prot_P-canaliculata_contig10209.323.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10209.323.1
Unique Nameprot_P-canaliculata_contig10209.323.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length326
Homology
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: A0A6H5KCI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI8_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 3.270e-102
Identity = 163/321 (50.78%), Postives = 210/321 (65.42%), Query Frame = 0
Query:    6 PAPIREVVTGAFHFCQFALTRWRPSTAMSAETTYHSSENLRREDRRKEIDEDGGGWGIHAGDTPGASRRRIDHGGDGDVGEDESPERSSGVPMHREGHPVKDKHTIFCTGSFAENVLLAPC-ESNAVRLWDLRDRTPAYTITPADAEGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRASSRTALMESRLHEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQK---GLCNVVNTFRSQHPGTACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIAHSQRIGGFASGSADSRVAIWNVFPE 322
            P P++ + TGAFHFCQFALTRWR       + + +S                            G    R     +GD  E  +P  ++     ++G  + D+       SFAENV+LAPC +   V LWDLR   P++T  P DAE KGMVMC RL+G+SPS ++P+A+ GHD+GHLC YDLRA+S   L+ESRLH+ PLLCVD+GSSC QGVSGSA  +I+VF ++ +K   G C VV +FR +HPGT+CVEIRRDQKLFVSGGWDHR+R FSW+ PRPLAVLRSH+ +V ++A+S RIGG  SGS DSRVA+W ++PE
Sbjct:  111 PQPLQVLPTGAFHFCQFALTRWREEARPKGKESTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQTGR-----EGDAAEP-APSAAADDGEAQQGSFLSDE------SSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRATSAEPLLESRLHKVPLLCVDVGSSCRQGVSGSADESINVFTLSTRKASCGSCEVVKSFRLEHPGTSCVEIRRDQKLFVSGGWDHRVRAFSWKTPRPLAVLRSHEKNVHTVAYSPRIGGLVSGSGDSRVAVWELYPE 419          
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: D8LT91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT91_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 8.440e-53
Identity = 109/255 (42.75%), Postives = 142/255 (55.69%), Query Frame = 0
Query:    3 APAPAPIREVVTGAFHFCQFALTRWRPSTAMSAETTYHSSENLRREDRRKEIDEDGGGWGIHAGDTPGASRRRIDHGGDGDVGEDESPERSSGVPMH----REGHPVKDKHTIFCTGSFAENVLLAPC-ESNAVRLWDLRDRTPAYTITPADAEGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRASSRTALMESRLHEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPGTA 252
            A  P P++ + TGAFHFCQFALTRWR       + + +SS                           G   R    G  G  GE   P  S+    +    ++G  + D+       SFAENV+LAPC +   V LWDLR   P++T  P DAE KGMVMC RL+G+SPS ++P+A+ GHD+GHLC YDLRA+S   L+E RLH+ PLLCVD+GSSC QGVSGSA  +I+VF ++ +K  C          PG+A
Sbjct:  108 AITPQPLQVLPTGAFHFCQFALTRWRDEARPKGKESTNSSXXXXXXXDPXXX--------XXXXXXQGEEERSPPCGQTGREGEAAEPAPSAAAAANDGEAQQGSFLSDE------SSFAENVMLAPCGQQTLVSLWDLRKARPSFTFAPKDAEQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRATSAEPLLEMRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGGGGVEVGSLPGSA 348          
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: A0A835YXT7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT7_9STRA)

HSP 1 Score: 127 bits (320), Expect = 4.530e-31
Identity = 76/188 (40.43%), Postives = 102/188 (54.26%), Query Frame = 0
Query:  122 LLAPCESNA-VRLWDLRDRTPAYTI-TPADA----EGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRA------SSRTALMESRLHEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPGTACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIA 297
            +LAPCE  + V+LWDLR + P  TI  P DA    +  GMVMC RL+G     + P A  G++ G L  ++LRA      S+R  +  ++LH++PL+C+DI     Q   G                   V NTF+   PG ACVE R D  LF  GGWD R+R++ W  P PLAVL  H+ +V+SIA
Sbjct:   97 VLAPCEEQSRVQLWDLRAQAPQLTIDAPTDAADGSKSAGMVMCCRLLGGG---ARPLAAAGYEDGSLACFELRAAAAASSSTRALVARAKLHDEPLMCLDIAPD-QQLSEGXXXXXXXXXXXXXNSDAIAVRNTFKLPTPGMACVESRGDGTLFACGGWDARVRLYRWARPAPLAVLACHEDTVSSIA 280          
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: A9NVL8_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NVL8_PICSI)

HSP 1 Score: 127 bits (319), Expect = 1.030e-29
Identity = 73/240 (30.42%), Postives = 122/240 (50.83%), Query Frame = 0
Query:   96 VPMHREGHPVKDKHT---IFCTGSFAENVLLAPCESNAVRLWDLRD-------RTPAYTI--TPADAEGKGMVMCARLMGQSPSFSTPY--AICGHDSGHLCFYDLRASSRTALMESRLHEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPGTACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIAHSQRIGGFASGSADSRVAIWNVFP 321
            +  H + H V D  +   + C G     + +A  E + V +WD+         ++P +     P +   K   MC  L    P  S  +   + G++ G L ++DLR + RT +   R H +P+L + +   C  GVSG+A   I  F ++  KG C +       HPG + + IR D K+F + GWDHR+RV+ +   +PLA+L+ H  +VTS++ S+     AS S D+ +A+W+++P
Sbjct:  204 LSAHAKHHSVADTVSSPPLSC-GQGKVFMAIAGEEPSVVDIWDIDSGEQVVHLKSPDFDSHGNPTEFSTKSRGMCMALQAFFPPKSHGFLNVLVGYEDGSLAWWDLR-NPRTPVTSVRFHSEPVLSLALDEECRGGVSGAADEKIVFFSLDYDKGTCLLKKEINHPHPGISDISIRIDSKIFATAGWDHRVRVYDYHKRKPLAILKYHSATVTSVSFSKDCKLIASSSEDATIALWSLYP 441          
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: A0A164YBF3_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A164YBF3_DAUCS)

HSP 1 Score: 124 bits (312), Expect = 4.020e-29
Identity = 78/262 (29.77%), Postives = 131/262 (50.00%), Query Frame = 0
Query:   69 PGASRRRIDHGG---DGDVGEDESPERSSGVPMHREGHPVKDKHTIFCTGSFAENVLLAPCESNAVRLWDLRD-----RTPAYTITPADA-EGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRASSRTALMESRLHEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPGTACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIAHSQRIGGFASGSADSRVAIWNVFP 321
            P +  +++D G    D  VG+  +    SG+      +P  DK          E V +A  ES+ V +WDL       + P  +++   A + +GM M  +    S S      + G++ G + ++DLR + R  L   + H +P+L + +  SCT G+SG+A   I +F ++   G+  V    R + PG A + IR D+K+  + GWDHR+RV+++RN   LA+L+ H     ++  S      AS S D+ VA+W ++P
Sbjct:  122 PSSFAKQVDDGNSKVDEPVGDTSNLGSLSGIQGSSSSNPEDDK-----LNGGHEYVAIAGEESSQVEIWDLNAAVRFAQLPHSSVSSNHASKARGMCMAVQAFVPSQSQGFLTVLAGYEDGTMVWWDLR-NPRVPLTLVKYHSEPVLSLCVDGSCTGGISGAADDKIVIFALDQSMGISVVKKEIRLERPGIAGISIRADKKIAATAGWDHRVRVYNYRNGNALAILKYHHAMCNAVTFSANNRLMASSSEDTSVALWELYP 377          
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: A0A4W6EMS2_LATCA (G protein subunit beta 1 like n=3 Tax=Carangaria TaxID=1489904 RepID=A0A4W6EMS2_LATCA)

HSP 1 Score: 122 bits (305), Expect = 1.540e-28
Identity = 77/223 (34.53%), Postives = 126/223 (56.50%), Query Frame = 0
Query:  112 FCTGSFAE----NVLLAPC--ESNAVRLWDLRDRTPAYTITPADAEGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRASSRTALMESRLHEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPGTACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIAHS------QRIGGFASGSADSRVAIWNVFPE 322
            FC  S  E    N LLA    ++  +R+ +L  ++P  T+ P D +  GMVMC +L  Q  S S P  + G++ G L  +D+  + R+ L +++ H +P++C+   +   +G+SGS+   +  + ++ Q  L  + +     +PG + + IR D KL  S GWDHR+RVFSW+  RPLAVL+ H   V S+A S      QR+   A+GS D R+++W+++ E
Sbjct:  109 FCQCSLLETGPGNNLLAFAGQQTEEIRIIELPSKSPVCTLVP-DTK-LGMVMCIKLW-QPDSGSRPLLLAGYEDGSLLLWDV--TQRSKLSQAKAHPEPVMCLTFDTKRLRGISGSSEKKLSSWILDRQDNL-QLQDCVTLVNPGVSQLCIREDGKLLASAGWDHRVRVFSWKKLRPLAVLQYHTDMVLSVAFSDHQDPKQRL--LAAGSKDQRISLWSIYNE 323          
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: UPI000F54D00F (guanine nucleotide-binding protein subunit beta-like protein 1 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F54D00F)

HSP 1 Score: 121 bits (304), Expect = 2.100e-28
Identity = 65/203 (32.02%), Postives = 112/203 (55.17%), Query Frame = 0
Query:  125 PCESNA-VRLWDLRDRTPAYTITPADAEGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRASSRTALMESRLHEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPGTACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIAHSQRIGG----FASGSADSRVAIWNVFPE 322
            P  SN+ V + DL  +   + + P + +  GM MC  L+   P+   P+ I G++SG L  +D+ A     L  +  H + +LC+D+     + VSGSAG  + V  +  Q  +  V      ++PG A V+IR+D+K+  +GGWD RIR++SW+  +PLA L  H  ++ ++  S+ +       A+G  DSR+++W+++ E
Sbjct:  128 PSASNSQVNIHDLESKEILFALKPDNGKSLGMCMCISLISD-PATDKPFLIAGYESGQLVLWDVMAGK--ILSRNPTHTESVLCMDVDKEDLRIVSGSAGSKLCVSSVTPQHSI-TVEKEIELKNPGIASVKIRKDRKILATGGWDGRIRIYSWKTLKPLAYLSYHTQTINTVDFSEDLCDHGQLLAAGGKDSRISLWSLYNE 326          
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: A0A6S7HDL6_PARCT (Guanine nucleotide-binding subunit beta 1 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HDL6_PARCT)

HSP 1 Score: 121 bits (303), Expect = 2.500e-28
Identity = 69/217 (31.80%), Postives = 125/217 (57.60%), Query Frame = 0
Query:  111 IFCTGSFAENVLLAPCESNA-VRLWDLRDRTPAYTITPADAEGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRASSRTALMESRL--HEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPGTACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIAHSQ-RIGGFASGSADSRVAIWNVFPED 323
            I+   S  +N L    E  + + +  L+ +     +TP  ++  GM MC +    S      Y + G++SG +  +DL++S+    M S+L  H++P++CVDI     +G+SGSA   + VF +  ++ L  V  T + ++ G + V+IR D K+F + GWDH++R+FSW++ +PLA+L  H  SV ++A S  +    A+GS D R+++W+++ ++
Sbjct:  112 IYDFQSSGDNCLAVSSEDQSQIDIMCLKTKKIIRKLTPESSKSFGMCMCLK----SIETEKKYLVAGYESGDIILWDLQSSN----MVSKLCVHKEPVMCVDIDPKSNRGISGSAEEKVTVFKLTAERRL-EVEKTVQIKNCGISEVKIRGDCKIFATAGWDHKLRIFSWKSLKPLAILNYHTQSVDAVAFSNCQEQLLAAGSKDGRISLWSLYKDN 319          
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: UPI000C04584D (guanine nucleotide-binding protein subunit beta-like protein 1 isoform X2 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04584D)

HSP 1 Score: 117 bits (293), Expect = 3.300e-27
Identity = 65/216 (30.09%), Postives = 113/216 (52.31%), Query Frame = 0
Query:  111 IFCTGSFAENVLLAPCESNAVRLWDLRDRTPAYTITPADAEGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRASSRTALMESRLHEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPGTACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIAHSQRIGG----FASGSADSRVAIWNVFPE 322
            I   G  +  + L     + V + DL  +   +++ P + +  GM MC  L+   P+   P  I G++SG L  +D+ A  R  L  +  H + +LC+D+     + VSGSA   + V  +  Q  +         ++PG A V+IR+D ++  +GGWD RIR++SWR  +PLA L  H  ++ ++  S+ + G     A+G  DSR+++W+++ E
Sbjct:   71 IMSRGYKSHWIGLPSASHSQVNILDLESKEILFSLKPDNEKSLGMCMCISLISD-PATDKPLLIAGYESGQLLLWDVMA--RQILGRNPTHAESVLCMDVDKEDLRIVSGSADSKLCVSSVTPQHSI-TADKEIELKNPGIASVKIRKDCQILATGGWDGRIRIYSWRTLKPLAYLNYHTQTINTVDFSEDLFGHGQLLAAGGKDSRISLWSIYNE 282          
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Match: A0A8C9SAH5_SCLFO (G protein subunit beta 1 like n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9SAH5_SCLFO)

HSP 1 Score: 118 bits (295), Expect = 3.870e-27
Identity = 75/221 (33.94%), Postives = 119/221 (53.85%), Query Frame = 0
Query:  112 FCTGSFAEN-----VLLAPCES-NAVRLWDLRDRTPAYTITPADAEGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRASSRTALMESRLHEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPGTACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIAHSQ----RIGGFASGSADSRVAIWNVFPE 322
            FC GS  E      +L  P E    V+L +L    P  ++ P DA+  GM+MC +L  Q      P  + G++ G L  +D+  + R  L     H +PLLC+D      +GVSGSA   +  + ++ Q+ L  + +T    +PG + + +R D+++  S GWDHRIR+FSW+  +PLAVL+ H  +   +  S     R+G  A+GS D R++IW+V+ +
Sbjct:  109 FCQGSVMEMHPQRWLLAYPAEDMEEVKLVELPSGVPVCSLKP-DAK-LGMLMCVKLW-QPDGGCGPMLLAGYEDGSLALWDV--AQRQILSRLTTHPEPLLCLDFDPVGLRGVSGSAERAVSSWVLDGQQNL-QLRDTVELVNPGISQLRLRMDRRILASAGWDHRIRLFSWKKLKPLAVLQYHTDTALCVTFSDHKDSRLGLMAAGSKDQRISIWSVYND 323          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10209.323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCI8_9PHAE3.270e-10250.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT91_ECTSI8.440e-5342.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YXT7_9STRA4.530e-3140.43WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A9NVL8_PICSI1.030e-2930.42Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A164YBF3_DAUCS4.020e-2929.77Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A4W6EMS2_LATCA1.540e-2834.53G protein subunit beta 1 like n=3 Tax=Carangaria T... [more]
UPI000F54D00F2.100e-2832.02guanine nucleotide-binding protein subunit beta-li... [more]
A0A6S7HDL6_PARCT2.500e-2831.80Guanine nucleotide-binding subunit beta 1 n=1 Tax=... [more]
UPI000C04584D3.300e-2730.09guanine nucleotide-binding protein subunit beta-li... [more]
A0A8C9SAH5_SCLFO3.870e-2733.94G protein subunit beta 1 like n=2 Tax=Scleropages ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 279..318
e-value: 9.8E-5
score: 31.7
coord: 237..276
e-value: 1.5
score: 15.9
coord: 191..230
e-value: 10.0
score: 10.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 282..318
e-value: 0.024
score: 15.5
coord: 253..275
e-value: 0.27
score: 12.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 286..319
score: 11.277
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 96..323
e-value: 1.6E-28
score: 101.2
NoneNo IPR availablePANTHERPTHR19854TRANSDUCIN BETA-LIKE 3coord: 7..320
NoneNo IPR availablePANTHERPTHR19854:SF1GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-LIKE PROTEIN 1coord: 7..320
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 244..325
score: 13.949
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 113..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10209contigP-canaliculata_contig10209:4253..7566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10209.323.1mRNA_P-canaliculata_contig10209.323.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10209 3745..10404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10209.323.1 ID=prot_P-canaliculata_contig10209.323.1|Name=mRNA_P-canaliculata_contig10209.323.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=326bp
MLAPAPAPIREVVTGAFHFCQFALTRWRPSTAMSAETTYHSSENLRREDR
RKEIDEDGGGWGIHAGDTPGASRRRIDHGGDGDVGEDESPERSSGVPMHR
EGHPVKDKHTIFCTGSFAENVLLAPCESNAVRLWDLRDRTPAYTITPADA
EGKGMVMCARLMGQSPSFSTPYAICGHDSGHLCFYDLRASSRTALMESRL
HEKPLLCVDIGSSCTQGVSGSAGGNIHVFGINLQKGLCNVVNTFRSQHPG
TACVEIRRDQKLFVSGGWDHRIRVFSWRNPRPLAVLRSHDGSVTSIAHSQ
RIGGFASGSADSRVAIWNVFPEDGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf