIAGPIVGQKLFTFFHQ 241          
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A067CU23_SAPPC (ERCC4 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CU23_SAPPC)

HSP 1 Score: 156 bits (394), Expect = 3.460e-41
Identity = 80/152 (52.63%), Postives = 104/152 (68.42%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAGGGGADGVGEEARATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYKFF 152
            M++HY+ P+LLIEFNPEK F L   G++T DIK NSITS+L+LL +HFPQLR LWSKS HAT ++F+ + K     DVE A AAG   + G        A ++L +LPGI  HNYR V     T+ADLSK++  +L PLLG +NA KL++FF
Sbjct:  689 MIRHYQTPLLLIEFNPEKPFALQALGEITSDIKHNSITSKLSLLVLHFPQLRFLWSKSPHATVELFRLVKKGQDDPDVEAAMAAGSATSGG-SSFYNMNAVDVLRKLPGITAHNYRKVAANCRTLADLSKMTLADLDPLLGPSNAKKLHRFF 839          
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A1V9ZKY2_9STRA (DNA repair endonuclease XPF n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKY2_9STRA)

HSP 1 Score: 152 bits (384), Expect = 7.760e-40
Identity = 76/152 (50.00%), Postives = 100/152 (65.79%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAGGGGADGVGEEARATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYKFF 152
            M +HY+ P+LLIEFNPEK F L   G++T DIK +SITS+L+LL +HFPQLR LWSKS  AT ++FK++ K +   DVE A A G              A ++L +LPGI  HNYR V   V  +ADLSK++  +L PL+G  NA KL++FF
Sbjct:  675 MTRHYQTPLLLIEFNPEKPFALQEVGEITTDIKHSSITSKLSLLVLHFPQLRFLWSKSPQATVELFKQVKKGHDDPDVEAAVAVGSAAGANSSSFYNMNAVDVLRKLPGITAHNYRKVAAHVTNLADLSKMAVADLEPLVGPTNARKLHRFF 826          
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A8J9TMD7_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TMD7_PHATR)

HSP 1 Score: 148 bits (373), Expect = 8.170e-40
Identity = 76/166 (45.78%), Postives = 110/166 (66.27%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAG------------GGGADGVGEEARATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYKFFRQ 154
            M KHYK P LLIEF+P K+FCL  + +L  +I+  S+ S++ LLT+HFPQLRILWS+S H T  +F+EL  N+  VDVEKA   G             G A+G  +E    A+++L+RLPG+NVH+ R +++E D++A+L+++S +ELR + G     KL+ FFRQ
Sbjct:  261 MSKHYKCPCLLIEFDPTKSFCLQNSNELGVEIRTESVCSKIALLTMHFPQLRILWSRSPHETLRIFRELKTNHDEVDVEKAIDIGRNESPDALLQLPAGLAEGE-DEINEMARDMLLRLPGVNVHSARRIMQECDSLAELAEMSRDELRRIAGPVTGQKLFAFFRQ 425          
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A7S0FGV8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FGV8_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.680e-38
Identity = 71/169 (42.01%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAGGGGA--------------DGVGE-EARATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYKFFRQ 154
            M KHYK P+LLIEF+P K+FCL    D+  DI+ +++ S+++LL +HFP+LRILWS+S H T  +FK L +N+   D++KA   G   +              DG  E E    A+++L+RLPGI V   R ++   DTIADL+++S +EL+ L+G  +  +L+ FFRQ
Sbjct:   22 MCKHYKCPILLIEFDPSKSFCLQSGNDIGGDIRSDAVCSKMSLLALHFPKLRILWSRSPHETLRIFKLLKENHDEPDIDKAIEIGSNESLDTLLGMDPSQEADDGEEENEINEAARDMLLRLPGITVQTARTIMAHCDTIADLAEMSRDELKRLIGPLSGQRLFTFFRQ 190          
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A7S2XSK0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSK0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 9.320e-38
Identity = 77/166 (46.39%), Postives = 103/166 (62.05%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAG------------GGGADGVGEEARATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYKFFRQ 154
            M K+YK P LLIEF+P K F L    +L  DIK +SI S++ LL +HFP+LRILWS+S H T  +FK L  N+  VDVEKA   G            GG  DG   E    A+++L+RLPG+NVH+ R ++   D+IADL+ +S EE++ L+G     KL+ FFRQ
Sbjct:  870 MSKYYKCPCLLIEFDPGKTFSLQNVNELGGDIKTDSICSKMALLVMHFPKLRILWSRSPHETLKIFKALKTNHEEVDVEKAIELGSNESVDALLAGDGGEEDGEENEINEAARDMLLRLPGVNVHHARKIMSACDSIADLANMSREEMKKLVGPVTGQKLFTFFRQ 1035          
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A6U2T7W2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2T7W2_9STRA)

HSP 1 Score: 139 bits (350), Expect = 7.210e-37
Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAG----------GGGADGVGEEARATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYKFFRQ 154
            M KHYK P LLIEF+PEK+F L    +L  DIK +SI S+++LL +HFP+LRILWS+S + T  +FK L  N+   DVEKA   G          GGG     +E    A+++L+RLPGIN +N R ++   D+IA+L+++S ++L+ LLG     KL+ FFR+
Sbjct:  205 MSKHYKCPCLLIEFDPEKSFSLQNVNELGSDIKQDSICSKMSLLLMHFPRLRILWSRSPYETVKIFKSLKVNHGEPDVEKAVEIGSNESIDNLIIGGGEVTDEDEINEAARDMLLRLPGINRNNARRIIDRCDSIAELAEMSRDDLKELLGPLTGQKLFTFFRK 368          
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A4D9D5Y9_9STRA (ERCC4 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Y9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.120e-36
Identity = 76/153 (49.67%), Postives = 105/153 (68.63%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAGGGGADGVGEEAR-ATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGT-ANASKLYKF 151
            ML+ YK   LLIEF  +KAF L   GD+T DI++ +I S+L LLT+HFP LRILWS++ H T  +FK L   NA VDV+KA  AGGG  +   E  R  TA++LL++LPG+ V N+R++++ VD +A LS++S  EL P+L + A A KL+ F
Sbjct:  970 MLRFYKAATLLIEFQDDKAFSLQAPGDITDDIQVTNIVSKLVLLTLHFPALRILWSRNSHQTVLLFKALKAGNAPVDVQKALTAGGGTGEEDSEAGRHLTAQDLLLKLPGVTVSNFRSIMKRVDNLAALSRMSVAELHPILESEAAAKKLHDF 1122          
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Match: A0A1Z5JRX1_FISSO (DNA excision repair protein ERCC-4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRX1_FISSO)

HSP 1 Score: 142 bits (358), Expect = 2.780e-36
Identity = 70/161 (43.48%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    1 MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQLRILWSKSEHATADMFKELMKNNASVDVEKAHAAGGGGAD-------GVGEEARATAKELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYKFFRQ 154
            M+K+YKVP LLIEF+P K+F L  A ++  +I+ +S+ S++ LLT+HFPQLRILWSKS H T  +FK+L KN+  VDV++A   G    +          +E    A+++L+RLPG+N+H+ R +++  D +A+L  +S +ELR + G     KL+ FFRQ
Sbjct:  791 MVKYYKVPCLLIEFDPAKSFSLQNASEIGVEIRTDSVCSKICLLTMHFPQLRILWSKSPHDTLKIFKDLKKNHDEVDVDRAMEIGRNELEDSLFESSSESDEINEVARDMLLRLPGVNIHSARKIMQNCDCLAELCDMSRDELRRVAGPVTGQKLFTFFRQ 951          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9188.23167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEA6_9PHAE4.900e-7781.65ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S3L7V4_9STRA1.370e-4146.47Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A067CU23_SAPPC3.460e-4152.63ERCC4 domain-containing protein n=2 Tax=Saprolegni... [more]
A0A1V9ZKY2_9STRA7.760e-4050.00DNA repair endonuclease XPF n=1 Tax=Achlya hypogyn... [more]
A0A8J9TMD7_PHATR8.170e-4045.78Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S0FGV8_9STRA3.680e-3842.01Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2XSK0_9STRA9.320e-3846.39Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6U2T7W2_9STRA7.210e-3745.12Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A4D9D5Y9_9STRA1.120e-3649.67ERCC4 domain-containing protein n=1 Tax=Nannochlor... [more]
A0A1Z5JRX1_FISSO2.780e-3643.48DNA excision repair protein ERCC-4 n=2 Tax=Fistuli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.20coord: 93..157
e-value: 1.5E-18
score: 68.4
NoneNo IPR availableGENE3D3.40.50.10130coord: 1..80
e-value: 4.6E-15
score: 57.5
NoneNo IPR availablePANTHERPTHR10150DNA REPAIR ENDONUCLEASE XPFcoord: 1..156
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 1..71
IPR010994RuvA domain 2-likeSUPERFAMILY47781RuvA domain 2-likecoord: 99..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9188contigP-canaliculata_contig9188:4321..9013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9188.23167.1mRNA_P-canaliculata_contig9188.23167.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9188 3395..11882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9188.23167.1 ID=prot_P-canaliculata_contig9188.23167.1|Name=mRNA_P-canaliculata_contig9188.23167.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=159bp
MLKHYKVPVLLIEFNPEKAFCLLGAGDLTPDIKLNSITSQLTLLTIHFPQ
LRILWSKSEHATADMFKELMKNNASVDVEKAHAAGGGGADGVGEEARATA
KELLMRLPGINVHNYRNVLREVDTIADLSKLSEEELRPLLGTANASKLYK
FFRQPAPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011335Restrct_endonuc-II-like
IPR010994RuvA_2-like