Homology
BLAST of mRNA_P-canaliculata_contig100408.104.1 vs. uniprot
Match:
A0A517Y623_9BACT (Uncharacterized protein n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517Y623_9BACT)
HSP 1 Score: 79.7 bits (195), Expect = 2.810e-15
Identity = 55/178 (30.90%), Postives = 98/178 (55.06%), Query Frame = 0
Query: 7 EDATLPFISGIILAVIFFLLFINSRNKIMLYLAIGITLLAGGIFACEQLVVTDREEVAMIVSDLADQVQNNNVQGVVKRLSPKYQETIRRAEAEMPNYHFSMCRLSGVPRFK-DDRTNPNKKIVSFVV----NFRASSKRIKE-KIPGQRKVTLTFERDAAGEWKVTDYSHSDPRENV 178
A L F++ + A++ F+ +I + K +LYL + +L G+ E+ ++DRE + + +A +++ N+ V + PK + +AEAE+P Y FS CR++ + K + +P K V F + +FR+ + + E KIP R + L+ E+D G+WKVTDY H+ P + +
Sbjct: 9 NPALLVFLAAFV-ALVVFVAWIKTGRKEVLYLLGMVIVLDVGLVMYERFTISDREAIQATLLRVARELETNDRAAVYAAIHPKAVDQRMQAEAELPKYTFSECRITKIHETKVEGNQSPKKATVEFNIIASGSFRSGADVLGETKIP--RFIRLSLEQDTDGQWKVTDYYHASPEQAI 183
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100408.104.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M P S W F S E D A T L P F I S G I I L A V I F F L L F I N S R N K I M L Y L A I G I T L L A G G I F A C E Q L V V T D R E E V A M I V S D L A D Q V Q N N N V Q G V V K R L S P K Y Q E T I R R A E A E M P N Y H F S M C R L S G V P R F K D D R T N P N K K I V S F V V N F R A S S K R I K E K I P G Q R K V T L T F E R D A A G E W K V T D Y S H S D P R E N V R L * 20 40 60 80 100 120 140 160 180 Expect = 2.81e-15 / Id = 30.90 Sequence A0A517Y623_9BACT
Match Name E-value Identity Description
A0A517Y623_9BACT 2.810e-15 30.90 Uncharacterized protein n=1 Tax=Anatilimnocola agg... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M P S W F S E D A T L P F I S G I I L A V I F F L L F I N S R N K I M L Y L A I G I T L L A G G I F A C E Q L V V T D R E E V A M I V S D L A D Q V Q N N N V Q G V V K R L S P K Y Q E T I R R A E A E M P N Y H F S M C R L S G V P R F K D D R T N P N K K I V S F V V N F R A S S K R I K E K I P G Q R K V T L T F E R D A A G E W K V T D Y S H S D P R E N V R L * 20 40 60 80 100 120 140 160 180 Score = Score = Score = Score = Score = Score = Score = Sequence CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 29..34 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 58..180 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 12..28 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 35..57 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..11 None No IPR available TMHMM TMhelix coord: 10..28 None No IPR available TMHMM TMhelix coord: 35..57
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_P-canaliculata_contig100408.104.1 ID=prot_P-canaliculata_contig100408.104.1|Name=mRNA_P-canaliculata_contig100408.104.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=181bp back to top