Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 549 |
| Cds size | 549 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817355.5090988-CDS-P-canaliculata_contig99600:322..871 | 1622817355.5090988-CDS-P-canaliculata_contig99600:322..871 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99600 323..871 + |
| 1693495243.5811093-CDS-P-canaliculata_contig99600:322..871 | 1693495243.5811093-CDS-P-canaliculata_contig99600:322..871 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99600 323..871 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99600.24075.1 >prot_P-canaliculata_contig99600.24075.1 ID=prot_P-canaliculata_contig99600.24075.1|Name=mRNA_P-canaliculata_contig99600.24075.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=183bp
MRGIEHAVMLAAVSILLSGGTAHAKDLSGRIGVGALQTVGGVSGISARFQ
ATPKIGVQTVVNLGVASPDGEDFGYGVGLGLRGLYSIIDAGDFNGSVGLG
VDFAYQNFGGSLMQFGFHVPVRMEYFFTNWFALNLEMGLRFNIVGDDGQL
LNAPGNGLLAGKGFGVDLNHTLFGGGGFSFYF* back to topmRNA from alignment at P-canaliculata_contig99600:323..871+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig99600.24075.1 ID=mRNA_P-canaliculata_contig99600.24075.1|Name=mRNA_P-canaliculata_contig99600.24075.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=549bp|location=Sequence derived from alignment at P-canaliculata_contig99600:323..871+ (Pelvetia canaliculata dioecious)
ATGCGAGGAATAGAACACGCTGTCATGCTAGCGGCGGTGAGCATTTTGCT
TTCGGGCGGAACGGCTCATGCCAAGGACCTGAGTGGACGCATTGGCGTCG
GAGCTCTACAAACCGTTGGAGGCGTATCTGGTATCTCAGCACGTTTTCAA
GCGACACCGAAAATCGGTGTGCAAACCGTCGTGAATCTAGGAGTTGCCAG
TCCTGATGGAGAAGACTTCGGCTACGGTGTCGGCCTTGGTCTACGCGGCC
TCTACTCCATAATTGACGCTGGAGACTTTAACGGCAGTGTTGGCCTCGGT
GTTGATTTTGCCTACCAAAACTTTGGCGGAAGCCTAATGCAGTTCGGTTT
TCACGTCCCAGTGCGGATGGAGTACTTCTTCACAAACTGGTTTGCTTTGA
ATCTCGAAATGGGTCTTCGTTTTAATATCGTGGGCGATGACGGGCAGTTA
CTAAATGCACCTGGCAATGGCCTGTTGGCCGGCAAGGGCTTTGGCGTAGA
CCTTAACCACACACTCTTTGGTGGTGGCGGATTTTCTTTCTACTTCTAG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig99600:323..871+ >mRNA_P-canaliculata_contig99600.24075.1 ID=mRNA_P-canaliculata_contig99600.24075.1|Name=mRNA_P-canaliculata_contig99600.24075.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at P-canaliculata_contig99600:323..871+ (Pelvetia canaliculata dioecious)
ATGCGAGGAATAGAACACGCTGTCATGCTAGCGGCGGTGAGCATTTTGCT
TTCGGGCGGAACGGCTCATGCCAAGGACCTGAGTGGACGCATTGGCGTCG
GAGCTCTACAAACCGTTGGAGGCGTATCTGGTATCTCAGCACGTTTTCAA
GCGACACCGAAAATCGGTGTGCAAACCGTCGTGAATCTAGGAGTTGCCAG
TCCTGATGGAGAAGACTTCGGCTACGGTGTCGGCCTTGGTCTACGCGGCC
TCTACTCCATAATTGACGCTGGAGACTTTAACGGCAGTGTTGGCCTCGGT
GTTGATTTTGCCTACCAAAACTTTGGCGGAAGCCTAATGCAGTTCGGTTT
TCACGTCCCAGTGCGGATGGAGTACTTCTTCACAAACTGGTTTGCTTTGA
ATCTCGAAATGGGTCTTCGTTTTAATATCGTGGGCGATGACGGGCAGTTA
CTAAATGCACCTGGCAATGGCCTGTTGGCCGGCAAGGGCTTTGGCGTAGA
CCTTAACCACACACTCTTTGGTGGTGGCGGATTTTCTTTCTACTTCTAGA
TGCGAGGAATAGAACACGCTGTCATGCTAGCGGCGGTGAGCATTTTGCTT
TCGGGCGGAACGGCTCATGCCAAGGACCTGAGTGGACGCATTGGCGTCGG
AGCTCTACAAACCGTTGGAGGCGTATCTGGTATCTCAGCACGTTTTCAAG
CGACACCGAAAATCGGTGTGCAAACCGTCGTGAATCTAGGAGTTGCCAGT
CCTGATGGAGAAGACTTCGGCTACGGTGTCGGCCTTGGTCTACGCGGCCT
CTACTCCATAATTGACGCTGGAGACTTTAACGGCAGTGTTGGCCTCGGTG
TTGATTTTGCCTACCAAAACTTTGGCGGAAGCCTAATGCAGTTCGGTTTT
CACGTCCCAGTGCGGATGGAGTACTTCTTCACAAACTGGTTTGCTTTGAA
TCTCGAAATGGGTCTTCGTTTTAATATCGTGGGCGATGACGGGCAGTTAC
TAAATGCACCTGGCAATGGCCTGTTGGCCGGCAAGGGCTTTGGCGTAGAC
CTTAACCACACACTCTTTGGTGGTGGCGGATTTTCTTTCTACTTCTAG back to top
|