Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Model size | 266 |
| Cds size | 243 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817356.3174691-CDS-P-canaliculata_contig9971:10822..10941 | 1622817356.3174691-CDS-P-canaliculata_contig9971:10822..10941 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9971 10823..10941 - |
| 1693495244.1545913-CDS-P-canaliculata_contig9971:10822..10941 | 1693495244.1545913-CDS-P-canaliculata_contig9971:10822..10941 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9971 10823..10941 - |
| 1622817356.328751-CDS-P-canaliculata_contig9971:11685..11809 | 1622817356.328751-CDS-P-canaliculata_contig9971:11685..11809 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9971 11686..11809 - |
| 1693495244.168738-CDS-P-canaliculata_contig9971:11685..11809 | 1693495244.168738-CDS-P-canaliculata_contig9971:11685..11809 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9971 11686..11809 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817356.339944-UTR-P-canaliculata_contig9971:11809..11832 | 1622817356.339944-UTR-P-canaliculata_contig9971:11809..11832 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig9971 11810..11832 - |
| 1693495244.1796343-UTR-P-canaliculata_contig9971:11809..11832 | 1693495244.1796343-UTR-P-canaliculata_contig9971:11809..11832 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig9971 11810..11832 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9971.24087.1 >prot_P-canaliculata_contig9971.24087.1 ID=prot_P-canaliculata_contig9971.24087.1|Name=mRNA_P-canaliculata_contig9971.24087.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=81bp
MMAHYSAAAVAVLFVTTSELVSQSLASKKGDTAQRLLATLSGRDLPDQVL
GFSGITTSDAADAFPPRFERNIIKALEADDQ back to topmRNA from alignment at P-canaliculata_contig9971:10823..11832- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig9971.24087.1 ID=mRNA_P-canaliculata_contig9971.24087.1|Name=mRNA_P-canaliculata_contig9971.24087.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1010bp|location=Sequence derived from alignment at P-canaliculata_contig9971:10823..11832- (Pelvetia canaliculata dioecious)
AGTCCGAGGGAAAAAGAGGAAGCATGATGGCCCACTACTCTGCTGCTGCT
GTGGCTGTACTTTTTGTGACTACCTCGGAGCTGGTCAGCCAATCGCTCGC
GTCGAAAAAGGGTGACACGGCCCAACGCTTGCTAGCCACTTTATCAGGTA
TGAATAAATGGCTCTACCGAATCCTGGCCTCGTCGCTCAAAAAAAACTGA
GCGGGTGATAATCTGACGGTTCGTGGAGTATGAGAGCTTCATGGTTTGGA
GGGGAGGGATCAATACTACAATAAAGAGTGTTTGGCATCTGTTTCAATAA
CTGTTCAGCCTTAAAATGTCTCTTCCAGACTTGAGTATGCGTGGCGTGCA
TAGCACAAAGTCTGATGGTTCTTATGAAGCATGGCTTGGTATCCGTATGT
TATCATGAACGGGATCAAGAGGAAATACGCCTCCCATGTTTGTGTTAGTC
GGAAATAAGTAGATACGCGCTCCATCTCAAGGCCCAATGAGTCGTTCAAC
GAATAGGGGGGGGGGGATATTGGAATCGTTTGCCCGTCTTGGGAGAGGGG
GGCACGAAAATATCCCCTCACAGCGACATGTTTTACAACCCTCTTGTGAA
ATAAGTTCGATTCGGACCAAGCTTGCCGACCATGTCGAGAATCATGTAGT
CCTGTCCCCTCGAGGGGCTGTTCTGGTGGCATCCTCGGGGAGGGAATCGT
CGAATCCCCGCCTCCTCCCAATCATTGAACGACATCATGGTTCAGTACGT
CGACATTTCCTACGCCTGGTGCCTTCGCCCATTACATCTCCAATGAAGGC
AGTACATTCTCGATATTTTGTCAATAGCTTTCTATAAAAAACCGCCCCTT
GTATCTTTTGTTGTCTTGTGGTTTGTTCATATCACGAGAAGGTCGCGACC
TACCAGACCAAGTTCTTGGGTTCTCGGGCATCACCACGAGCGACGCCGCG
GACGCGTTCCCACCTAGGTTTGAAAGGAATATCATCAAAGCTTTGGAGGC
GGACGATCAA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig9971:10823..11832- >mRNA_P-canaliculata_contig9971.24087.1 ID=mRNA_P-canaliculata_contig9971.24087.1|Name=mRNA_P-canaliculata_contig9971.24087.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at P-canaliculata_contig9971:10823..11832- (Pelvetia canaliculata dioecious)
ATGATGGCCCACTACTCTGCTGCTGCTGTGGCTGTACTTTTTGTGACTAC
CTCGGAGCTGGTCAGCCAATCGCTCGCGTCGAAAAAGGGTGACACGGCCC
AACGCTTGCTAGCCACTTTATCAGATGATGGCCCACTACTCTGCTGCTGC
TGTGGCTGTACTTTTTGTGACTACCTCGGAGCTGGTCAGCCAATCGCTCG
CGTCGAAAAAGGGTGACACGGCCCAACGCTTGCTAGCCACTTTATCAGGT
CGCGACCTACCAGACCAAGTTCTTGGGTTCTCGGGCATCACCACGAGCGA
CGCCGCGGACGCGTTCCCACCTAGGTTTGAAAGGAATATCATCAAAGCTT
TGGAGGCGGACGATCAAGTCGCGACCTACCAGACCAAGTTCTTGGGTTCT
CGGGCATCACCACGAGCGACGCCGCGGACGCGTTCCCACCTAGGTTTGAA
AGGAATATCATCAAAGCTTTGGAGGCGGACGATCAA back to top
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