prot_P-canaliculata_contig10247.387.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10247.387.1
Unique Nameprot_P-canaliculata_contig10247.387.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length199
Homology
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: D7FMW6_ECTSI (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW6_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 1.200e-105
Identity = 158/196 (80.61%), Postives = 173/196 (88.27%), Query Frame = 0
Query:    3 RTAKMMSETTTTTTDEPGVEAAPRGELTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSPLPGPIS 198
            RT  MMS+   T  +E    AAP GELTELARLEIR+G I+EI+RHPDADSLYVEKVD+G GEEEGPRTIVSGLVNFC+ESDLLGR+VVVLCNLKPV+MKGV SAGMLLCSSNEDH+KVEPL PP GVPLGELVTF+GHL SPV+AGNRAGKAWK+ASKTL VDD++ AKFTGE LPA FMTSKGPITSPLPG IS
Sbjct:   65 RTMMMMSDAAVT--EEEAAPAAPTGELTELARLEIRIGKIVEIARHPDADSLYVEKVDLGQGEEEGPRTIVSGLVNFCEESDLLGRDVVVLCNLKPVNMKGVTSAGMLLCSSNEDHSKVEPLCPPEGVPLGELVTFDGHLPSPVDAGNRAGKAWKRASKTLAVDDSEEAKFTGEKLPATFMTSKGPITSPLPGSIS 258          
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: A0A835YNH3_9STRA (Endothelial monocyte-activating polypeptide II pro-EMAP II family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH3_9STRA)

HSP 1 Score: 251 bits (640), Expect = 2.250e-81
Identity = 127/176 (72.16%), Postives = 146/176 (82.95%), Query Frame = 0
Query:   23 AAPRGELTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSPLPGPIS 198
            AAP G+LTELARLE+RVG I+EI RHPDAD LYVEK+DIG  E  GPRTIVSGLV +C E+DLL R+VV+L NLKPV+M+GV SAGM+LCSSN DHT+V PL PP G PLGELVTFEGHL++PVEAGNRA KAWKK +KT+ V +  VA+FT E LPA F TSKG +TSPLPG IS
Sbjct:   71 AAPVGQLTELARLEMRVGRIVEIGRHPDADGLYVEKIDIG--EPAGPRTIVSGLVAYCSEADLLNRDVVILANLKPVNMRGVESAGMVLCSSNADHTQVAPLVPPEGTPLGELVTFEGHLAAPVEAGNRAVKAWKKVAKTVAVGEDGVARFTDEALPAAFATSKGVVTSPLPGNIS 244          
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: W7U6C4_9STRA (Endothelial monocyte-activating polypeptide ii pro-emap ii family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 2.060e-64
Identity = 109/178 (61.24%), Postives = 135/178 (75.84%), Query Frame = 0
Query:   21 VEAAPRGELTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSPLPGPIS 198
            V  AP+GELTEL+RLEIR G ILEISRHP+AD LYVEK+D+G  E +GPRTIVSGLV +  E +LLGR VVVL NLKP ++KG+ S GMLLC+SNEDHT V+PLSPP GV LGEL+TFEGH ++P   GNRAGKA+ + ++ L   +  +A + G      FMTSKGP+T+ + G IS
Sbjct:  189 VVEAPKGELTELSRLEIRTGKILEISRHPEADGLYVEKIDLG--EADGPRTIVSGLVKYQTEEELLGREVVVLANLKPRALKGITSHGMLLCASNEDHTVVKPLSPPPGVALGELITFEGHRAAPEPPGNRAGKAFDRVAEELGAGEDMIATYKG----IPFMTSKGPVTTGMAGSIS 360          
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: A0A7S0XDL6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL6_9STRA)

HSP 1 Score: 193 bits (491), Expect = 3.560e-59
Identity = 99/171 (57.89%), Postives = 124/171 (72.51%), Query Frame = 0
Query:   28 ELTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSPLPGPIS 198
            ELTEL+RLEIRVG I+E+ RHP+AD LYVEK+D+G  E  GPRTIVSGLV FC    LL  NV+VLCNLKP ++KG+ S GM+LC++++D TKV+PL PP   P+G+L+TFEGHLS PVE GNRA KA+ K +    V++  VA + G      F T  GP+TS L G IS
Sbjct:   51 ELTELSRLEIRVGKIVEVGRHPEADGLYVEKIDLG--EPTGPRTIVSGLVQFCTVDRLLNNNVIVLCNLKPRALKGITSNGMVLCTTSKDETKVDPLIPPPDAPIGQLITFEGHLSEPVEPGNRATKAFTKIADGFYVNEQGVATYNG----IPFSTPNGPVTSTLIGKIS 215          
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: A0A7S3M138_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M138_9STRA)

HSP 1 Score: 193 bits (491), Expect = 6.620e-59
Identity = 110/177 (62.15%), Postives = 124/177 (70.06%), Query Frame = 0
Query:   23 AAPRGELTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSP-LPGPIS 198
            A P G+  E   LEIRVG ILEI +HP+ADSLYVEKVD+G  E  GPRTIVSGLV FC    LL R+VVVLCNLKP + KG+ S GMLLCSSN+   KVEPL PP GVP GELV+FEGH+  P E GNRA KA+ K S    V D+ +A + G      FMTSKGPITS  L GPIS
Sbjct:   67 AKPSGDSIEA--LEIRVGKILEIGKHPEADSLYVEKVDLG--ESSGPRTIVSGLVEFCTAEYLLNRDVVVLCNLKPRAFKGINSQGMLLCSSNKADGKVEPLIPPAGVPAGELVSFEGHVIKPEEPGNRATKAYTKVSGDFVVSDSGIATYKG----IPFMTSKGPITSTILKGPIS 235          
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: A0A5J4Z2W6_PORPP (Putative methionine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2W6_PORPP)

HSP 1 Score: 187 bits (476), Expect = 2.380e-56
Identity = 100/172 (58.14%), Postives = 127/172 (73.84%), Query Frame = 0
Query:   29 LTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSP--LPGPIS 198
            LTEL+RLEIRVG I++  +HP+ADSLYVE+VD+G  +E G R IVSGLV+F    +++ R V+VLCNLKP +M+G+ S GMLLC+SNEDH++V+PL+ P GVP+G LVTFEGH S P  AGNRA KA+ K +K+L  D T VA F  E +P  F T  GP  SP  L GP+S
Sbjct:   92 LTELSRLEIRVGKIIKCEKHPEADSLYVEEVDVG--DESGARVIVSGLVSFVPLEEMVDRTVIVLCNLKPRNMRGISSHGMLLCASNEDHSQVDPLTAPEGVPIGALVTFEGHRSEPAPAGNRASKAFDKVAKSLRTDATGVAMF--EQVP--FATPSGPCFSPKKLVGPVS 257          
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: A0A7S2R5F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5F0_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.780e-56
Identity = 94/172 (54.65%), Postives = 127/172 (73.84%), Query Frame = 0
Query:   22 EAAPRGELTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSPL 193
            E AP GE+TEL+RLEIRVG ILE++ HP  + ++VEK+D+G   E+ PRTI SGL ++ +E DLL ++ +VLCNLKP  + GV S GM+LC+S+ +HT V+ + PP GV  GELVTF+GHL++PV+AGNRA KA+KK +   + DD+  A FTGE   + F TS GP TSP+
Sbjct:   66 EVAPVGEMTELSRLEIRVGKILEVAVHPTKEKIFVEKIDVG---EDEPRTICSGLRDYLKEDDLLNKDCIVLCNLKPRDLDGVPSNGMVLCASDAEHTDVQLVVPPAGVAAGELVTFDGHLAAPVDAGNRAVKAFKKVAGLFKTDDSGAAVFTGEPA-SSFQTSSGPCTSPI 233          
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: A0A7S0ZE83_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE83_9RHOD)

HSP 1 Score: 186 bits (473), Expect = 3.190e-56
Identity = 102/200 (51.00%), Postives = 129/200 (64.50%), Query Frame = 0
Query:    1 MCRTAKMMSETTTTTTDEPGVEAAPRGELTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSP--LPGPIS 198
            MC  +    E      D    E  P   LTEL+RLEIRVG ++E  RHPDAD+LYVEKVD+G   E+ PRTIVSGLVNF  + +L GR V+VLCNLKP +M+G+ S GMLLC+SNEDHTKV+PL+ P    +G L+TFEGH ++P++AGNRA KA+ K +     D   +A+F        FMT  G   SP  L G +S
Sbjct:   43 MCEASGESDENKVQVVDRNYEEELP---LTELSRLEIRVGKVVECERHPDADTLYVEKVDVG---EDEPRTIVSGLVNFMSQEELNGRTVIVLCNLKPRAMRGIKSHGMLLCASNEDHTKVDPLTAPPDAAIGSLITFEGHRAAPMDAGNRASKAFDKVASEFNTDADGIARFNA----TPFMTEAGACYSPAKLQGSVS 232          
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: A0A7S2V4I0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I0_9STRA)

HSP 1 Score: 187 bits (474), Expect = 3.340e-56
Identity = 103/183 (56.28%), Postives = 126/183 (68.85%), Query Frame = 0
Query:   16 TDEPGVEAAPRGELTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSPLPGPIS 198
            TD     AAP GEL E +RLEIRVG I+++S HPDAD LYVEK+D G   E+ PRTIVSGLV + +  DLL R+VVVL NLKP +M+G+ S GMLLC+SNEDH++V PLSPP     GEL+T EG LS P+E  NRA KA+ K +K L V+D   A F G+     F+T  GP TS + G IS
Sbjct:   70 TDAKEEAAAPAGELNEFSRLEIRVGKIVDVSVHPDADGLYVEKIDCG---EDEPRTIVSGLVKYLKAEDLLDRSVVVLANLKPRAMRGITSHGMLLCASNEDHSQVVPLSPPESSVPGELITVEGTLSQPLEPCNRASKAFDKVAKDLYVNDDLQATFDGKP----FLTPNGPCTSTMKGAIS 245          
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Match: A0A2V3IUX7_9FLOR (Putative methionine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX7_9FLOR)

HSP 1 Score: 182 bits (462), Expect = 5.840e-54
Identity = 103/187 (55.08%), Postives = 128/187 (68.45%), Query Frame = 0
Query:    9 SETTTTTTDEPGV----EAAPRGELTELARLEIRVGNILEISRHPDADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVSMKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGNRAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITS 191
            S TT  T   P      ++AP   LTEL+RLEIRVG I+E  +HPDAD+LYVEKVD+G   EE PRTIVSGLV +     ++GR+VVVLCNLKP +M+GV S GMLLC+SNEDHT V+PL  P   P+GELVTFEGH S+P++  NRA KA+ + +  L  ++  VA F  E +P  F TS GP  S
Sbjct:   91 SFTTVATAQAPAAVGDGDSAPDLPLTELSRLEIRVGKIIECEKHPDADTLYVEKVDVG---EEEPRTIVSGLVKYIPLEKMVGRSVVVLCNLKPRAMRGVTSHGMLLCASNEDHTVVDPLCAPQDTPIGELVTFEGHKSAPIDPSNRATKAFDRVADGLSTNEAGVAMF--EDVP--FSTSAGPCFS 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10247.387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMW6_ECTSI1.200e-10580.61Endothelial monocyte-activating polypeptide II pro... [more]
A0A835YNH3_9STRA2.250e-8172.16Endothelial monocyte-activating polypeptide II pro... [more]
W7U6C4_9STRA2.060e-6461.24Endothelial monocyte-activating polypeptide ii pro... [more]
A0A7S0XDL6_9STRA3.560e-5957.89Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3M138_9STRA6.620e-5962.15Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A5J4Z2W6_PORPP2.380e-5658.14Putative methionine--tRNA ligase n=1 Tax=Porphyrid... [more]
A0A7S2R5F0_9STRA2.780e-5654.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0ZE83_9RHOD3.190e-5651.00Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S2V4I0_9STRA3.340e-5656.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2V3IUX7_9FLOR5.840e-5455.08Putative methionine--tRNA ligase n=1 Tax=Gracilari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 28..194
e-value: 2.0E-49
score: 169.6
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 6..195
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 37..134
e-value: 3.4E-29
score: 100.8
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 31..137
score: 30.649
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 32..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10247contigP-canaliculata_contig10247:2326..4375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10247.387.1mRNA_P-canaliculata_contig10247.387.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10247 2200..4760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10247.387.1 ID=prot_P-canaliculata_contig10247.387.1|Name=mRNA_P-canaliculata_contig10247.387.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=199bp
MCRTAKMMSETTTTTTDEPGVEAAPRGELTELARLEIRVGNILEISRHPD
ADSLYVEKVDIGAGEEEGPRTIVSGLVNFCQESDLLGRNVVVLCNLKPVS
MKGVLSAGMLLCSSNEDHTKVEPLSPPTGVPLGELVTFEGHLSSPVEAGN
RAGKAWKKASKTLEVDDTKVAKFTGETLPAHFMTSKGPITSPLPGPIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold