mRNA_P-canaliculata_contig9966.24081.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: D7FLP7_ECTSI (Enoyl-CoA hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP7_ECTSI) HSP 1 Score: 346 bits (887), Expect = 3.140e-115 Identity = 183/259 (70.66%), Postives = 214/259 (82.63%), Query Frame = 1 Query: 265 LQIGRLEGNFKGVISVAINNPKANALGFHLINELEDAVKDLADDESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVVDAGRAKSEAMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
L RL+G+ KGV+ + + NPKANALG LI+ELEDAV+ ++ D SVR+VVL+S VPGVFCAGADLKERA M+ E E FV RLR+LM KVA IP PTIA EGAAFGGGLELMLACD+RV G KATMGLTETSLGIIPGAGGTQRLPRLIGA KAKELIFTAR++ A ALELG+V+ V DAG+A+ A++MA ++ARR PLA+RAAK+AIDEGL D EQGMAIER +YARVL T+DR+EGL AF+ERR PEF G+
Sbjct: 2 LGFDRLDGDLKGVVRLEMKNPKANALGLKLISELEDAVEAVSRDGSVRSVVLSSGVPGVFCAGADLKERAVMTKPEAELFVVRLRSLMSKVASIPAPTIAVAEGAAFGGGLELMLACDVRVVGAKATMGLTETSLGIIPGAGGTQRLPRLIGASKAKELIFTARRVDAVRALELGMVNAVFDAGQAEKGALAMAGDMARRGPLAVRAAKLAIDEGLAMEDVEQGMAIERRLYARVLGTKDRDEGLAAFQERRPPEFTGE 260
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: A0A286Y2D3_CAVPO (Enoyl-CoA hydratase domain containing 2 n=7 Tax=Hystricomorpha TaxID=33550 RepID=A0A286Y2D3_CAVPO) HSP 1 Score: 257 bits (657), Expect = 4.870e-80 Identity = 146/278 (52.52%), Postives = 190/278 (68.35%), Query Frame = 1 Query: 223 ARGLASASHVRMRTLQIGRLEGNFKGVISVAINNPKA-NALGFHLINELEDAVKDLADDESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVVDAGR----AKSEAMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
ARG AS R +Q+ LEG +G+ + +N P A NALG+ ++EL++AV L +D+ VR ++L SAV GVFCAGADLKER MS+ E FV RLR LM ++A P PTIAA++G A GGGLEL LACDLRVA A MGL ET+ G++PGAGGTQRLPR +G AKELIFT R+LT +A LG+V+ V+ A A ++A+EI +AP+A+R K+AID G+ + D GMAIE YA+ + TRDR EG+ AF+E+R P+FVGK
Sbjct: 16 ARGSASDGTAGGREIQVRTLEGPDQGITEILMNRPGARNALGYVFVSELQNAVAQLREDQRVRVLLLRSAVKGVFCAGADLKEREQMSATEVGVFVQRLRGLMSEIAAFPAPTIAAMDGFALGGGLELALACDLRVAASTAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLTGVQAHTLGLVNHTVEQNEEGDAAYQRARALAQEILPQAPIAVRLGKVAIDRGM-EVDIASGMAIEEMCYAQNIPTRDRLEGMAAFREKRPPKFVGK 292
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: UPI001FADA3A0 (enoyl-CoA hydratase-related protein n=5 Tax=unclassified Geothrix TaxID=2647902 RepID=UPI001FADA3A0) HSP 1 Score: 256 bits (653), Expect = 7.150e-80 Identity = 143/260 (55.00%), Postives = 186/260 (71.54%), Query Frame = 1 Query: 265 LQIGRLEGNFKGVISVAINNPKA-NALGFHLINELEDAVKDLADDESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVVDAGRAKSEAMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
+++ RL G G++ + ++ P+A NALG L+ E A+ DL D +VR VV+ S VPGVFCAGADLKERA M+ ET FV LR+ ++ +PVP IA +EGAAFGGGLEL LA DLRVAG A +GL ET+L IIPGAGGTQRLPRLIGA +AKELIFTAR++ AEEA LGIV VV AG A A+++A EI P+A+R AK+A+ GL D + G+A E++ YA+V+ T+DR EGL AF+E+R P++ G+
Sbjct: 3 IRVERLGGADAGLVLLGLDRPEAKNALGRQLMAEFRQALADLRFDPAVRVVVMHSLVPGVFCAGADLKERAGMAPAETAAFVHGLRSAFTELEDLPVPVIAVLEGAAFGGGLELALAADLRVAGTDAKLGLVETALAIIPGAGGTQRLPRLIGASRAKELIFTARRIGAEEAGRLGIVDRVVPAGGALDAALALAREILPNGPVALRMAKLAVSRGLEM-DRDSGLAFEQACYAQVIPTKDRLEGLAAFREKRKPQYRGE 261
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: UPI00040C1ED4 (enoyl-CoA hydratase-related protein n=1 Tax=Geothrix fermentans TaxID=44676 RepID=UPI00040C1ED4) HSP 1 Score: 255 bits (651), Expect = 1.430e-79 Identity = 140/260 (53.85%), Postives = 182/260 (70.00%), Query Frame = 1 Query: 265 LQIGRLEGNFKGVISVAINNPKA-NALGFHLINELEDAVKDLADDESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVVDAGRAKSEAMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
+++ RL G G++ + ++ P A NALG L+ E A+ DL D + R +V+ S VPGVFCAGADLKERA MS E FV LR ++ +P+P +AA+EGAAFGGGLEL LA DLR+AG +A MGL ETSL IIPGAGGTQRLPRLIGA +AKELIFTAR+L A EA LG+V V AG A A+++A EI P+A+R AK+A++ GL D G+A ER+ YA+V+ T+DR EGL AF+E+R P++ G+
Sbjct: 3 IRLERLAGEDGGIVLLGLDRPAAKNALGRQLMTEFRQALADLRSDPAARVLVVHSLVPGVFCAGADLKERAGMSQAEAATFVQGLRDAFTELEDLPMPVLAALEGAAFGGGLELALAADLRIAGAEARMGLVETSLAIIPGAGGTQRLPRLIGAARAKELIFTARRLDAAEAERLGLVDRVAPAGGALDAALALAREILPNGPVALRMAKLAVNRGLEM-DRNSGLAFERACYAQVIPTKDRLEGLAAFREKRKPQYRGE 261
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: A0A3D6EH44_9BACT (Enoyl-CoA hydratase n=1 Tax=Holophagaceae bacterium TaxID=2052165 RepID=A0A3D6EH44_9BACT) HSP 1 Score: 254 bits (649), Expect = 2.860e-79 Identity = 144/260 (55.38%), Postives = 181/260 (69.62%), Query Frame = 1 Query: 265 LQIGRLEGNFKGVISVAINNPKA-NALGFHLINELEDAVKDLADDESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVVDAGRAKSEAMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
+++ RL G G+ + ++ P A NALG L+ E A+ DL D SVR VVL S VPGVFCAGADLKERA MS E E FV LR+ ++ +P+P IA +EGAAFGGGLEL LA DLRVAG A MGL ET+L IIPGAGGTQRLPRLIGA +AKELIFTAR++ A EA LG+V V AG A A+++A EI P+A+R AK A+ GL D + G+A E++ YA+VL T+DR EGL AF+E+R P++ G+
Sbjct: 3 IRLERLAGPDTGIFLLGLDRPAAKNALGRQLMGEFRQALADLRVDPSVRVVVLHSLVPGVFCAGADLKERAEMSQAEAEAFVQGLRSAFTELEDLPMPVIAVLEGAAFGGGLELALAADLRVAGTGAKMGLVETALAIIPGAGGTQRLPRLIGASRAKELIFTARRIDAVEAERLGLVDRVAPAGGALDAALALAREILPNGPVALRMAKQAVSRGLDM-DRDAGLAFEQACYAQVLPTKDRLEGLAAFREKRKPQYRGE 261
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: A0A1I7HB90_9BACL (Enoyl-CoA hydratase/carnithine racemase n=2 Tax=Alicyclobacillus macrosporangiidus TaxID=392015 RepID=A0A1I7HB90_9BACL) HSP 1 Score: 253 bits (645), Expect = 1.110e-78 Identity = 133/249 (53.41%), Postives = 179/249 (71.89%), Query Frame = 1 Query: 298 GVISVAINNPKA-NALGFHLINELEDAVKDLADDESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVVDAGRAKSEAMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
GV+++ +N P+A NAL L+ L+ A+ DL D VRAV+LT A FCAGADLKER M + + V +R ++++VA +P+P IAA+EG+AFGGGLEL +ACDLRVA + +GLTETSL I+PGAGGTQRLPRL+G KAKELIFTAR++ EEAL +G+V+ VV G A++ A ++AEEIA+ P+A+R AK A+D G+ D G+A+ER+ Y RV+ T DR EGL AF E+R P + G+
Sbjct: 13 GVVTLTLNRPEAANALSAALVAALQAALNDLRHDPDVRAVILTGAGNKAFCAGADLKERRGMDEGQVRRTVDGIRAVVEQVAALPMPVIAALEGSAFGGGLELAMACDLRVAARGVRLGLTETSLAILPGAGGTQRLPRLVGVAKAKELIFTARRIPVEEALAIGLVNQVVPEGEARAAARALAEEIAQNGPVAVRQAKWAVDHGV-NADLATGLALERAAYERVIPTEDRREGLAAFAEKRKPRYQGR 260
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: A0A8C3K788_9CHAR (Enoyl-CoA hydratase domain containing 2 n=2 Tax=Neognathae TaxID=8825 RepID=A0A8C3K788_9CHAR) HSP 1 Score: 252 bits (643), Expect = 6.180e-78 Identity = 141/280 (50.36%), Postives = 185/280 (66.07%), Query Frame = 1 Query: 217 WAARGLASASHVRMRTLQIGRLEGNFKGVISVAINNPKA-NALGFHLINELEDAVKDLADDESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVV----DAGRAKSEAMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
W G A R + +G G G+ + +N P A N+LG +NEL A++ L DE VR VV S V GVFCAGADLKERA M + E E FV RLR+LMD++A +PVPTIAA++G A GGGLEL LACDLRVA A MGL ET+ G++PGAGGTQRLPR +G AKELIFT R++ ++A +G+V+ V D A A+++A+EI +AP A+R K+AI+ G+ + D GMAIE YA+ + TRDR EG+ AF+E+R P+F+GK
Sbjct: 14 WGGGGPPGAVPRRGAEVLVGTAGGESGGIAEILLNRPHARNSLGKVFVNELFSALEQLRFDEKVRVVVFKSEVKGVFCAGADLKERAKMDNAEVEHFVKRLRSLMDEIASLPVPTIAAIDGFALGGGLELALACDLRVAASSAKMGLIETTRGLLPGAGGTQRLPRCVGIGLAKELIFTGRQIDGQQAFSMGLVNHAVPQNSDGDAAYQRALALAKEILPQAPFAVRMGKLAINRGM-EVDIASGMAIEGMCYAQNIPTRDRQEGMAAFREKRPPQFIGK 292
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: A0A3Q1G057_9TELE (Enoyl-CoA hydratase domain containing 2 n=3 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1G057_9TELE) HSP 1 Score: 253 bits (646), Expect = 6.760e-78 Identity = 136/264 (51.52%), Postives = 190/264 (71.97%), Query Frame = 1 Query: 265 LQIGRLEGNFKGVISVAINNPKA-NALGFHLINELEDAVKDLADDESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVVDAGR----AKSEAMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
+ + RLEG G++ V + KA NALG ++++ + V L++D +VR VV S VPGVFCAGADLKERA M++ E++ FV LR+LM ++A +P PTIAA++GAA GGGLEL LACDLR A + A MGL ET+ G++PGAGG+QRLPR++G AKELIFT +++ + ALE+G+V+ VD + A EA+S+A EI +AP+A+R AK A+++G+ + D MAIER YARV+ TRDR EG+ AF E+RAP++ G+
Sbjct: 66 VDLKRLEGKDDGIVEVLMCRHKARNALGHVFVSQMRELVSTLSNDSAVRVVVFRSLVPGVFCAGADLKERALMNNSESDLFVHGLRSLMTQIASLPTPTIAAMDGAALGGGLELALACDLRTAARSAQMGLIETTRGLLPGAGGSQRLPRMVGLALAKELIFTGKRVGGQTALEIGLVNRAVDQNQTGDAAYREALSLAREILPQAPIAVRMAKEAMNKGV-EVDISSAMAIERMCYARVIPTRDRQEGMAAFIEKRAPQYTGE 328
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: ECHD2_MOUSE (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial n=15 Tax=Muroidea TaxID=337687 RepID=ECHD2_MOUSE) HSP 1 Score: 252 bits (643), Expect = 7.010e-78 Identity = 142/274 (51.82%), Postives = 188/274 (68.61%), Query Frame = 1 Query: 241 ASHVRMRT--LQIGRLEGNFKGVISVAINNPKA-NALGFHLINELEDAVKDLADDESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVV----DAGRAKSEAMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
ASH RT +Q+ L G +G+ + +N P A NALG ++EL +A+ L +D+ VR ++ SAV GVFCAGADLKER MS E FV RLR LM ++A PVPTIAA++G A GGGLEL LACDLR+A A MGL ET+ G++PGAGGTQRLPR +G AKELIFT R+L +A ELG+V+ V + A A+++A+EI +AP+A+R K+AID G+ + D GMAIE+ YA+ + T+DR EG+ AF+E+RAP+FVGK
Sbjct: 24 ASHATTRTPEIQVQALTGPNQGITEILMNRPNARNALGNVFVSELLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKEREQMSDVEVGTFVQRLRGLMSEIAAFPVPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGAQARELGLVNHAVAQNEEGNAAYHRALALAQEILPQAPIAVRLGKVAIDRGM-EVDIASGMAIEQMCYAQNIPTQDRLEGMAAFREKRAPKFVGK 296
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Match: A0A8K0AHX4_ANDGO (Mitochondrial branched-chain amino acid degradation methylglutaconyl-CoA hydratase n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0AHX4_ANDGO) HSP 1 Score: 252 bits (643), Expect = 8.740e-78 Identity = 142/258 (55.04%), Postives = 182/258 (70.54%), Query Frame = 1 Query: 298 GVISVAINNPKA-NALGFHLINELEDAVKDLADD--ESVRAVVLTSAVPGVFCAGADLKERATMSSDETEQFVTRLRTLMDKVAGIPVPTIAAVEGAAFGGGLELMLACDLRVAGKKATMGLTETSLGIIPGAGGTQRLPRLIGACKAKELIFTARKLTAEEALELGIVSTVVDAGRAKSE-------AMSMAEEIARRAPLAIRAAKMAIDEGLRQGDTEQGMAIERSMYARVLKTRDRNEGLQAFKERRAPEFVGK 1041
G+ V +N P+A NALG L+++L + + L +VRAVVL+S +PGVFCAGADLKERATMS E FV LR L ++ +PVPTIA +EGAA GGGLE+ LACD+R+ A++GL ETSL IIPGAGGTQRLPRLIGA KAKEL+FTAR++T E+ LGI + VV A A + A+ +A +IA+ P+A+RAAK A+D GL QGD G IE+ YA+V+ TRDR EGLQAF+E+R P +VG+
Sbjct: 47 GLAHVILNRPEAKNALGRTLVSQLREILAGLRSQPASAVRAVVLSSKIPGVFCAGADLKERATMSPPEVSAFVDSLRALFAEMERLPVPTIACIEGAALGGGLEMALACDMRIVASNASLGLPETSLAIIPGAGGTQRLPRLIGASKAKELMFTARRITGNESFLLGIANHVVSADVADKDKSPVVEKAVEIAVQIAQNGPIAVRAAKQAVDVGL-QGDIHSGFEIEKLCYAQVIPTRDRLEGLQAFREKRKPAYVGQ 303 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9966.24081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9966.24081.1 >prot_P-canaliculata_contig9966.24081.1 ID=prot_P-canaliculata_contig9966.24081.1|Name=mRNA_P-canaliculata_contig9966.24081.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=298bp MYHRPLAALRTAKYASSRRSKQWAARGLASASHVRMRTLQIGRLEGNFKGback to top mRNA from alignment at P-canaliculata_contig9966:1154..11777+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9966.24081.1 ID=mRNA_P-canaliculata_contig9966.24081.1|Name=mRNA_P-canaliculata_contig9966.24081.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=10624bp|location=Sequence derived from alignment at P-canaliculata_contig9966:1154..11777+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9966:1154..11777+ >mRNA_P-canaliculata_contig9966.24081.1 ID=mRNA_P-canaliculata_contig9966.24081.1|Name=mRNA_P-canaliculata_contig9966.24081.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1788bp|location=Sequence derived from alignment at P-canaliculata_contig9966:1154..11777+ (Pelvetia canaliculata dioecious)back to top |