prot_P-canaliculata_contig9181.23158.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9181.23158.1
Unique Nameprot_P-canaliculata_contig9181.23158.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length133
Homology
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BLAST of mRNA_P-canaliculata_contig9181.23158.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 9.190e-24
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 0 
Query:    2 LLSLQKKVDKFVLKVFEGLPQTVRGFENGMSQCSALFEPEGPRNNPCRRSGPLRVAFERREQTKILCAAALLMDYLYRKFMDGLPDMRDSGRVLQDRYELIRLGQGENGD 111
            LLSLQ++VD  +L++ E LPQTV+GF+ GM+ CSA+FEPE  R +     GPLR+A + R+  +  C   LL D+L R+F  GLP +RD+  +L DR EL  L +G  G+
Sbjct:  601 LLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSAVFEPELSREDARGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGE 710
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9181.23158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLB1_ECTSI9.190e-2447.27Ankyrin Repeat Transient Receptor Potential Channe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9181contigP-canaliculata_contig9181:6890..7288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9181.23158.1mRNA_P-canaliculata_contig9181.23158.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9181 6890..7288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9181.23158.1 ID=prot_P-canaliculata_contig9181.23158.1|Name=mRNA_P-canaliculata_contig9181.23158.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=133bp
MLLSLQKKVDKFVLKVFEGLPQTVRGFENGMSQCSALFEPEGPRNNPCRR
SGPLRVAFERREQTKILCAAALLMDYLYRKFMDGLPDMRDSGRVLQDRYE
LIRLGQGENGDGFVLGVKPGDPLFNMDHDPSVR
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