prot_P-canaliculata_contig9152.23119.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9152.23119.1
Unique Nameprot_P-canaliculata_contig9152.23119.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length87
Homology
BLAST of mRNA_P-canaliculata_contig9152.23119.1 vs. uniprot
Match: A0A6H5L287_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L287_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 6.990e-22
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    7 HKAHKADDQVVLGIGAVFGYVDFQLEQPRGHCARALEDCTLAVFTRPLLDRMLDENPRLLCVLERSIMLHLAQQLSDLPV 86
            + A +A  QV+  +GA+FGYVD+QLE+ R H A A+ D  + VF R  LDRM++ENPRLLC+LERS+M HLA +LS+LPV
Sbjct:  489 NSAARAGGQVLFNVGAIFGYVDYQLEERRAHSAIAVTDAVVTVFPRAHLDRMMEENPRLLCLLERSVMKHLALELSNLPV 568          
BLAST of mRNA_P-canaliculata_contig9152.23119.1 vs. uniprot
Match: D8LNQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ9_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.920e-21
Identity = 45/76 (59.21%), Postives = 59/76 (77.63%), Query Frame = 0
Query:   11 KADDQVVLGIGAVFGYVDFQLEQPRGHCARALEDCTLAVFTRPLLDRMLDENPRLLCVLERSIMLHLAQQLSDLPV 86
            +A  QV+  +GA+FGYVD+QLE+ R H A A+ D  + VF R  LDRM++ENPRLLC+LERS+M HLA +LS+LPV
Sbjct:  824 RAGGQVLFNVGAIFGYVDYQLEERRAHSAIAVTDAVVTVFPRAHLDRMMEENPRLLCLLERSVMKHLALELSNLPV 899          
BLAST of mRNA_P-canaliculata_contig9152.23119.1 vs. uniprot
Match: A0A835ZH57_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH57_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.940e-9
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0
Query:   14 DQVVLGIGAVFGYVDFQLEQPRGHCARALED-CTLAVFTRPLLDRMLDENPRLLCVLERSIMLHLAQQLSD 83
            ++V+LG GA+FGYVDFQLEQ R   A       T+  FTR  +D M + +PRL  +LERS++   A +L++
Sbjct: 1128 EEVLLGPGAIFGYVDFQLEQERTFTAYVASPMATICSFTRESVDEMAERHPRLCILLERSVLKQSAMELAN 1198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9152.23119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L287_9PHAE6.990e-2257.50Cyclic nucleotide-binding domain-containing protei... [more]
D8LNQ9_ECTSI1.920e-2159.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZH57_9STRA2.940e-945.07Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 2..85
e-value: 1.0E-8
score: 36.9
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 17..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9152contigP-canaliculata_contig9152:8573..10806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9152.23119.1mRNA_P-canaliculata_contig9152.23119.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9152 8214..12142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9152.23119.1 ID=prot_P-canaliculata_contig9152.23119.1|Name=mRNA_P-canaliculata_contig9152.23119.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=87bp
METADGHKAHKADDQVVLGIGAVFGYVDFQLEQPRGHCARALEDCTLAVF
TRPLLDRMLDENPRLLCVLERSIMLHLAQQLSDLPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR018490cNMP-bd-like