prot_P-canaliculata_contig91424.23108.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig91424.23108.1
Unique Nameprot_P-canaliculata_contig91424.23108.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length153
Homology
BLAST of mRNA_P-canaliculata_contig91424.23108.1 vs. uniprot
Match: A0A518EX18_9BACT (Nickel uptake substrate-specific transmembrane region n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EX18_9BACT)

HSP 1 Score: 112 bits (280), Expect = 7.120e-26
Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 0
Query:    1 GKVAGTVKGTDVQPLADATLFFRDPSGAFVDRVSGDRSDASGAFEASGLAPGTYTVSVRMPGYASSDSAVCTVASGETSQVELRVDVGIMLKISVVDGEGEPIRGRVEVFDRDDREVGAPRTVAQVRSQFNSGVSTFVTEVGPLPPGRYEV 151
            G++ G V+    +P A+A++F RD +G  ++  S   ++ASGAFE  GLAPG YT++ R  G AS+      + SGE ++  + VD G ML +S+ D  G  IR RV V D  D EV    ++ ++ ++ + GV      VGPLPPG YEV
Sbjct:  982 GELHGVVRDAAGKPAAEASIFLRDENGRLLELFSFQATNASGAFEYDGLAPGEYTLTARAEGMASTTDTPLRIRSGEVTETSITVDTGTMLLVSLQDKTGADIRSRVSVRDEHDHEVNGMLSLNELMARISGGVDGKEQRVGPLPPGTYEV 1132          
BLAST of mRNA_P-canaliculata_contig91424.23108.1 vs. uniprot
Match: A0A7Y5USU0_9PLAN (Carboxypeptidase regulatory-like domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5USU0_9PLAN)

HSP 1 Score: 105 bits (261), Expect = 2.540e-23
Identity = 57/149 (38.26%), Postives = 80/149 (53.69%), Query Frame = 0
Query:    3 VAGTVKGTDVQPLADATLFFRDPSGAFVDRVSGDRSDASGAFEASGLAPGTYTVSVRMPGYASSDSAVCTVASGETSQVELRVDVGIMLKISVVDGEGEPIRGRVEVFDRDDREVGAPRTVAQVRSQFNSGVSTFVTEVGPLPPGRYEV 151
            + GTV+G D +P   A++F RD  G  ++ +S   +DA G F   G APG YT+  R    +S DSA     +G+ + VEL ++ G MLK+SV D EG+ +R  V V D   RE     +       F  G S+    +GPLPPG+Y V
Sbjct:  919 IEGTVRGNDGKPAGGASIFVRDAQGRTINPMSSCTTDADGKFRFDGAAPGNYTLIARREELSSRDSAPVAARAGQPATVELVLETGTMLKVSVEDKEGKTVRASVSVVDSAGREYANLMSTEAFGQMFADGFSSTERRIGPLPPGKYRV 1067          
BLAST of mRNA_P-canaliculata_contig91424.23108.1 vs. uniprot
Match: A0A523PBJ1_9BACT (Carboxypeptidase regulatory-like domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PBJ1_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 2.500e-16
Identity = 54/152 (35.53%), Postives = 74/152 (48.68%), Query Frame = 0
Query:    1 GKVAGTVKGTDVQPLADATLFFRDPSGAFVDRVSGDRSDASGAFEASGLAPGTYTVSVRMPGYASSDSAVCTVASGETSQVELRVDVGIMLKISVVDGEGEPIRGRVEVFDRDDREVGAPRTVAQVRSQFNSGVSTFVTEVGPLPPGRYEVR 152
            GK+ G V+    +P+A   +F                    G FE  G+APG  TVS R  G A+ DSA   V +G  + +EL V+ G +L ++VVD  GEP+R  + V D   R V      A V   F  G+S+   +VGPL  G+Y VR
Sbjct: 1015 GKLEGLVRDGAGEPVAGVAIFVXXXXXXXXXXXXXXXXXXXGRFEYEGVAPGLVTVSARGDGVAAGDSAPVEVRAGAATSIELTVEPGTLLVVTVVDKAGEPVRASLVVTDAAGRAVEGMYGEAAVEKLFAEGISSREHKVGPLAAGKYVVR 1166          
BLAST of mRNA_P-canaliculata_contig91424.23108.1 vs. uniprot
Match: A0A518BPT5_9BACT (Nickel uptake substrate-specific transmembrane region n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BPT5_9BACT)

HSP 1 Score: 71.6 bits (174), Expect = 1.240e-11
Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 0
Query:    3 VAGTVKGTDVQPLADATLFFRDPSGAFVDRVSGDRSDASGAFEASGLAPGTYTVSVRMPGYASSDSAVCTVASGETSQVELRVDVGIMLKISVVDGEGEP-IRGRVEVFDRDDREV----GAPRTVAQVRSQFNSGVSTFVTEVGPLPPGRYEV 151
            V GTV+ T+ +P+A AT+F RD +           +DASG F   GLAPG Y+ S R    AS ++    V +     V +  +VG  L I+ ++ + EP I   V VFD  + +V    G P  +A + + F SG       +GPL PG+Y V
Sbjct:  978 VTGTVRSTNGEPVAAATIFVRDAAXXXXXXXXXILTDASGRFRFEGLAPGEYSFSARNREMASIETDPVEVNAENPPVVNMVAEVGTTL-IARIELDDEPSIDASVRVFDEREHDVSGMVGYPDLMAAITAGFESGEF----RIGPLAPGKYRV 1126          
BLAST of mRNA_P-canaliculata_contig91424.23108.1 vs. uniprot
Match: A0A7V7STW0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V7STW0_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 5.840e-9
Identity = 43/146 (29.45%), Postives = 73/146 (50.00%), Query Frame = 0
Query:    7 VKGTDVQPLADATLFFRDPSGAFVDRVSGDRSDASGAFEASGLAPGTYTVSVRMPGYASSDSAVCTVASGETSQVELRVDVGIMLKISVVDGEGEPIRG-RVEVFDRDDREVGAPRTVAQVRSQFNSGVSTFVTEVGPLPPGRYEV 151
            V GTD  P++ A +F+ D  G  + + +   +D+SG      L  G   +  R P     +  V  + SGE ++VEL ++ G +L++ VVDG GEP++G +V   D+ +  V    T  +  ++    +      +GPL PG Y +
Sbjct:  839 VLGTDGLPVSGAGVFYLDSEGQPLSQFTMQGTDSSGRVRLHSLPSGLGRLLARHPEMGQVEKEV-RLESGEENKVELHLETGTVLRVLVVDGRGEPLKGVQVIALDQRNAPVSTLFTSVEAMAKLYEFMEGGEQRLGPLAPGDYSL 983          
BLAST of mRNA_P-canaliculata_contig91424.23108.1 vs. uniprot
Match: UPI001F0A2D5A (carboxypeptidase-like regulatory domain-containing protein n=1 Tax=Actinomadura atramentaria TaxID=1990 RepID=UPI001F0A2D5A)

HSP 1 Score: 53.9 bits (128), Expect = 1.340e-5
Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = 0
Query:    1 GKVAGTVKGTDVQPLADATLFFRDPSGAFVDRVSGDRSDASGAFEASGLAPGTYTVSVRMPGYASSDSAVCTVASGETSQVELRVDVGIMLKISVVDGEGEPIR 104
            G +AGTV+GT  +P+ADA +   D  G  V      RS A GA+  + LA G YT++V   G+      V    SG T + ++ +  G+ L+ +V D  G P+R
Sbjct:  157 GGLAGTVRGTGGEPVADAAVVVTDVRGEVVGTA---RSGADGAYALTDLAAGAYTLAVSADGHRPVALPVEVAGSGRTRR-DVDLPAGLHLRGTVRDRSGAPLR 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig91424.23108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A518EX18_9BACT7.120e-2639.74Nickel uptake substrate-specific transmembrane reg... [more]
A0A7Y5USU0_9PLAN2.540e-2338.26Carboxypeptidase regulatory-like domain-containing... [more]
A0A523PBJ1_9BACT2.500e-1635.53Carboxypeptidase regulatory-like domain-containing... [more]
A0A518BPT5_9BACT1.240e-1135.06Nickel uptake substrate-specific transmembrane reg... [more]
A0A7V7STW0_9BACT5.840e-929.45Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
UPI001F0A2D5A1.340e-535.58carboxypeptidase-like regulatory domain-containing... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1120coord: 2..86
e-value: 4.1E-11
score: 45.0
NoneNo IPR availablePFAMPF13620CarboxypepD_regcoord: 3..84
e-value: 2.3E-14
score: 53.4
IPR008969Carboxypeptidase-like, regulatory domain superfamilySUPERFAMILY49464Carboxypeptidase regulatory domain-likecoord: 3..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig91424contigP-canaliculata_contig91424:744..1202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig91424.23108.1mRNA_P-canaliculata_contig91424.23108.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig91424 744..1202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig91424.23108.1 ID=prot_P-canaliculata_contig91424.23108.1|Name=mRNA_P-canaliculata_contig91424.23108.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=153bp
GKVAGTVKGTDVQPLADATLFFRDPSGAFVDRVSGDRSDASGAFEASGLA
PGTYTVSVRMPGYASSDSAVCTVASGETSQVELRVDVGIMLKISVVDGEG
EPIRGRVEVFDRDDREVGAPRTVAQVRSQFNSGVSTFVTEVGPLPPGRYE
VRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008969CarboxyPept-like_regulatory