prot_P-canaliculata_contig9092.23047.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9092.23047.1
Unique Nameprot_P-canaliculata_contig9092.23047.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length396
Homology
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: D7FIA6_ECTSI (Similar to cyclin T2 isoform b isoform 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA6_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 9.470e-53
Identity = 108/262 (41.22%), Postives = 160/262 (61.07%), Query Frame = 0
Query:    4 DEKTLKRNVHTFLFECGKRLKMKTLVMAASATICQRYYAQRSFEDIPRYHVGSAALLLASKAEEFPASMEDILMVAYDVWNNTDRYPEKRKKYFKSQMFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAKEQFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETEENWALALEFGGEQRLKRACCQLLDCLDEDEGQTGIKLTRTMVLEALVITGFVRSLD-PNSKPRAP 264
            +EK  +R  HTF+++C + L+ K LV+AA+ TI QRY++Q SF  I R    +AA+ LASK EEF   ++D++MV + V     R+  +R+    S  +     +L  AE  L+ ++ FDF IEH + +  ++V    + GW+ A +     KG+  LL +SLRGT+CLEYPP++RARLV +++LL N I  P      WA  +EF   +RL RA CQLL+ LD+D G+TG K+T+  V  ALV  G +++ + PN  PR P
Sbjct:   63 EEKEYRRKAHTFIYDCCQVLRAKALVIAAAMTISQRYFSQVSFRKIDRSDTAAAAIFLASKVEEFRVHIKDVMMVTHRV-----RHKNERRLVENSDEYNRYKDRLLKAENQLVNALGFDFMIEHPFGHSNDLVAYLCEEGWVPADKSALISKGSHHLLIKSLRGTLCLEYPPTFRARLVTYLSLLVNNISPPPG---GWAEMIEFEDHRRLNRAACQLLETLDDDSGKTGKKITKKRVAAALVEAGHIKNKNAPNRVPRQP 316          
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: D7FVH4_ECTSI (Si:dkey-18f23.10 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH4_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 3.870e-38
Identity = 93/247 (37.65%), Postives = 141/247 (57.09%), Query Frame = 0
Query:    5 EKTLKRNVHTFLFECGKRLKMKTLVMAASATICQRYYAQRSFEDIPRYHVGSAALLLASKAEEFPASMEDILMVA-----YDVWNNTDRYPEKRKKYFKSQMFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAKEQFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETEENWALALEFGGEQRLKRACCQLLDCLDEDEGQTGIKLTRTMVLEAL 246
            +K  +   H  + E  KRLK K +V+A + TI QR+ A  SF DI  +   +A++LLASK E+F   ++D+L+V      Y +   +D  P +  K FK        T++   E  +M ++ FDF IEHAYP+  +++    + GW++        KG   LL+QSL+ TMCLEYPP++RARL  +++LL N +P P   E  W   L+F    +L+RA  + L+ LD D G++G K+TR  V +AL
Sbjct:   73 DKEHRAQAHKLMLEICKRLKTKAVVIAGAMTIYQRFLALVSFTDINLHDTVAASVLLASKVEDFKIHIKDVLIVTNKVANYAIIGRSD--PSEAYKRFK--------TRVVKVENKIMSALGFDFLIEHAYPHANDLILHFQRMGWVRENMGALISKGCCHLLSQSLKWTMCLEYPPTFRARLATYLSLLVNNVPPPQSGE--WTEVLQFKDPGQLERATEEWLETLDNDTGKSGTKITRHRVTKAL 307          
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: A0A6H5JJ90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ90_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 3.970e-25
Identity = 66/164 (40.24%), Postives = 96/164 (58.54%), Query Frame = 0
Query:  126 IEHAYPYVYEVVETCGKNGWLKAKEQFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETEENWALALEFGGEQRLKRACCQLLDCLDEDEGQTGIKLTRTMVLEALVITGFVRSLD-PNSKPRAPRSFDVRKEAGRQRASASGKTLGKS 288
            IEH + +  ++V    + GW+ A +     KG+  LL +SLRGT+CLEYPP++RARLV +++LL N I  P      WA  +EF   ++L RA CQLL+ LD+D G+TG K+T+  V  ALV  G +++ + PN  PR P        A R R +A   ++  S
Sbjct:    2 IEHPFGHSNDLVAYLCEEGWVPADKSALISKGSHHLLIKSLRGTLCLEYPPTFRARLVTYLSLLVNNISPPPG---GWAEMIEFEDHRQLNRAACQLLETLDDDSGKTGKKITKKRVAAALVEAGHIKNKNAPNRVPRQPSGLTY---ADRDRMAARSSSIQSS 159          
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: C1FEH1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FEH1_MICCC)

HSP 1 Score: 98.6 bits (244), Expect = 5.000e-20
Identity = 72/231 (31.17%), Postives = 118/231 (51.08%), Query Frame = 0
Query:    5 EKTLKRNVHTFLFECGKRLKMKTLVMAASATICQRYYAQRS--FEDIPRYHVGSAALLLASKAEEFPASMEDILMVAYDVWNNTDRYPEKRKKYFKSQMFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAKEQFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETEENWALALEFGGEQRLKRACC-----QLLDCLDE 228
            E T + +   FL + G  LKM  L +A +  +C R+YA+ S   ++  R+ V +A L LA+K EE P  +++++ VAY V +  + Y +  K+  + + FEE+  K+  AER ++ ++ FDFN+EH Y ++  +    G+           A + A +  N SLR T+CL++     AR    V L  N + A   T+ N    L+   E+  K A C     Q++D  DE
Sbjct:   24 EATFRWSYCEFLKDVGIELKMPQLTIATAVVLCHRFYAKHSHGIKENDRFIVATACLFLAAKVEETPKPLKEVVRVAYLVQHKNE-YDDAVKRIHQKERFEEHREKVLQAERLILHTVGFDFNVEHPYKHILNIARELGQREEQLEIHHRRATQVAWNFANDSLRTTLCLQFCSHDIARAA--VNLSFNILQA---TQRNPQKLLD---ERASKDAICEEICNQIMDLYDE 245          
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: B7FL84_MEDTR (Uncharacterized protein n=3 Tax=50 kb inversion clade TaxID=2231393 RepID=B7FL84_MEDTR)

HSP 1 Score: 96.7 bits (239), Expect = 3.170e-19
Identity = 56/200 (28.00%), Postives = 107/200 (53.50%), Query Frame = 0
Query:    5 EKTLKRNVHTFLFECGKRLKMKTLVMAASATICQRYYAQRSFEDIPRYHVGSAALLLASKAEEFPASMEDILMVAYDVWNNTDRYPEKRKKYFKSQMFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAK-EQFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETEENW 203
            E  L+++  TFL + G RLK+  + +A +   C R++ ++S     R  + +  + LA K EE P  ++D++MV+Y++ N  D    +R K  + +++E+    +  AER ++ ++ FDFN+ H Y  + E ++        K K  Q A  + A + +N  LR ++CL++ P + A   +F+A     +  P++ E+ W
Sbjct:   56 ETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAVQRIK--QKEVYEQQKELILLAERVVLATLGFDFNVHHPYKPLVEAIK--------KFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVW 245          
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: A0A7J6EC76_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6EC76_CANSA)

HSP 1 Score: 98.6 bits (244), Expect = 5.580e-19
Identity = 61/236 (25.85%), Postives = 123/236 (52.12%), Query Frame = 0
Query:    1 SRHDEKTLKRNVH------TFLFECGKRLKMKTLVMAASATICQRYYAQRSFEDIPRYHVGSAALLLASKAEEFPASMEDILMVAYDVWNNTDRYPEKRKKYFKSQMFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAK-EQFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETEENWALALEFGGEQRLKRACCQLLDCLDED 229
            SRHD   LK+  +      TFL + G RLK+  + +A +   C R++ ++S     R  + +A + LA K EE P  ++++++++Y++ N  D  P   ++  + +++E+    +  AER ++ ++ FDFN++H Y  + E ++        K K  Q A  + A + +N  LR ++CL++ P + A   +F+A     +  P++ E+ W    +    Q L+    Q+L+  +++
Sbjct:   57 SRHDGVDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFHRQSHAKNDRRTIATACMFLAGKVEETPRLLKEVILISYEIINKKD--PAAAQRIKQKEVYEQQKELVLLAERIVLATLGFDFNVQHPYKPLVEAIK--------KFKVAQHALAQVAWNFVNDGLRTSLCLQFKPHHVAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQ-LEEVSNQMLELYEQN 281          
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: A0A803Q2T9_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q2T9_CANSA)

HSP 1 Score: 98.6 bits (244), Expect = 1.050e-18
Identity = 61/236 (25.85%), Postives = 123/236 (52.12%), Query Frame = 0
Query:    1 SRHDEKTLKRNVH------TFLFECGKRLKMKTLVMAASATICQRYYAQRSFEDIPRYHVGSAALLLASKAEEFPASMEDILMVAYDVWNNTDRYPEKRKKYFKSQMFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAK-EQFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETEENWALALEFGGEQRLKRACCQLLDCLDED 229
            SRHD   LK+  +      TFL + G RLK+  + +A +   C R++ ++S     R  + +A + LA K EE P  ++++++++Y++ N  D  P   ++  + +++E+    +  AER ++ ++ FDFN++H Y  + E ++        K K  Q A  + A + +N  LR ++CL++ P + A   +F+A     +  P++ E+ W    +    Q L+    Q+L+  +++
Sbjct:   46 SRHDGVDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFHRQSHAKNDRRTIATACMFLAGKVEETPRLLKEVILISYEIINKKD--PAAAQRIKQKEVYEQQKELVLLAERIVLATLGFDFNVQHPYKPLVEAIK--------KFKVAQHALAQVAWNFVNDGLRTSLCLQFKPHHVAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQ-LEEVSNQMLELYEQN 270          
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: G7ITD0_MEDTR (Cyclin T1 n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7ITD0_MEDTR)

HSP 1 Score: 97.8 bits (242), Expect = 2.240e-18
Identity = 64/239 (26.78%), Postives = 122/239 (51.05%), Query Frame = 0
Query:    5 EKTLKRNVHTFLFECGKRLKMKTLVMAASATICQRYYAQRSFEDIPRYHVGSAALLLASKAEEFPASMEDILMVAYDVWNNTDRYPEKRKKYFKSQMFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAK-EQFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETEENWALALEFGGEQRLKRACCQLLDCLDED--------EGQTG 234
            E  L+++  TFL + G RLK+  + +A +   C R++ ++S     R  + +  + LA K EE P  ++D++MV+Y++ N  D    +R K  + +++E+    +  AER ++ ++ FDFN+ H Y  + E ++        K K  Q A  + A + +N  LR ++CL++ P + A   +F+A     +  P++ E+ W    +    Q L+    Q+L+  +++        EG TG
Sbjct:   56 ETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAVQRIK--QKEVYEQQKELILLAERVVLATLGFDFNVHHPYKPLVEAIK--------KFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQ-LEEVSNQMLELYEQNRMPPSNEAEGTTG 283          
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: A0A7S4MTZ4_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MTZ4_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 3.210e-18
Identity = 58/180 (32.22%), Postives = 94/180 (52.22%), Query Frame = 0
Query:    1 SRHDEKTLKRNVHTFLFECGKRLKMKTLVMAASATICQRYYAQRSFEDIPRYHVGSAALLLASKAEEFPASMEDILMVAYDVWNNTDRYPEKRKKYFKSQMFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAKEQFAAVKGAISLLNQSLRGTMCLEYPPSYRA 180
            +R  E   +R    FL ECG++L++  L +A +     R+YA+ S+E   R+ V +  L LASK EE P  ++D++M  Y   +N ++ PE   K F      E   K+   ER L+ ++ FD ++EHAY  +   V++      +K     A +  A + +N S R T+CL+Y P + A
Sbjct:   46 AREKENITRRLTCAFLQECGQKLRLPQLSIATAIVFFHRFYARMSYEHYDRFTVATTCLFLASKVEETPKKLKDVVMETYKTQHNQEKAPEPETKEF-----FELKEKILVCERILLQALGFDLSVEHAYRPLLAYVKS------IKGTRDLAQI--AWNFINDSFRTTICLQYAPRHLA 212          
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Match: UPI001C500C91 (cyclin-T1-3-like isoform X1 n=3 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C500C91)

HSP 1 Score: 96.7 bits (239), Expect = 3.420e-18
Identity = 68/244 (27.87%), Postives = 118/244 (48.36%), Query Frame = 0
Query:    4 DEKTLKRNVHTFLFECGKRLKMKTLVMAASATICQRYYAQRSFEDIPRYHVGSAALLLASKAEEFPASMEDILMVAYDVWNNTDRYPEKRKKYFKSQMFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAKEQFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETEENWALALEFGGEQRLKRACCQLLDCLDEDEGQTGIKLTRTMVLEALV 247
            +E  L++   +F+ E G +LK+  L +A +  +C R+Y  +S        + S  + LASK EE P  + DI++V+Y++    D    +R K  K +++E     +   ER L+ ++ FD NI+H Y  +   ++    +       +   VK A + +N  L  T+CL+Y P Y A   LF+A   + +   A+  + W L  +    QRL+    Q+L  L++   +T I   R   + A V
Sbjct:   58 EESHLRKLYCSFIQELGMKLKVPQLTIATAMLLCHRFYMHQSHAKNEWQTIASVCMFLASKVEETPRLLRDIVVVSYELIYRRDPLAAQRIK--KKEVYERQKELILIGERLLLATVAFDLNIQHPYKPLVAALKRLNIS-------RHDLVKVAWNFVNDWLWTTLCLQYKPHYIAAGSLFLAAKFHKVKLSADRGKAWWLEFDVTP-QRLEEVIQQMLGLLEQQNRRTLIPSVREKAINATV 291          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9092.23047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIA6_ECTSI9.470e-5341.22Similar to cyclin T2 isoform b isoform 9 n=1 Tax=E... [more]
D7FVH4_ECTSI3.870e-3837.65Si:dkey-18f23.10 protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JJ90_9PHAE3.970e-2540.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
C1FEH1_MICCC5.000e-2031.17Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
B7FL84_MEDTR3.170e-1928.00Uncharacterized protein n=3 Tax=50 kb inversion cl... [more]
A0A7J6EC76_CANSA5.580e-1925.85Uncharacterized protein n=1 Tax=Cannabis sativa Ta... [more]
A0A803Q2T9_CANSA1.050e-1825.85Uncharacterized protein n=3 Tax=Cannabis sativa Ta... [more]
G7ITD0_MEDTR2.240e-1826.78Cyclin T1 n=1 Tax=Medicago truncatula TaxID=3880 R... [more]
A0A7S4MTZ4_9EUKA3.210e-1832.22Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
UPI001C500C913.420e-1827.87cyclin-T1-3-like isoform X1 n=3 Tax=Macadamia inte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 14..111
e-value: 0.0057
score: 25.9
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 7..123
e-value: 5.1E-11
score: 42.4
NoneNo IPR availableGENE3D1.10.472.10coord: 126..241
e-value: 2.4E-9
score: 39.4
NoneNo IPR availableGENE3D1.10.472.10coord: 1..124
e-value: 2.3E-26
score: 94.3
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 3..371
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 127..227
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 5..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9092contigP-canaliculata_contig9092:4206..7725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9092.23047.1mRNA_P-canaliculata_contig9092.23047.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9092 4204..7725 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9092.23047.1 ID=prot_P-canaliculata_contig9092.23047.1|Name=mRNA_P-canaliculata_contig9092.23047.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=396bp
SRHDEKTLKRNVHTFLFECGKRLKMKTLVMAASATICQRYYAQRSFEDIP
RYHVGSAALLLASKAEEFPASMEDILMVAYDVWNNTDRYPEKRKKYFKSQ
MFEENATKLAHAERALMCSINFDFNIEHAYPYVYEVVETCGKNGWLKAKE
QFAAVKGAISLLNQSLRGTMCLEYPPSYRARLVLFVALLCNGIPAPAETE
ENWALALEFGGEQRLKRACCQLLDCLDEDEGQTGIKLTRTMVLEALVITG
FVRSLDPNSKPRAPRSFDVRKEAGRQRASASGKTLGKSQFADDAVTEWPC
PPPPSSSGAASALPASTLMPPREARPRPKACSNSAPSSSRKPAATPKFTP
ASSPRPRPPSPRPPSAQKPRSSPKLPPVPKPPSGSKPRSPSSPKPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR036915Cyclin-like_sf