prot_P-canaliculata_contig107592.1000.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig107592.1000.1
Unique Nameprot_P-canaliculata_contig107592.1000.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length248
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig107592.1000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..248
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.776

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig107592contigP-canaliculata_contig107592:173..916 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig107592.1000.1mRNA_P-canaliculata_contig107592.1000.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig107592 173..916 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig107592.1000.1 ID=prot_P-canaliculata_contig107592.1000.1|Name=mRNA_P-canaliculata_contig107592.1000.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=248bp
MIVSRFLLSTAALAAVGLSPAHADVLLSGTYDSATTNANQVDVSATSAAN
PNQLDVAAFSTLVDAAFVAGTGGTITFDATGDIAESLTNPNSSNAVFADG
SVLAEVRRTIVGTGAASGDATRIPISGNLGFGGTQDFGFAFQSADSINAV
GITIISRSGQTAADATVTATFAATDGSGSQTVSQAFELGSSAGGDDTFFG
FAAPTGTFLTGLEIETPYFTRVDDLGITTAVPEPASLGLLAAGGTLLL
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