Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | SMART | SM00364 | LRR_bac_2 | coord: 50..69
e-value: 90.0
score: 6.4
coord: 73..92
e-value: 24.0
score: 10.8
coord: 4..23
e-value: 28.0
score: 10.2 |
| None | No IPR available | PANTHER | PTHR16083 | LEUCINE RICH REPEAT CONTAINING PROTEIN | coord: 4..110 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 185..333 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..164 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 165..184 |
| None | No IPR available | SUPERFAMILY | 52058 | L domain-like | coord: 2..115 |
| None | No IPR available | TMHMM | TMhelix | | coord: 165..184 |
| IPR003591 | Leucine-rich repeat, typical subtype | SMART | SM00369 | LRR_typ_2 | coord: 73..96
e-value: 4.1
score: 16.4
coord: 4..26
e-value: 1.6
score: 17.8
coord: 27..50
e-value: 6.1
score: 15.0 |
| IPR001611 | Leucine-rich repeat | PFAM | PF13855 | LRR_8 | coord: 29..86
e-value: 5.7E-9
score: 35.6 |
| IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 75..97
score: 7.134 |
| IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 29..50
score: 5.063 |
| IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 52..73
score: 6.557 |
| IPR001611 | Leucine-rich repeat | PROSITE | PS51450 | LRR | coord: 6..27
score: 7.427 |
| IPR032675 | Leucine-rich repeat domain superfamily | GENE3D | 3.80.10.10 | | coord: 1..152
e-value: 6.3E-27
score: 95.9 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-canaliculata_contig101692.261.1 ID=prot_P-canaliculata_contig101692.261.1|Name=mRNA_P-canaliculata_contig101692.261.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=333bp
IGYLKNLKELYLQQNELEKLPKSFSYLTKLQKINLSLNKFQVFPKTIFNF
KLLEYINVSGNKIKVLPKQIGLLKRLTYLNISENRISTIPTRLYVLRKLK
KANFHFNNNLLSDVIIKEIDEKLGKIKSSPKKKKVKEAPSKTLRKASENL
LEDETKSIKGISGLFIFRDLGLIILIPFLLYLFFKYNENMDLKIEEDKIK
KDKEAYALAVQNMKASKERILEKTKEIYVYTNDTASLKLTIAANAYFSDL
EFNKRYTYMFKRKTKYINKFLNNKSYGYKGVIDKCRKKFSQLWLHDSVIP
NGYAKKFRIVRYYRMNAKERAYNIERDKKRAYY back to top
Annotated Terms
The following terms have been associated with this polypeptide:
|