prot_P-canaliculata_contig10742.979.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig10742.979.1
Unique Name	prot_P-canaliculata_contig10742.979.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	273

Homology

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: D7FNN2_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNN2_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 1.310e-107
Identity = 158/257 (61.48%), Postives = 195/257 (75.88%), Query Frame = 0

Query:   23 MKSPVNRRCRRRFVSLSMATSAALTLVSGALFIGDVSAARRLATEPLVPIDAATLNSNLRHWTTDYAVMFYAPWCSHCKEMFMPMWEDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLKYYPTFMFFGAGKFHDHDPVSGLVLD-KPTLHDSSAKYPSTAMVYHEVMVSWVKTMHFISSSNRVISRSNIFGGNA----KASSEARLAAEIEALERQNHLLQEALEGTDGA-IQLPYGYGDPFKELWEV 273
            M +P  RR RRR      A   AL LVSG+L     ++A     EPL P+D ATL SN+RHWTTDYAVMFYAPWC HCKE+FMP+WEDV+ Q+A EDPRGKRKL++ KF+CEQ DT AA+FC ++NL++YPTFMFFGAGKFHDHDP+SG+VL  +PT HDSSAK+P+ A+VYHEV+  W KTMHFIS  NRV+ R N+FGG      +A+SE RL AEIEALER+NH LQ+A+ G +     LPYG+GDP+ ELW++
Sbjct:    1 MANPSIRRYRRRLSPAPSAAVTALLLVSGSLLGSCPTSASTSLAEPLAPLDTATLTSNMRHWTTDYAVMFYAPWCQHCKELFMPLWEDVSMQMAEEDPRGKRKLVLAKFNCEQ-DTTAAAFCQEINLQFYPTFMFFGAGKFHDHDPLSGMVLGPRPTEHDSSAKFPAGAVVYHEVLAGWTKTMHFISGYNRVMERLNVFGGRGGRKDRAASEERLLAEIEALERKNHQLQQAMTGGETQESSLPYGHGDPYNELWKM 256

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: A0A6H5L6A2_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A2_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 1.580e-105
Identity = 158/257 (61.48%), Postives = 194/257 (75.49%), Query Frame = 0

Query:   23 MKSPVNRRCRRRFVSLSMATSAALTLVSGALFIGDVSAARRLATEPLVPIDAATLNSNLRHWTTDYAVMFYAPWCSHCKEMFMPMWEDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLKYYPTFMFFGAGKFHDHDPVSGLVLD-KPTLHDSSAKYPSTAMVYHEVMVSWVKTMHFISSSNRVISRSNIFGGNA----KASSEARLAAEIEALERQNHLLQEALEGTDGA-IQLPYGYGDPFKELWEV 273
            M +P  RR RRR          AL LVSG+L     ++A     EPL P+D ATL SN+RHWTTDYAVMFYAPWC HCKE+FMP+WEDV+ Q+A EDPRGKRKL++GKF+CEQ DT AA+FC ++NL++YPTFMFFGAGKFHDHDP+SG+VL  +PT HDSSAK+P+ A+VYHEV+  W KTMHFIS  NRV+ R N+FG       +A+SE RL AEIEALER+NH LQ+A+ G +     LPYG+GDP+ ELW+V
Sbjct:    1 MANPSIRRYRRRVFPAPSVAVTALLLVSGSLLGSCPTSASTSLAEPLAPLDTATLTSNMRHWTTDYAVMFYAPWCQHCKELFMPLWEDVSMQMAEEDPRGKRKLVLGKFNCEQ-DTTAAAFCQEINLQFYPTFMFFGAGKFHDHDPLSGMVLGPRPTEHDSSAKFPAGAVVYHEVLAGWTKTMHFISGYNRVMERLNVFGSRGGRKDRAASEERLLAEIEALERKNHQLQQAMTGGEAQESSLPYGHGDPYNELWKV 256

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: A0A835YNV7_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNV7_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.950e-21
Identity = 65/186 (34.95%), Postives = 89/186 (47.85%), Query Frame = 0

Query:   34 RFVSLSMATSAALTLVSGALFIGDVSAARRLATEPLVPIDAATLNSNLRHWTTDYAVMFYAPWCSHCKEMFMPMWEDVAAQLAAEDPRGKRKLLVGKFDCEQ-QDTAAASFCHDVNLKYYPTFMFFGAGKFHDHDPVSGLVL--DKPTLHDSSAKYPSTAMVYHEVMVSWVKTMHFISSSNRVISR 216
            R+  L+ AT   L     A     V  AR L     V + A  L SNL  W  D AVMFYAPWC HCK+ F+P W  +A  + A         LVG+FDCE       A FC D+ ++ YPTF  FG G F D   ++ L     + T +D   ++    + Y+  +  WV+ M  +S+  R  +R
Sbjct:    3 RWAHLATATLGCLGAACAAAVYKAVDPARSL-----VELTAEDLQSNLEFWRQDIAVMFYAPWCPHCKK-FLPTWALIADDVKALYGTDDAAHLVGRFDCESLAHPDNAQFCSDIGIRSYPTFKVFGFGDFRDRSALASLAWWRRRDTTYDGVVEF--RGLRYYAALRDWVRAMFGVSALQRAQAR 180

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: A0A7S2XXY5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY5_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.860e-17
Identity = 61/192 (31.77%), Postives = 94/192 (48.96%), Query Frame = 0

Query:   40 MATSAALTLVSGALFIGDVSAARRLATEPLVP-IDAATLNSNLRHWTTDYAVMFYAPWCSHCKEMFMPMWEDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLKYYPTFMFFGAGKFHDHDPVSGLVLDKPTLHDSSAKYPST----AMVYHEVMVSWVKTMHFISSSNRVISRSNIFGGNAKA 226
            M TS    ++S   F+   S+A     +PLV  + A  +  N+  W +DY VMFYAPWC HC+++  P++E+++ ++   D      + +GKF+CE   T    FC+ +N+  YP  MFFG G F    P   L+  K  L  +    P       +++ E +  W KT        R +SR + F  N KA
Sbjct:    1 MGTSLLFAILSTIFFVLQASSA---PADPLVQQLSANDIVDNIEVWNSDYMVMFYAPWCPHCRQL-SPLYEEISKEITKPD------MQLGKFNCEGSQTNL-QFCNALNVDRYPMIMFFGYGSF----PQGNLL--KQALTKTQPALPQAISFDGLLFPEAIKDWAKTC-------RAVSRFHRFKDNVKA 168

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: A0A4T0CE66_AURPU (Thioredoxin-like protein n=1 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4T0CE66_AURPU)

HSP 1 Score: 67.8 bits (164), Expect = 3.720e-9
Identity = 36/103 (34.95%), Postives = 54/103 (52.43%), Query Frame = 0

Query:   70 VPIDAATLNSNLRHWTTDYAVMFYAPWCSHCKEMFMPMWEDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLKYYPTFMFFGAGKFHDHDPVSGL 172
            VP+ A T    +      + + FYAPWC HC+ M  P W  +A  +       K KL VG+ +CE +       C DVN+K YPT ++F AG+  +++ + GL
Sbjct:  289 VPLTAETFQQRVTTTHDPWFIKFYAPWCHHCQAM-APSWHAMARDM-------KGKLNVGEVNCEVE----RRLCKDVNVKGYPTLIYFQAGERIEYEGLRGL 379

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: A0A074XXA7_AURPU (Thioredoxin-like protein n=28 Tax=Aureobasidium TaxID=5579 RepID=A0A074XXA7_AURPU)

HSP 1 Score: 67.8 bits (164), Expect = 3.930e-9
Identity = 36/103 (34.95%), Postives = 54/103 (52.43%), Query Frame = 0

Query:   70 VPIDAATLNSNLRHWTTDYAVMFYAPWCSHCKEMFMPMWEDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLKYYPTFMFFGAGKFHDHDPVSGL 172
            VP+ A T    +      + + FYAPWC HC+ M  P W  +A  +       K KL VG+ +CE +       C DVN+K YPT ++F AG+  +++ + GL
Sbjct:  289 VPLTAETFQQRVTTTHDPWFIKFYAPWCHHCQAM-APSWHAMARDM-------KGKLNVGEVNCEVE----RRLCKDVNVKGYPTLIYFQAGERIEYEGLRGL 379

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: A0A1S3DB21_DIACI (thioredoxin domain-containing protein 5 homolog n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3DB21_DIACI)

HSP 1 Score: 64.3 bits (155), Expect = 4.080e-8
Identity = 41/120 (34.17%), Postives = 58/120 (48.33%), Query Frame = 0

Query:   87 DYAVMFYAPWCSHCKEMFMPMWEDVAAQLA-AEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLKYYPTFMFFGAGKFHDHDPVSGLVLDKPTLHD-------SSAKYPSTAMVYHEVMV 198
            +Y +MFYAPWC HCK +  P+WE++A  L  +ED R    + +G+ DC    T     C D  +  YPT  FF  G   +     G   D PTL +        + K PS   + +E +V
Sbjct:   50 NYFIMFYAPWCGHCKNLH-PIWEELADMLNDSEDSR----VTIGQVDC----TVEKQLCADQEITGYPTLKFFKKGSESEASKFRG-TRDLPTLTNFINEQISETPKEPSDKPIVNEGLV 159

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: UPI001F5FD744 (thioredoxin domain-containing protein 5 homolog n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5FD744)

HSP 1 Score: 63.9 bits (154), Expect = 5.410e-8
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0

Query:   86 TDYAVMFYAPWCSHCKEMFMPMWEDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLKYYPTFMFFGAGK 162
            T++ VMFYAPWC HCK +  P W+ +A +   +D  G   L +GK DC ++     + C + ++  YPT  FF AG+
Sbjct:   49 TNHFVMFYAPWCGHCKNL-APTWDQLAEKYHKDDNSG---LTIGKVDCVKE----TALCSEQDVTGYPTLKFFKAGE 117

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: A0A8D9BKJ5_9HEMI (Thioredoxin domain-containing protein 5 (Fragment) n=3 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9BKJ5_9HEMI)

HSP 1 Score: 62.4 bits (150), Expect = 5.550e-8
Identity = 33/80 (41.25%), Postives = 44/80 (55.00%), Query Frame = 0

Query:   87 DYAVMFYAPWCSHCKEMFMPMWEDVAAQLA-AEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLKYYPTFMFFGAGKFHD 165
            +Y VMFYAPWC HCK +  P+WE++A  L  +ED R    + +G+ DC    T     C D ++  YPT  FF  G   D
Sbjct:   49 NYFVMFYAPWCGHCKNLH-PIWEELADMLNDSEDSR----VTIGQVDC----TVEKQLCADQDITGYPTLKFFKKGSDTD 119

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BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Match: UPI001E1D2701 (thioredoxin domain-containing protein 5-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2701)

HSP 1 Score: 63.9 bits (154), Expect = 5.670e-8
Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = 0

Query:   90 VMFYAPWCSHCKEMFMPMWEDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLKYYPTFMFF 158
            VMFYAPWC HCK +  P W+D+A ++  ED    RKL VGK DC    T     C +  ++ YPT  +F
Sbjct:   47 VMFYAPWCGHCKRL-APTWDDLAKEINVED----RKLTVGKVDC----TKEPGLCGEHQVRGYPTVKWF 106

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig10742.979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNN2_ECTSI	1.310e-107	61.48	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5L6A2_9PHAE	1.580e-105	61.48	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
A0A835YNV7_9STRA	3.950e-21	34.95	Thioredoxin domain-containing protein n=1 Tax=Trib...	[more]
A0A7S2XXY5_9STRA	2.860e-17	31.77	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A4T0CE66_AURPU	3.720e-9	34.95	Thioredoxin-like protein n=1 Tax=Aureobasidium pul...	[more]
A0A074XXA7_AURPU	3.930e-9	34.95	Thioredoxin-like protein n=28 Tax=Aureobasidium Ta...	[more]
A0A1S3DB21_DIACI	4.080e-8	34.17	thioredoxin domain-containing protein 5 homolog n=...	[more]
UPI001F5FD744	5.410e-8	38.96	thioredoxin domain-containing protein 5 homolog n=...	[more]
A0A8D9BKJ5_9HEMI	5.550e-8	41.25	Thioredoxin domain-containing protein 5 (Fragment)...	[more]
UPI001E1D2701	5.670e-8	44.93	thioredoxin domain-containing protein 5-like n=1 T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 229..256
None	No IPR available	GENE3D	3.40.30.10		coord: 65..218 e-value: 7.3E-20 score: 73.2
None	No IPR available	PANTHER	PTHR45672	FAMILY NOT NAMED	coord: 70..162
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..60
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 44..55
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..43
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 56..60
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 61..273
None	No IPR available	TMHMM	TMhelix		coord: 34..56
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 74..163 e-value: 2.8E-13 score: 49.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 63..206 score: 11.033
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 65..186

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig10742	contig	P-canaliculata_contig10742:111..4845 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig10742.979.1	mRNA_P-canaliculata_contig10742.979.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig10742 111..4894 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig10742.979.1 ID=prot_P-canaliculata_contig10742.979.1|Name=mRNA_P-canaliculata_contig10742.979.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=273bp
MIINYLYISPASTRQTPMEKNVMKSPVNRRCRRRFVSLSMATSAALTLVS
GALFIGDVSAARRLATEPLVPIDAATLNSNLRHWTTDYAVMFYAPWCSHC
KEMFMPMWEDVAAQLAAEDPRGKRKLLVGKFDCEQQDTAAASFCHDVNLK
YYPTFMFFGAGKFHDHDPVSGLVLDKPTLHDSSAKYPSTAMVYHEVMVSW
VKTMHFISSSNRVISRSNIFGGNAKASSEARLAAEIEALERQNHLLQEAL
EGTDGAIQLPYGYGDPFKELWEV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR036249	Thioredoxin-like_sf