Homology
BLAST of mRNA_P-canaliculata_contig10169.260.1 vs. uniprot
Match:
D8LSH3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH3_ECTSI)
HSP 1 Score: 107 bits (266), Expect = 1.390e-22
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 0
Query: 8 DRAALAVLFRSCHGPRWLRRAGWSAGSDERTGVAWTSDRSRLIKLELGTNRVEGYMPKELGALS 71
DRAALA+LFRSCHG RWLRRAGW SD R GVAWT++ +R++KLELG NR+EGY+PKELG +S
Sbjct: 1023 DRAALAILFRSCHGLRWLRRAGWDGDSDGRHGVAWTAENARVLKLELGNNRLEGYIPKELGVMS 1086
BLAST of mRNA_P-canaliculata_contig10169.260.1 vs. uniprot
Match:
A0A6H5L8P8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P8_9PHAE)
HSP 1 Score: 105 bits (261), Expect = 6.720e-22
Identity = 44/64 (68.75%), Postives = 55/64 (85.94%), Query Frame = 0
Query: 8 DRAALAVLFRSCHGPRWLRRAGWSAGSDERTGVAWTSDRSRLIKLELGTNRVEGYMPKELGALS 71
DRAALA+LF+SCHG RWLRRAGW SD R GVAWT++ +R++KLELG NR+EGY+P+ELG +S
Sbjct: 1553 DRAALAILFQSCHGLRWLRRAGWDGDSDRRHGVAWTTENARVLKLELGNNRLEGYIPRELGVMS 1616
BLAST of mRNA_P-canaliculata_contig10169.260.1 vs. uniprot
Match:
A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)
HSP 1 Score: 57.4 bits (137), Expect = 4.420e-7
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0
Query: 8 DRAALAVLFRSCHGPRWLRRAGWSAGSDERT--GVAWTSDRSRLIKLELGTNRVEGYMPKELGALS 71
DR AL LF S G W RR W+ +D T GV +D+ R++ ++LG+N ++G +PKELGAL+
Sbjct: 5 DRDALVALFCSTGGAGWTRRDNWNTDADRATWFGVK-VNDQGRVVDVDLGSNNLQGPIPKELGALA 69
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10169.260.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
20 40 60 80 100 120 140 160 180 200 220 240 Expect = 1.39e-22 / Id = 71.88 Expect = 6.72e-22 / Id = 68.75 Expect = 4.42e-7 / Id = 43.94 Sequence D8LSH3_ECTSI A0A6H5L8P8_9PHAE A0A6H5KQQ0_9PHAE back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
20 40 60 80 100 120 140 160 180 200 220 240 Expect = 210.0 / Score = 2.4 Expect = 11.0 / Score = 13.0 Expect = 120.0 / Score = 4.4 Expect = 49.0 / Score = 7.6 Expect = 8.9E-24 / Score = 85.7 Expect = 8.2E-36 / Score = 125.2 Score = Score = Score = Score = Score = Sequence SM00369 G3DSA:3.80.10.10 G3DSA:3.80.10.10 PTHR27008 PTHR27008:SF193 PTHR27008:SF193 PTHR27008 SSF52058
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_P-canaliculata_contig10169.260.1 ID=prot_P-canaliculata_contig10169.260.1|Name=mRNA_P-canaliculata_contig10169.260.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=257bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR003591 Leu-rich_rpt_typical-subtyp IPR032675 LRR_dom_sf