prot_P-canaliculata_contig103989.549.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig103989.549.1
Unique Nameprot_P-canaliculata_contig103989.549.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length232
Homology
BLAST of mRNA_P-canaliculata_contig103989.549.1 vs. uniprot
Match: A0A2E7ME23_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7ME23_9DELT)

HSP 1 Score: 236 bits (601), Expect = 2.350e-72
Identity = 117/234 (50.00%), Postives = 161/234 (68.80%), Query Frame = 0
Query:    1 MRVEQVSIAYQPIDGLHFKAGQMRVPFTVDQFSGNTQLMFPTRSAPTQVFLRGTDLGATAEYDWKSIA-RISAGVFNGARIS-GNGDSRGLLYSVRADVNPLGPMPGQQADFDRGGLRLGLGAGMVYLPTTSFDSSGFASVSSRDLRGSASVRLAYRGFYFQAEALRRQRTDNLTARPLIATGGYGQASFYLPIKGRFSLAPIARVGFTREDQSFSPRDSLWTEAGTTLYFGRN 232
            M +E++S+++ P+  L  K GQMR+PFT    S N +LMFP RSAP  VFLRG+DLG  A+        R++ GVFNG+ +S G    RG L++ R D NPLG  P  + D +RG  RLG+G G+++ P+T +D +G+AS  +RDLR S S+R+A RGF+ QAE LR QRTD+L++RP +ATG YGQ SF + + GRF +APIARVG+T EDQ F PR +++ E G  LY G++
Sbjct:  177 MALEELSVSWSPLAILELKLGQMRIPFTAQHQSPNAELMFPDRSAPNAVFLRGSDLGGLADLRLGGERFRLALGVFNGSGLSSGRSSERGPLFAARIDANPLGAFPFGEGDLERGPFRLGVGGGLLWFPSTIYDRAGYASAQARDLRVSGSLRIAVRGFFLQAELLRYQRTDSLSSRPELATGAYGQMSFLVAVPGRFGVAPIARVGWTAEDQGFDPRQTVFVEGGVALYLGKD 410          
BLAST of mRNA_P-canaliculata_contig103989.549.1 vs. uniprot
Match: UPI0019C6CC8F (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019C6CC8F)

HSP 1 Score: 192 bits (487), Expect = 9.710e-56
Identity = 109/242 (45.04%), Postives = 144/242 (59.50%), Query Frame = 0
Query:    3 VEQVSIAYQPIDG-----------LHFKAGQMRVPFTVDQFSGNTQLMFPTRSAPTQVFLRGTDLGATAEYD-WKSIARISAGVFNGARIS-GNGDSRGLLYSVRADVNPLGPMPGQQADFDRGGLRLGLGAGMVYLPTTSFDSSGF-ASVSSRDLRGSASVRLAYRGFYFQAEALRRQRTDNLTARPLIATGGYGQASFYLPIKGRFSLAPIARVGFTREDQSFSPRDSLWTEAGTTLYFG 230
            VE++S+ Y+P+D            L  K GQ+R+P+TV Q   N  LMFP RSAP  VFL GTDLGA A     +    +SAGVFNG  ++    + RG LYS R D+NPLG     + D +R   R G+G G +Y P+  +D +G      +RDLR SAS+R++ RGFY QAE LRRQRTD L++ P I+ G Y Q+S ++ +     +API R G+T  DQ  SPR  L+ EAG  LY G
Sbjct:  128 VEELSVRYRPVDAKRSDRDASLVHLDLKLGQLRIPWTVQQKVFNAALMFPRRSAPNDVFLFGTDLGALASLGVLEDRVELSAGVFNGTGLAVQRSNERGALYSGRLDINPLGGFAYNEGDLERERFRFGVGTGALYFPSRLYDDAGNDTGTRARDLRVSASLRMSVRGFYVQAEYLRRQRTDALSSLPRISQGAYVQSSMFVALPRELGIAPIGRFGWTTTDQRVSPRTVLYGEAGVALYLG 369          
BLAST of mRNA_P-canaliculata_contig103989.549.1 vs. uniprot
Match: A0A2E2NQ38_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E2NQ38_9DELT)

HSP 1 Score: 187 bits (475), Expect = 2.850e-54
Identity = 100/227 (44.05%), Postives = 140/227 (61.67%), Query Frame = 0
Query:    3 VEQVSIAYQPIDGLHFKAGQMRVPFTVDQFSGNTQLMFPTRSAPTQVFLRGTDLGATAEYD-WKSIARISAGVFNGARISGNGDSRGLLYSVRADVNPLGPMPGQQADFDRGGLRLGLGAGMVYLPTTSFDSSGFASVSSRDLRGSASVRLAYRGFYFQAEALRRQRTDNLTARPLIATGGYGQASFYLPIKGRFSLAPIARVGFTREDQSFSPRDSLWTEAGTTLY 228
            V + ++ Y+P+D  + + GQMR+PFT    S NT LMFP R+ P +VFLRG+DLG  AE + W      S G FNGA     G++ G+LY+ R D+NPLG     +     G  R G+G+G++Y P T++DS+G+ +VS  D R SAS R+A+ G Y   E L RQ  D+ ++RP  ATG YGQA ++LP KG     P+ R+G T  DQ F PR ++W +AG  +Y
Sbjct:  114 VVESTVTYRPVDAFNLRLGQMRIPFTSQAQSPNTDLMFPERAGPNEVFLRGSDLGVLAETNLWDERVLGSIGTFNGANAGLYGNTHGVLYTARIDLNPLGSFGFSETSEWAGPFRFGVGSGIIYNPYTAYDSAGYPTVSIADSRLSASGRIAFYGLYVVGEYLYRQELDSQSSRPDKATGWYGQAGWHLP-KG---FEPMFRMGETTNDQGFDPRKTVWLDAGLNIY 336          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig103989.549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2E7ME23_9DELT2.350e-7250.00Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
UPI0019C6CC8F9.710e-5645.04Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A2E2NQ38_9DELT2.850e-5444.05Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010870Phosphate-selective porin O/PPFAMPF07396Porin_O_Pcoord: 3..191
e-value: 1.9E-6
score: 27.3
IPR023614Porin domain superfamilyGENE3D2.40.160.10coord: 1..191
e-value: 7.3E-13
score: 50.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig103989contigP-canaliculata_contig103989:4..699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig103989.549.1mRNA_P-canaliculata_contig103989.549.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig103989 4..729 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig103989.549.1 ID=prot_P-canaliculata_contig103989.549.1|Name=mRNA_P-canaliculata_contig103989.549.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=232bp
MRVEQVSIAYQPIDGLHFKAGQMRVPFTVDQFSGNTQLMFPTRSAPTQVF
LRGTDLGATAEYDWKSIARISAGVFNGARISGNGDSRGLLYSVRADVNPL
GPMPGQQADFDRGGLRLGLGAGMVYLPTTSFDSSGFASVSSRDLRGSASV
RLAYRGFYFQAEALRRQRTDNLTARPLIATGGYGQASFYLPIKGRFSLAP
IARVGFTREDQSFSPRDSLWTEAGTTLYFGRN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010870Porin_O/P
IPR023614Porin_dom_sf