prot_P-canaliculata_contig91447.23110.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig91447.23110.1
Unique Nameprot_P-canaliculata_contig91447.23110.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length338
Homology
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 6.450e-128
Identity = 212/338 (62.72%), Postives = 250/338 (73.96%), Query Frame = 0
Query:    1 INPLLSETDWEVLRLIDPLLEPFMSAQKKLEGATYVTGSLVIPEVAMMRAGLKGTIEDLRDVSPPGLAVATRAAMEIVRPDAEALWSDFTTRWGDGSSILEYKEGRRRQPQGFKLQQVFATALDPRAKHLYGIHPQEQPSVWRAVASEAVESALRKQASDKTVLPVRSPSGEPAVETLPVT-GAGSRDPKRSRLNPFEAAAAAHAAGAGAGSIADESTDEVWERLSTIVDMEVSAFKTAPGLSVSKEVEGAT----VYNDPLDWWRKKEREYPLLAALARRVLAIPASQAQSERMFSTAGLVVTPTRNRLLAENVELLVYLRNVWNVVDEWRKSASKK 333
            ++PLLS+TDWEVLRLI+P+L PFM AQK LEGA YVTGS+ I ++A +R GL+  I DL+ V+  GL   T+ AME VRPDAEAL +DFT RWGDGS+ILEY+EG+RRQPQGFK +QV+ATALDPRAKHLYGI  +E   VWRAVAS AV+ AL K A DK       P+ +P V+T P   G G    KR R++ FEAAAA              S DE  E+L  IVDMEVSAFK APG+ V    +  T    V+N+PLD WRKK+ EYPLLAALARRVLAIP+SQAQSER+FSTAGL VTPTR+RLL ENVELLVYLRNVW VVDEW+KSA++K
Sbjct:  225 VHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDP-VQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXX-XXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKSATRK 560          
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 3.460e-109
Identity = 177/291 (60.82%), Postives = 219/291 (75.26%), Query Frame = 0
Query:    1 INPLLSETDWEVLRLIDPLLEPFMSAQKKLEGATYVTGSLVIPEVAMMRAGLKGTIEDLRDVSPPGLAVATRAAMEIVRPDAEALWSDFTTRWGDGSSILEYKEGRRRQPQGFKLQQVFATALDPRAKHLYGIHPQEQPSVWRAVASEAVESALRKQASDKTVLPVRSPSGEPAVETLPVTGAGSRDPKRSRLNPFEAAAAAHAAGAGAGSIADESTDEVWERLSTIVDMEVSAFKTAPGLSVSK-EVEGATVYNDPLDWWRKKEREYPLLAALARRVLAIPASQAQSERM 290
            I P+LSETDWEVLRLI+P+L PFM AQK LEGA YVTGS+ +P++  +R GL+  I DLR     G++ +TR AME V PDAEALW DF  RWGDGSSILEY+EG+RRQPQGFKLQQV ATA+DPRAKHLYGI   E  SVWRAVA++AV+ A  K +SD T     +P+ +P V T PV   G   PKR+RL+ FEAAAAAHA GA A S   ++ DE  E+L+++VD+EV++F+T PG+S+     +G  VYNDPLDWWR ++ E+P LAALARRVLAIP+SQA SER+
Sbjct:  261 IAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQP-VGTPPVAPGGQGAPKRARLSAFEAAAAAHA-GAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 3.960e-63
Identity = 143/355 (40.28%), Postives = 192/355 (54.08%), Query Frame = 0
Query:    3 PLLSETDWEVLRLIDPLLEPFMSAQKKLEGATYVTGSLVIPEVAMMRAGLKGTIEDLRDVSPPGLAVATRAAMEIVRPDAEALWSDFTTRWGDGSSILEYKEGRRRQPQGFKLQQVFATALDPRAKHLYGIHPQEQPSVWRAVASEAVESALRKQASDKTVLPVR---------------------------------------SPSGEPAVETLPVTGAGSRDPKRSRLNPFEAAAAAHAAGAGAGSIADESTDEVWERLSTIVDMEVSAFKTAPGLSVSKEVEGATVYNDPLDWWRKKEREYPLLAALARRVLAIPASQAQSERMFSTAGLVVTPTRNRLLAENVELLVYLRN 318
            PLL E DWEVL+L++ LL+PFM+AQK LE +  VT  LV P +A ++ GL   +E L+  S P  ++   A  +++   A+AL +D + RWGD + +L Y EG RRQP+GFK +QV ATAL PR+K LYGI   E   VW A A+EAV+ A+  +A++                                              + S   +   +PV  A                  AH         A+ S+  +  ++ +I+  EV AFK  PGL+VS E +G  V   PL+WWR K REYP LA+LARRVL IPA QAQSER+FS+AGLVVT TR R+  ENV L+V+LRN
Sbjct:  192 PLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILC-AQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHG---DKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRN 542          
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 4.470e-51
Identity = 113/256 (44.14%), Postives = 144/256 (56.25%), Query Frame = 0
Query:   88 DFTTRWGDGSSILEYKEGRRRQPQGFKLQQVFATALDPRAKHLYGIHPQEQPSVWRAVASEAVESALRKQASDKTVLPVRSPSGEPAVETLPVTGAGSRDPKRSRLNPFEAAAA----AHAAGAGAGSIADESTDEVWERLSTI-VDMEVSAFKTAPGLSVSKE-VEGATVYNDPLDWWRKKEREYPLLAALARRVLAIPASQAQSERMFSTAGLVVTPTRNRLLAENVELLVYLRNVWNVVDEWRKSASKKSASK 337
            DF  RWGDG +IL YKEGRRRQP GFK  QV ATALDPR K LYG+   E+  VW+ V  EAV+ A+  + S+ +     S  G                                  A A G       DE  D  + RL T  V +E++AFK + G+ + +E  EGA VY DPLDWWR +  ++P LA LARRVLAIPA+QA+SER+FS AG +VT  RN L    VELLV LR+ W +V+EW +S +  +A +
Sbjct:   50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQR-ASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQSNTPAAAKR 304          
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.820e-41
Identity = 94/205 (45.85%), Postives = 125/205 (60.98%), Query Frame = 0
Query:    1 INPLLSETDWEVLRLIDPLLEPFMSAQKKLEGATYVTGSLVIPEVAMMRAGLKGTIEDLRDVSPPGLAVATRAAMEIVRPDAEALWSDFTTRWGDGSSILEYKEGRRRQPQGFKLQQVFATALDPRAKHLYGIHPQEQPSVWRAVASEAVESALRKQASDKTVLPVRSPSGEPAVETLPVTGAGSRDPKRSRLNPFEAAAAAHAA 205
            I PLL+E DWEVL+L++PLL PFM+AQK LE +  VT SLV   +A +R  L   IE L+  S P  ++   A  +I+R  A AL +D + RW DG+ +L Y EG RRQP+GFK +QV ATALDPR+K LYGI   E   VW AVA+EAV+ A+  +A++ T       S   +   +PV  A +   +  R   F  A+AAH A
Sbjct:  162 IPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRC-APALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQ------SAGASSSPIPVEPAAAAAYQPRRRRGFATASAAHGA 359          
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 9.460e-17
Identity = 47/100 (47.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:   64 PPGLAVATRAAMEIVRPDAEALWSDFTTRWGDGSSILEYKEGRRRQPQGFKLQQVFATALDPRAKHLYGIHPQEQPSVWRAVASE-AVESALRKQASDKT 162
            PP        A   V P  +AL  DF  RWGDG +IL YKEG RRQP GFK  QV ATALDPR K L+G+   E+  VW+ V  E AV+ A+  + ++ +
Sbjct:  148 PPDSDANVNTARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVETRNAENS 247          
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: A0A7S3PUA6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUA6_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.930e-15
Identity = 64/221 (28.96%), Postives = 105/221 (47.51%), Query Frame = 0
Query:  123 LDPRAKHLYGI-HPQEQPSVWRAVASEAVESALRKQASDKTVLPV----RSPSGEPAVETLP-VTGAGSRDPKRSRLNPFEAAAAAHAAGAG--AGSIADESTDEVW--------ERLSTIVDMEVSAFKTAPGLSVSKEVEGATV-YNDPLDWWRKKEREYPLLAALARRVLAIPASQAQSERMFSTAGLVVTPTRNRLLAENVELLVYLRNVWNVVDEW 326
            LDPR K   GI H +++  +W A+  + ++ A++     K +       +   G  AV T   V+     D   ++          HA      A  + D S+            E + +IV  E+  FK   G+ +      A   +N PL WW++  REYP +  LA+R+L++PA+ A SER+FS A L+ T  R  L  +NV +LV+L+  ++++ EW
Sbjct:   11 LDPRMKRNKGIFHRKDERLIWSAIEDDVLDIAIKSSEKVKEIESSNDKEKDTDGTSAVSTRKRVSEDNVNDQHINKKRSSGGGTRNHAKDNALFASFLNDSSSXXXXXXXXXVAEESIESIVTKELDMFKKEKGVHLFVNGSNADKGFNSPLQWWKQNHREYPNIWMLAKRILSVPATSAPSERVFSVASLIATKKRGSLKPDNVNMLVFLKENFDLI-EW 230          
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: A0A2S2P4C5_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2P4C5_SCHGA)

HSP 1 Score: 79.0 bits (193), Expect = 1.130e-14
Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 0
Query:  255 DPLDWWRKKEREYPLLAALARRVLAIPASQAQSERMFSTAGLVVTPTRNRLLAENVELLVYL 316
            DP +WW+  E++YPL+A +A++ L+IPA+   SER FSTAG VVTP RN L  ENV +LV+L
Sbjct:   36 DPFEWWKSHEKKYPLVAKVAKKFLSIPATSVSSERCFSTAGNVVTPKRNCLAPENVNMLVFL 97          
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: UPI001955E492 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Osteoglossocephalai TaxID=1489341 RepID=UPI001955E492)

HSP 1 Score: 83.6 bits (205), Expect = 4.590e-14
Identity = 72/258 (27.91%), Postives = 125/258 (48.45%), Query Frame = 0
Query:   67 LAVATRAAMEIVRPDAEALWSDFTTRWGDGSSILEYK-------EGRRRQPQGFKLQQVFATALDPRAKHLYGIHPQEQPSVWRAVASEAVESALRKQASDKTVLPVRSPSGEPAVETLPVTGAGSRDPKRSRLNPFEAAAAAHAAGAGAGSIADESTDEVWERLSTIVDMEVSAFKTAPGLSVSKEVEGATVYNDPLDWWRKKEREYPLLAALARRVLAIPASQAQSERMFSTAGLVVTPTRNRLLAENVELLVYLR 317
            ++  T  ++ ++ P  + +    T+   D ++I E K       +GR   P G +     ATALDPR K L  +       ++  + ++ ++   + Q+S+          G+ A      + +   +P  S  +P +  +A     A      +  T    + LS I+  EV+++K    +SV +         DPL WW+  E +YP +A LA+R LA+  +   SER+FSTAG +VT +R+RLLAENV+ L++L+
Sbjct:  276 MSTETSPSVSMIIPLQKMILKSMTSSAEDSTTIKEAKAAITKDLKGRYNDP-GVQDYLHRATALDPRFKSLPYLEEACIQKIYDDLTTDILDIEKQGQSSE----------GQTA------SSSSGAEPGPSETSPPQKKSAMAMVFADLFKTEERRT----KPLSDIIHEEVTSYKATGCISVDE---------DPLAWWKSNEHKYPHIAKLAQRNLAVQGTSVPSERVFSTAGDIVTASRSRLLAENVDKLIFLQ 503          
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.880e-14
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0
Query:  262 KKEREYPLLAALARRVLAIPASQAQSERMFSTAGLVVTPTRNRLLAENVELLVYLRNVWNVVDEWRKSASKKSA 335
            K   ++P LA LARRVLAIPA+QA+SER+FS AG +VT  RN L    VELLV LR+ W +V+EW +S +  +A
Sbjct:  149 KVSTDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQSNTPAAA 222          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig91447.23110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI6.450e-12862.72Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE3.460e-10960.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE3.960e-6340.28Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JWI1_9PHAE4.470e-5144.14Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE1.820e-4145.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVE5_9PHAE9.460e-1747.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3PUA6_9STRA7.930e-1528.96Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2S2P4C5_SCHGA1.130e-1456.45Zinc finger BED domain-containing protein 1 (Fragm... [more]
UPI001955E4924.590e-1427.91E3 SUMO-protein ligase ZBED1-like n=2 Tax=Osteoglo... [more]
A0A6H5JPB0_9PHAE4.880e-1455.41Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 255..317
e-value: 2.5E-19
score: 68.8
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 4..310
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig91447contigP-canaliculata_contig91447:194..1207 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig91447.23110.1mRNA_P-canaliculata_contig91447.23110.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig91447 194..1207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig91447.23110.1 ID=prot_P-canaliculata_contig91447.23110.1|Name=mRNA_P-canaliculata_contig91447.23110.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=338bp
INPLLSETDWEVLRLIDPLLEPFMSAQKKLEGATYVTGSLVIPEVAMMRA
GLKGTIEDLRDVSPPGLAVATRAAMEIVRPDAEALWSDFTTRWGDGSSIL
EYKEGRRRQPQGFKLQQVFATALDPRAKHLYGIHPQEQPSVWRAVASEAV
ESALRKQASDKTVLPVRSPSGEPAVETLPVTGAGSRDPKRSRLNPFEAAA
AAHAAGAGAGSIADESTDEVWERLSTIVDMEVSAFKTAPGLSVSKEVEGA
TVYNDPLDWWRKKEREYPLLAALARRVLAIPASQAQSERMFSTAGLVVTP
TRNRLLAENVELLVYLRNVWNVVDEWRKSASKKSASK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf