prot_P-canaliculata_contig102171.345.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig102171.345.1
Unique Nameprot_P-canaliculata_contig102171.345.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length170
Homology
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A7W0G8P5_9ACTN (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0G8P5_9ACTN)

HSP 1 Score: 136 bits (343), Expect = 1.960e-36
Identity = 79/163 (48.47%), Postives = 107/163 (65.64%), Query Frame = 0
Query:    1 DYDGDGLLGTDEDGDGDQVYGTIMGG------VNGISDNGRVMIVTSGRFLEQVNLAGTGVTVLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLEIRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQVNSSGFR 157
            DYDGDG +GT ED DGD+V+GTI G           ++NG + IVTSG F EQV L+G     LEAA GV A ++A + G D G +  RQ QPGII+++  +  + +RNI SRNWT G QI G +RV L+ VR + N NYGI + G+++V I+DS+V ++G R
Sbjct:   41 DYDGDGRIGTAEDNDGDRVFGTINGANTTGSAATRANNNGTITIVTSGLFAEQVTLSGN--VTLEAAAGVEANLDAVRQG-DPG-STARQGQPGIIVNAPANRQVVVRNIQSRNWTSGFQINGDSRVALEGVRAEHNTNYGIEITGNAKVAISDSEVYATGRR 199          
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A838SPF0_9ACTN (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Acidothermales bacterium TaxID=2740546 RepID=A0A838SPF0_9ACTN)

HSP 1 Score: 135 bits (341), Expect = 3.450e-36
Identity = 80/168 (47.62%), Postives = 105/168 (62.50%), Query Frame = 0
Query:    1 DYDGDGLLGTDEDGDGDQVYGTIMGGVNGISDNGRVMIVTSGRFLEQVNLAGTGVT--VLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLEIRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQVNSSGFRRSGSLGLTP 166
            DYDGDG +G  ED DGD  YG+I   V+ +++NGRV IV +G F E V LA TG     LEAAPGV+A ++A   G     N  RQ  PGIII       + +RN+++RNWTDG+ I G + V LD VR ++N+NYGI+    SRV I +S VN++GFR   +   TP
Sbjct:   65 DYDGDGNIGATEDNDGDNNYGSIGAAVDAVANNGRVTIVANGIFPEVVRLAPTGGANISLEAAPGVDANIDAVVQGQPG--NAERQMAPGIIIDGCDDCRVTVRNVMTRNWTDGVLILGRSHVALDEVRAENNLNYGIHASSRSRVAIRNSDVNATGFRADANGPGTP 230          
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A838PU41_9ACTN (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Euzebyaceae bacterium TaxID=2740542 RepID=A0A838PU41_9ACTN)

HSP 1 Score: 134 bits (338), Expect = 1.170e-35
Identity = 75/161 (46.58%), Postives = 107/161 (66.46%), Query Frame = 0
Query:    1 DYDGDGLLGTDEDGDGDQVYGTIMGGVNGISDNGRVMIVTSGRFLEQVNL--AGTGVTVLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLEIRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQVNSSGFRRS 159
            DYDGDG +G  ED DGD  +GTI   +  ++ NGRV IV +G + E V L     G   LEAAPGV+A ++A   G D G  + RQQ+PGII+       + +RN+++RNWTDG+Q+RG + + LD V  ++N+NYGI V   ++V I++SQVN+SGFR++
Sbjct:   67 DYDGDGSIGMAEDNDGDNNFGTINAALTAVAQNGRVTIVANGTYGEVVTLNPVERGNVTLEAAPGVSANIDAVVQG-DPGSTD-RQQRPGIIVDGCRRCRVTVRNVITRNWTDGVQVRGFSHLHLDQVISENNLNYGIRVKNRAKVSISNSQVNASGFRKN 225          
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A7W1AXH5_9HYPH (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W1AXH5_9HYPH)

HSP 1 Score: 134 bits (336), Expect = 1.190e-35
Identity = 78/176 (44.32%), Postives = 113/176 (64.20%), Query Frame = 0
Query:    1 DYDGDGLLGTDEDGDGDQVYGTIMG-----GVNGISDNGRVMIVTSGRFLEQVNL-AGTGVTVLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLEIRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQVNSSGFRRSGSLGLTPGGDI 170
            D+DGDG +G  ED DGD+V+GTIMG     G  G++ NG+V IVTSG F+  V + A  G   L+AAPGV AV++A   G    ++  RQ +PGI + + G+  + IRN+  RNWT GI++   +RV +++VR+++N+NYGI V G ++V +  SQV ++GFR S      P GD 
Sbjct:   35 DFDGDGKIGFAEDNDGDRVFGTIMGALGDSGGTGVNQNGQVTIVTSGVFVGPVFITAANGNVTLQAAPGVEAVIDAVLQGDP--QSTARQGRPGITVQAPGNRRVVIRNLTVRNWTTGIRVGDGSRVAIESVRVENNINYGIEVGGRAKVKVDQSQVIATGFRNS------PAGDF 202          
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A7V9HYA6_9BACT (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7V9HYA6_9BACT)

HSP 1 Score: 132 bits (332), Expect = 1.050e-34
Identity = 79/163 (48.47%), Postives = 106/163 (65.03%), Query Frame = 0
Query:    1 DYDGDGLLGTDEDGDGDQVYGTIM-----GGVNGISDNGRVMIVTSGRFLEQVNL-AGTGVTVLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLEIRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQVNSSGFR 157
            DYDGDG +GT ED DGD+V+GTI      GG  G + NGRV+IVTSG F E V++ A  G   LEAA GV A V+A   G D G N  RQQ PGII+++     + IRNIVSRNWT+GI++ GS++V +D+ R+++N NY             ++QV+++GFR
Sbjct:   64 DYDGDGRIGTAEDTDGDRVFGTITAALGAGGGTGANQNGRVVIVTSGTFAEVVSITAANGNVTLEAAQGVEANVDAVLQG-DPG-NGARQQAPGIIVNAPADRFVTIRNIVSRNWTEGIRVSGSSKVLIDDCRIENNTNYXXXXXXXXXXXXNNTQVSATGFR 224          
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A7V9J413_9BACT (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7V9J413_9BACT)

HSP 1 Score: 119 bits (298), Expect = 7.500e-30
Identity = 76/168 (45.24%), Postives = 102/168 (60.71%), Query Frame = 0
Query:    1 DYDGDGLLGTDEDGDGDQVYGTIMG--GVNGISDNGRVMIVTSGRFLEQVNLAGTGVTVLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLEIRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQVNSSGFRRSGSLGLTP 166
            DYDGDGL+G             I G  G  GI++NG + IVTSG F EQV L  TG   L+AAPGV A ++A   G D+G +  RQ QPGII+++  +  + +RN+ SRNWT GIQ+ G +R+ +D  RL+ NVNYGI V   ++V I  S V ++GFR +   G  P
Sbjct:   61 DYDGDGLIGXXXXXXXXXXXXXIAGANGTLGINNNGTITIVTSGTFPEQVTL--TGNVTLQAAPGVEANIDAVLQG-DSG-SIARQGQPGIIVNAPANRYVVLRNLTSRNWTSGIQVLGESRLAIDGCRLEHNVNYGIEVRDTAKVKIDQSAVAATGFRLNPDTGDFP 224          
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A7W0ST77_9ACTN (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0ST77_9ACTN)

HSP 1 Score: 120 bits (300), Expect = 1.210e-29
Identity = 75/178 (42.13%), Postives = 107/178 (60.11%), Query Frame = 0
Query:    1 DYDGDGLLGTDEDGD-GDQVYGTIMGGVN---------GISDNGRVMIVTSGRFLEQVNL--AGTGVTVLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLEIRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQVNSSGFRRSGSLGLTP 166
            D+DGDG LGT ED D  D+V+GTI G +          G + NG V IV+SG F E V++  AG  VTV +AAPGV A ++A   GG              ++++  +  + IRNI SRNWT GIQ+ G++RV ++NVR+++N+NYG+ V   +RV I+ S+V  +GFR +   G  P
Sbjct:   54 DFDGDGRLGTAEDTDEADRVFGTINGALGAGTVEGVSTGANQNGSVTIVSSGVFPEVVSITAAGGNVTV-QAAPGVEANIDAVLQGGAGAXXXXXXXXXXXVVNAPSNRYVVIRNITSRNWTSGIQVLGASRVAIENVRMENNINYGVEVADSARVAISKSEVLGTGFRNNPMTGNFP 230          
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A7W1HD60_9BACT (Right-handed parallel beta-helix repeat-containing protein n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1HD60_9BACT)

HSP 1 Score: 118 bits (295), Expect = 2.580e-29
Identity = 74/164 (45.12%), Postives = 100/164 (60.98%), Query Frame = 0
Query:    1 DYDGDGLLGTDEDGDG--DQVYGTIMGGVN--GISDNGRVMIVTSGRFLEQVNLAGTGVTVLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLE-IRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQVNSSGFRRS 159
            DYDGDG +GT ED D   D+V+GTI   +   GI+ NG + IV SG F E V+L G     L+AAPGV A ++A   G   G    RQ QPGII++S      + IRNI S+NWT GI++ G +RV ++N RL++NVNYG          I+D++V  +G+R S
Sbjct:   57 DYDGDGRIGTAEDTDAPFDRVFGTINAALGPVGINQNGTITIVASGIFPETVSLLGN--VTLQAAPGVEANIDAVLQGDPGG--TARQGQPGIIVNSGSLGHTQVIRNITSKNWTSGIRVMGQSRVAIENCRLENNVNYGXXXXXXXXXXISDTKVRGTGYRIS 216          
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A6J4JSK1_9BACT (Beta_helix domain-containing protein n=1 Tax=uncultured Armatimonadetes bacterium TaxID=157466 RepID=A0A6J4JSK1_9BACT)

HSP 1 Score: 112 bits (281), Expect = 3.130e-27
Identity = 75/189 (39.68%), Postives = 111/189 (58.73%), Query Frame = 0
Query:    1 DYDGDGLLGTDEDGDG--DQVYGTI---MGGVNG-ISDNGRVMIVTSGRFLEQVNLAG----------TGVTVLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHS-DGSFPLEIRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQVNSSGFR--RSGSLGLTPGGDI 170
            D+DGDGL+GT ED D   D+V+GT+   +G  NG  + NGRV IVTSGRF E ++L+G           GV V+EAAPGV A ++A  AG DA     R+  PGI+I +      + +RN+V RNW  G+ +RG ARVT++  + DSN+   ++    +R+ +T+  +++ G R   +G     PG  +
Sbjct:   55 DFDGDGLIGTAEDTDNATDRVFGTLTAALGSANGGANGNGRVTIVTSGRFPEAIDLSGGAGASTGQTLNGVLVIEAAPGVVANIDAVLAG-DAAGTTAREALPGILIETAQTDRAVILRNLVVRNWAYGLLVRGGARVTVEGCKFDSNLAANVSAEDRARLTMTECSISAGGMRFTAAGKAAPDPGNGV 242          
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Match: A0A7V9P3R3_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9P3R3_9ACTN)

HSP 1 Score: 93.6 bits (231), Expect = 1.560e-21
Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 0
Query:   29 GISDNGRVMIVTSGRFLEQVNLAGTGVTV-LEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLEIRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGI 136
            G + NG+++IVTSG F E V + G  V V LEAAPGVNA V+A   G D G N  RQ  PGII++  G   + +RN+  RNWT G+ +RG + V++++ R+ +N N+GI
Sbjct:   10 GANQNGKIIIVTSGTFAETVTITGANVNVELEAAPGVNADVDAVLQG-DPG-NGARQNAPGIIVNVPGDRHVILRNLQVRNWTIGVDVRGDSHVSIEDSRVANNTNWGI 116          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102171.345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A7W0G8P5_9ACTN1.960e-3648.47Right-handed parallel beta-helix repeat-containing... [more]
A0A838SPF0_9ACTN3.450e-3647.62Right-handed parallel beta-helix repeat-containing... [more]
A0A838PU41_9ACTN1.170e-3546.58Right-handed parallel beta-helix repeat-containing... [more]
A0A7W1AXH5_9HYPH1.190e-3544.32Right-handed parallel beta-helix repeat-containing... [more]
A0A7V9HYA6_9BACT1.050e-3448.47Right-handed parallel beta-helix repeat-containing... [more]
A0A7V9J413_9BACT7.500e-3045.24Right-handed parallel beta-helix repeat-containing... [more]
A0A7W0ST77_9ACTN1.210e-2942.13Right-handed parallel beta-helix repeat-containing... [more]
A0A7W1HD60_9BACT2.580e-2945.12Right-handed parallel beta-helix repeat-containing... [more]
A0A6J4JSK1_9BACT3.130e-2739.68Beta_helix domain-containing protein n=1 Tax=uncul... [more]
A0A7V9P3R3_9ACTN1.560e-2146.79Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 28..162
e-value: 4.0E-7
score: 31.1
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 14..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102171contigP-canaliculata_contig102171:447..956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102171.345.1mRNA_P-canaliculata_contig102171.345.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig102171 447..956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig102171.345.1 ID=prot_P-canaliculata_contig102171.345.1|Name=mRNA_P-canaliculata_contig102171.345.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=170bp
DYDGDGLLGTDEDGDGDQVYGTIMGGVNGISDNGRVMIVTSGRFLEQVNL
AGTGVTVLEAAPGVNAVVEAFQAGGDAGENNTRQQQPGIIIHSDGSFPLE
IRNIVSRNWTDGIQIRGSARVTLDNVRLDSNVNYGINVLGDSRVVITDSQ
VNSSGFRRSGSLGLTPGGDI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence