prot_P-canaliculata_contig9181.23160.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9181.23160.1
Unique Nameprot_P-canaliculata_contig9181.23160.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length144
Homology
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BLAST of mRNA_P-canaliculata_contig9181.23160.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 8.710e-5
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:   44 SKGVRASEFQKYLENPMIDPEVRPDEVELGTTVEHMKLLRNLLEK 88
            S G+ A + Q YLE+P+ DPEVRPDE    TTVE++K LRN LEK
Sbjct: 1203 SGGLVAGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEK 1247
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9181.23160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLB1_ECTSI8.710e-560.00Ankyrin Repeat Transient Receptor Potential Channe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9181contigP-canaliculata_contig9181:11259..11690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9181.23160.1mRNA_P-canaliculata_contig9181.23160.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9181 11169..12444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9181.23160.1 ID=prot_P-canaliculata_contig9181.23160.1|Name=mRNA_P-canaliculata_contig9181.23160.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=144bp
MINHRGELRPSHPPSQDGVEATDDRFQVSSHDNADAQVHSILKSKGVRAS
EFQKYLENPMIDPEVRPDEVELGTTVEHMKLLRNLLEKRFTNLGEGLEKK
FIDRIDCLEKKVGEHVDCLENKFNSFKTDLLETLRGDQRLMGN*
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