prot_P-canaliculata_contig10117.205.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig10117.205.1
Unique Name	prot_P-canaliculata_contig10117.205.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	674

Homology

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BLAST of mRNA_P-canaliculata_contig10117.205.1 vs. uniprot
Match: D7G0T9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T9_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 7.060e-39
Identity = 127/326 (38.96%), Postives = 166/326 (50.92%), Query Frame = 0

Query:    3 EDLTSRHRMCVKPDQSMTIFKLVDRETGEESVEYAKDMVFQRPCDGCQHLKSCIMAGHPLQDWATEGNDNRII--KRKSMSSTPKSPGASSP---SKSXXXXXXXXXXGKTAGVTS---TEIVASPSTATIKGRKVEG-NHRPKRRKTDTGMASSTAVASEPKA-NVGTNTPGKGAGSRSXXXXXXXXXXXPAQGRGGAAGAVSGGG-------------GGTTAETIAVRLQDMTAAEDLLRQQFQTDMQNLDKAETAKLKEIEEANAALERIRLIRKATRDKIDEQRKDMSAERQRLTHLRVKAIIREEEELRRRNEALWTACE 305
            ++L +RHR CVKPDQ+MTIFKLVDR TGEESVEY+ DM+FQRPC  C HLK+CI+ GH L DW  EG   R    KRKS S+  K+    SP    +            KT  VT       +  P  A    RK EG    P+     T  +S     S P+A      +P   A                          VS G               G   ++IA +L  + A EDLL QQF+ DM++LD+A+ ++ KEI  A AALE+I+  R+ T+    EQRK M AER RLTHLR + ++REE E R++ + +W+A E
Sbjct:   41 DELAARHRQCVKPDQTMTIFKLVDRNTGEESVEYSPDMIFQRPCASCIHLKTCILGGHELTDWTPEGGRGRASQNKRKSASTLEKALELLSPPAGEQQQHQHKQQQPSSKTRKVTDGYPKPSITIPGPALKAARKSEGATTAPEELGRSTRWSSKGRKVSAPEAFEEAVPSPAAAAPPEDEFCAAADAVDTDEDVDVNDHACVSNGAVXXXXXXXXXXXXXGAPQQSIASQLDALAAQEDLLLQQFRADMRHLDEAKASREKEIRVAQAALEKIKATRETTKSNTAEQRKRMVAERDRLTHLRCQEMMREEAEHRQKKDDMWSAVE 366

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig10117.205.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig10117.205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1

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x 1

POSITION

0


Match Name	E-value	Identity	Description
D7G0T9_ECTSI	7.060e-39	38.96	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

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x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 243..277

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig10117	contig	P-canaliculata_contig10117:732..9526 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig10117.205.1	mRNA_P-canaliculata_contig10117.205.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig10117 676..10488 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig10117.205.1 ID=prot_P-canaliculata_contig10117.205.1|Name=mRNA_P-canaliculata_contig10117.205.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=674bp
MVEDLTSRHRMCVKPDQSMTIFKLVDRETGEESVEYAKDMVFQRPCDGCQ
HLKSCIMAGHPLQDWATEGNDNRIIKRKSMSSTPKSPGASSPSKSQSQGS
SSSSRGKTAGVTSTEIVASPSTATIKGRKVEGNHRPKRRKTDTGMASSTA
VASEPKANVGTNTPGKGAGSRSGAGSRSAASSRPAQGRGGAAGAVSGGGG
GTTAETIAVRLQDMTAAEDLLRQQFQTDMQNLDKAETAKLKEIEEANAAL
ERIRLIRKATRDKIDEQRKDMSAERQRLTHLRVKAIIREEEELRRRNEAL
WTACEASAGFALGSTPSSAATASARGEHGRPARAGRAGRSPARQVHPTVP
VPAAAAAAPTPNGYSSSSPSSSSVSFAQHGLGVSAAAGGFHVINPWPASG
RAIEGGRGNNGDDGESEGTEEGDINVEGGGTHEERAVRGGGDGLMSGEAD
SASEAGLEEGSRKEVGSGEGSGEGRGGARPSVEQAAETRAVNENGSISGV
DEDEGEIPAEVETAMDEEKEEGEENEAGTTEEMEWTSEPEENGGPSRGTD
GKRDGDEEAEERGGLVGNVGALSEHEEDEVEVRGSVEDAPIDSEAFGVAG
PGRTNNEGGSEAERGTGSESSSGSRDKERPAVRDELDGVDGDVRCEDEEE
ERVDVGGSPVGGGVRGEVEVATR*