Homology
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
D7FTA5_ECTSI (Myb_Cef domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA5_ECTSI)
HSP 1 Score: 359 bits (922), Expect = 2.080e-121
Identity = 217/313 (69.33%), Postives = 239/313 (76.36%), Query Frame = 1
Query: 1 FLQDLEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIRRRTELNLPAPQVSDSELEELARMSGQAQAHGGGRSTSTLLGDYSEAMPTPTPLRTPSTPAGEDVVMQARFFLTIIPRNLAALTSGQTPLLGGESPHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXXS---------TPVPGTPSTLGLNDETSLASMSPVGSVSSFGGSXXXXXXXXXXXXXXXXXRKAELRAKLEELPLPQNEYELVAPELLDEADGAPLREEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRPG 912
FLQDLEDKRRDEEDER RKKD+ KIK+MMK NLPQQILA++A NDP+PIRRRTEL+LPAPQVSD ELEEL +M QAQAH G STS LLGDYSEAMPTPTP+RTP+TP GEDVVMQ RNLA L+SGQTPLLGGESPHL+EGTGFGG+APR XXXXXXX TPVPGTPSTLGLND+ S+ASMSP+GSVSSFGG +K ELRAKL LP PQ EYELVAP++++EADGAPLREEDAA+RDARL AEQAA EE EFR+RSQ VRRDLPRPG
Sbjct: 11 FLQDLEDKRRDEEDERSRKKDEAKIKKMMKANLPQQILAINATNDPIPIRRRTELSLPAPQVSDGELEELVKMGAQAQAHAAGGSTSALLGDYSEAMPTPTPMRTPATPVGEDVVMQEA-------RNLAVLSSGQTPLLGGESPHLQEGTGFGGSAPRQNRMTTPSAMGAGXXXXXXXXXXXXXXXXXTPVPGTPSTLGLNDDASMASMSPMGSVSSFGGGPVGSKEERARERR----KKEELRAKLSGLPAPQYEYELVAPDVMEEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRPG 312
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
A0A6H5L1Z3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z3_9PHAE)
HSP 1 Score: 282 bits (722), Expect = 9.660e-85
Identity = 193/340 (56.76%), Postives = 215/340 (63.24%), Query Frame = 1
Query: 1 FLQDLEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIRRR-----TELNLPAPQVSDSELEELARMSGQAQAHGGGRSTSTLLGDYSEAMPTPTPLRTPSTPAGEDVVMQARFFLTIIPRNLAALTSGQTPLLGGESPHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXX--------STPVPGTPST-----------------------LGLNDETSLASMSPVGSVSSFGGSXXXXXXXXXXXXXXXXXRKAELRAKLEELPLPQNEYELVAPELLDEADGAPLREEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRPG 912
FLQDLEDKRRDEEDER RKKD+ KIK+MMK NLPQQILA++A NDP+PIRRR TEL+LPAPQVSD ELEEL +M QAQAH R + +EAM +FF+ RNLA LT GQTPLLGGESPHL+EGTGFGG+APR XXXXX STPVPGTPST LGLND+ S+ASMSP+GSVSSFGG RK ELRAKL LP PQ EYELVAP++++EADGAPLREEDAA+RDARL AEQAA EE EFR+RSQ VRRDLPRPG
Sbjct: 253 FLQDLEDKRRDEEDERSRKKDEAKIKKMMKANLPQQILAINATNDPIPIRRRYRGEWTELSLPAPQVSDGELEELVKMGAQAQAHVRERMEDKVTKISAEAM---------------------QFFVGCEARNLALLTIGQTPLLGGESPHLQEGTGFGGSAPRQNRMTTPSTMGARGGXXXXXXXXXXVGSSTPVPGTPSTVXXXXXXXXXXXXXXXXXXMRDELGLNDDASMASMSPMGSVSSFGGGPAGSKEEKARERR----RKEELRAKLSGLPAPQYEYELVAPDVMEEADGAPLREEDAADRDARLLAEQAAREEAEFRKRSQAVRRDLPRPG 567
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
A0A835YNI3_9STRA (Cell division cycle 5-like protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI3_9STRA)
HSP 1 Score: 178 bits (452), Expect = 8.130e-47
Identity = 135/327 (41.28%), Postives = 181/327 (55.35%), Query Frame = 1
Query: 1 FLQDLEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIRRRTELNLPAPQVSDSELEELARMSGQAQAHGGGRSTST--LLGDYSEAMPTPTPLRTPSTPAGEDVVMQARFFLTIIPRNLAALTSGQTPLLGGESPHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXX--STPVPG----------------TP--STLGLNDETSLASMSPVGSVSSFGGSXXXXXXXXXXXXXXXXXRKAELRAKLEELPLPQNEYELVAPELLDEADG-APLREEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRPG 912
++ +E+KRRD+E+E ERKKD K+K+MMK NLPQQI+AVS NDP+ +R+R L+LPAPQVSD+ELE++ ++ S +T L+G+Y + P TPLRTP+TPAG DV+MQ RN+A L + QTPLLGGE+ LE GTGF G+ PR +TP+ G TP LGLN E S +P GS SS AEL A+L+ LP PQ YE+ P++ D+ + A EEDAA+RD R+ A + A +E E+R R+Q ++RDLPRP
Sbjct: 247 YMHKMEEKRRDKEEETERKKDAAKLKKMMKANLPQQIMAVSKLNDPIAVRKRAPLSLPAPQVSDAELEDIVKLGAAXXXXXXXXSEATAGLIGEYRQDRPGATPLRTPATPAGADVIMQEA-------RNMALLNAAQTPLLGGENAALEAGTGFEGSTPRSQRAPATPNALMTPGGGGSEGGATPMRGGVTGKRXXXXXXXXXRTPMRDQLGLNREDDFMS-TPGGSTSS------------RMERERARRAAAELAAQLQGLPAPQYSYEISLPDVKDDDEKTAQQLEEDAADRDRRIEAARIAQQEAEWRARTQVLKRDLPRPA 553
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
A0A7S2SCC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCC5_9STRA)
HSP 1 Score: 140 bits (353), Expect = 1.250e-33
Identity = 106/282 (37.59%), Postives = 148/282 (52.48%), Query Frame = 1
Query: 85 MKQNLPQQILA-VSAANDPLPIRRRTELNLPAPQVSDSELEELARMSG----QAQAHGGGRSTSTLLGDYSEAMPTPTPLRTPSTPAGEDVVMQARFFLTIIPRNLAALTSGQTPLLGGESPHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXXS-TPVPGTPSTLGLNDETSLASMSPVGSVSSFGGSXXXXXXXXXXXXXXXXXRKAELRAKLEELPLPQNEYELVAPELL-DEADGAPLREEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRP 909
M++ P QI+A +S ANDPL RRRTEL+LPAPQV+D ELE++ ++ +A G +T L+GDY++ PTP+RTP T AG DV++Q RN A+ + +TPLLGG++P+LE GTGF G P+ + TP T S L DE + + G + ++A+L+ L LP PQ +YE+ P++ DEA+ EEDAA+R + A EE EF+RRS VRR+LPRP
Sbjct: 278 MEEANPAQIMAQISKANDPLSYRRRTELDLPAPQVTDQELEQVLKVGALALPEAAGGAGDPATQALVGDYTQRSVLPTPMRTPRTAAGGDVILQEA-------RNQLAMLNSKTPLLGGDNPNLEGGTGFEGVTPKSSKMTTPNVLPTPGATPLLTNGTPARSTGSATPLRDELGVNEDNLAGGAPGMSEAARLRH------------QRAQLQMSLSNLPEPQYQYEIEVPDVKPDEAEAKQAMEEDAADRXXXXXXXRRAAEEAEFQRRSAAVRRELPRP 540
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
K8YS86_NANGC (Pre-mRNA-splicing factor CDC5/CEF1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YS86_NANGC)
HSP 1 Score: 139 bits (350), Expect = 3.350e-33
Identity = 121/325 (37.23%), Postives = 172/325 (52.92%), Query Frame = 1
Query: 13 LEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIRRRTELNLPAPQVSDSELEELARMSGQAQAHGGGR-STSTLLGDYSE-AMPTPTPLRTPSTPAGEDVVMQARFFLTIIPRNLAALTSGQTPLLGGES--PHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXXSTPVPG-------TPSTLGLNDETSLASM----------SPVGS---VSSFGGSXXXXXXXXXXXXXXXXXRKAELRAKLEELPLPQNEYELVAPELLDEADGAPL--REEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRP 909
+ED+RRDEE+ R R +D + K+++++NLPQ + A++ NDP IRRR L+LPAPQV+D +LEE+ ++ QA +T+ LLGDY + A P TP+RTPST G+DVVMQ RNL A+ + +TPL GGE+ LE GTGF G PR TP+ TP + G +S+AS+ +P+ ++ GGS +A+L L LP Q YE+ P + +E + +EEDAA+RDAR+AA++ A+EE E RRS ++R LPRP
Sbjct: 255 MEDERRDEEESRLRNQDKKRHKKLVQENLPQMVQALNQLNDPASIRRRVPLSLPAPQVTDRDLEEIVKVGAQAAXXXXXXXATAGLLGDYRDRATPLATPMRTPSTAPGQDVVMQEA-------RNLLAMRAAETPLQGGEAVMSRLEGGTGFEGHEPRGLGGGGMTPGGGM--------TPMTARNEEGGRTPLSSGRVGGSSVASIKSRAHAAGGATPMRDELGLNQMGGSEEQQQLMVMSEKRRQKALRAQLAEGLRSLPEAQYTYEISVPTMEEEEERVTDVGKEEDAADRDARMAAKKLAVEEAELARRSAVLKRGLPRP 564
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
A0A2R6XHW3_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XHW3_MARPO)
HSP 1 Score: 108 bits (270), Expect = 1.280e-22
Identity = 108/322 (33.54%), Postives = 168/322 (52.17%), Query Frame = 1
Query: 4 LQDLEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIRRRTELNLPAPQVSDSELEELARM-------SGQAQAHGGGRSTSTLLGDYSE--AMPTPTPLRTPS-TPAGED--VVMQARFFLTIIPRNLAALTSGQTPLLGGESPHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXXSTPVPGTPSTLGLND--ETSLASMSPVGSVSSFGGSXXXXXXXXXXXXXXXXXRKAELR----AKLEELPLPQNEYELVAPELLDEADGAPLR--EEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRP 909
++++E KRR + + + RK+D + K +++ P ++ V+ NDP +R+R++L LPAPQ+SD ELEE+A+M +G+ G +T LL +Y++ A P TPLRTP TP G+ ++M+A NLA L QTPL GGE+P L + F G P+ TP G +T G+ ++++ M+P G+ R+AELR A L +LP P+NEY++V P+L E + P+R EED ++ AR A++AA + R+RS+ ++RDLPRP
Sbjct: 242 IEEVEGKRRADIEAQLRKQDVARNKIAQRRDTPASVMQVNKLNDPEAVRKRSKLMLPAPQISDRELEEIAKMGYASDLLTGEDDFREGTSATRALLANYNQTPAHPGMTPLRTPQRTPGGKGDAIMMEAE--------NLARLRETQTPLFGGENPELHP-SDFSGVNPKKKDIQTPNPIATPMR------TPSGGMGATPGMTPMKDSAMYGMTPKGTPIRDELHINEGMETPFDNAKAEKMRQAELRRNLRAGLGDLPAPKNEYQIVVPDLPPE-EAEPVRDMEEDMSDLLARQRADEAAKQAALLRKRSKALQRDLPRP 547
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
A0A176WFB4_MARPO (Uncharacterized protein n=3 Tax=Embryophyta TaxID=3193 RepID=A0A176WFB4_MARPO)
HSP 1 Score: 108 bits (270), Expect = 1.520e-22
Identity = 108/322 (33.54%), Postives = 168/322 (52.17%), Query Frame = 1
Query: 4 LQDLEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIRRRTELNLPAPQVSDSELEELARM-------SGQAQAHGGGRSTSTLLGDYSE--AMPTPTPLRTPS-TPAGED--VVMQARFFLTIIPRNLAALTSGQTPLLGGESPHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXXSTPVPGTPSTLGLND--ETSLASMSPVGSVSSFGGSXXXXXXXXXXXXXXXXXRKAELR----AKLEELPLPQNEYELVAPELLDEADGAPLR--EEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRP 909
++++E KRR + + + RK+D + K +++ P ++ V+ NDP +R+R++L LPAPQ+SD ELEE+A+M +G+ G +T LL +Y++ A P TPLRTP TP G+ ++M+A NLA L QTPL GGE+P L + F G P+ TP G +T G+ ++++ M+P G+ R+AELR A L +LP P+NEY++V P+L E + P+R EED ++ AR A++AA + R+RS+ ++RDLPRP
Sbjct: 242 IEEVEGKRRADIEAQLRKQDVARNKIAQRRDTPASVMQVNKLNDPEAVRKRSKLMLPAPQISDRELEEIAKMGYASDLLTGEDDFREGTSATRALLANYNQTPAHPGMTPLRTPQRTPGGKGDAIMMEAE--------NLARLRETQTPLFGGENPELHP-SDFSGVNPKKKDIQTPNPIATPMR------TPSGGMGATPGMTPMKDSAMYGMTPKGTPIRDELHINEGMETPFDNAKAEKMRQAELRRNLRAGLGDLPAPKNEYQIVVPDLPPE-EAEPVRDMEEDMSDLLARQRADEAAKQAALLRKRSKALQRDLPRP 547
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
A0A1D1Y886_9ARAE (Cell division cycle 5-like protein n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y886_9ARAE)
HSP 1 Score: 108 bits (269), Expect = 1.770e-22
Identity = 114/328 (34.76%), Postives = 164/328 (50.00%), Query Frame = 1
Query: 4 LQDLEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIRRRTELNLPAPQVSDSELEELARMS-------GQAQAHGGGRSTSTLLGDYSEAMPTP----TPLRTPS-TPAG--EDVVMQARFFLTIIPRNLAALTSGQTPLLGGESPHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXXSTPVPGTPSTLGLNDETSLASMSPVGSVSSFGGSXXXXXXXXXXXXXXXXX-------RKAELRAKL----EELPLPQNEYELVAPELLDEADGAPLR-EEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRP 909
+++LE KRR + + + RK+D + K +Q+ P IL V+ NDP +R+R +L LPAPQ+SD ELE++A+M G G +T LL +YS+ TP TP +TP TPAG + ++M+A NLA L QTPLLGGE+P L + F G PR +TP+ +P GL T M+P S+G + R+AELR L LP P+NEY++V +L+EA+ + EED ++R AR AE+ A +EE R+RS+ ++R LPRP
Sbjct: 242 VEELEGKRRVDVEAQLRKQDIARNKIAQRQDAPSAILQVNKLNDPEAVRKRAKLMLPAPQISDQELEDIAKMGYASDLVPGSEDLTEGSSATRALLANYSQ---TPRQGMTPFQTPQRTPAGKADAIMMEAE--------NLARLRESQTPLLGGENPELYP-SDFSGVTPRKREVQTPNPM----------ATPL-ASPGPRGLTPRTG---MTPARDGYSYGATPKGTPFRDDLHINTDVDGVKLEQRRQAELRKNLLSGLTTLPQPKNEYQVVIQPILEEAEEPEDKIEEDMSDRIARQKAEEQARQEELLRKRSKVLQRGLPRP 543
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
UPI001CC3513E (cell division cycle 5-like protein n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3513E)
HSP 1 Score: 105 bits (262), Expect = 1.390e-21
Identity = 113/331 (34.14%), Postives = 166/331 (50.15%), Query Frame = 1
Query: 4 LQDLEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIRRRTELNLPAPQVSDSELEELARM-------SGQAQAHGGGRSTSTLLGDYSEAMPTP----TPLRTPS-TPAGED--VVMQARFFLTIIPRNLAALTSGQTPLLGGESPHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXXSTPVPGTPSTLGLNDETSLASMSPVGSVSSFG----GSXXXXXXXXXXXXXXXXXRKAELRAKLE----------ELPLPQNEYELVAPELLDEADGAPLR-EEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRP 909
+++LE KRR + + + RK+D K K +Q+ P IL V+ NDP +R+R++L LPAPQ+SD ELEE+A+M +G + G +T LL Y++ TP TP+RTP TPAG+ ++M+A NLA L QTPLLGGE+P L + F G P+ +TP+ TP +GL T M+P SFG G+ K ELR + E LP P+NEY++V + +E + + EED ++R AR AE+ A ++ R+RS+ ++R+LPRP
Sbjct: 242 IEELEGKRRVDIEAQLRKQDTAKNKIAQRQDAPSTILQVNKLNDPETVRKRSKLMLPAPQISDQELEEIAKMGYASELIAGSEELAEGSGATRALLASYAQ---TPRQGVTPMRTPQRTPAGKGDAIMMEAE--------NLARLRESQTPLLGGENPELHP-SDFSGVTPKKREIQTPNPM----------ATPLL-TPGPMGL---TPRIGMTPSRDGYSFGMTPKGTPIRDELRINEDMDIHDNAKLELRRQAEVRRNLRSGLTNLPQPKNEYQIVVQQPPEENEEPEDKIEEDMSDRIAREKAEEEAKQQALLRKRSKVLQRELPRP 546
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Match:
A0A7S0ZPC1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZPC1_NOCSC)
HSP 1 Score: 105 bits (261), Expect = 1.830e-21
Identity = 103/325 (31.69%), Postives = 150/325 (46.15%), Query Frame = 1
Query: 4 LQDLEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIRRRTELNLPAPQVSDSELEELARMSGQAQA---HGGGRSTSTLLGDYSEAMPTPTPLRTPSTPAGEDVVMQARFFLTIIPRNLAALTSGQTPLLGGESPHLEEGTGFGGAAPRXXXXXXXXXXXXXXXXXXXXSTPVPGTPS--------------------TLGLNDETSLASMSPVGSVSSFGGSXXXXXXXXXXXXXXXXXRKAELRAKLEELPLPQNEYELVAPELLDEADGAPLREEDAAERDARLAAEQAALEEEEFRRRSQPVRRDLPRP 909
LQ +E++ RD+E++R RK D+ K+KR+ + NLP+ I ++ NDP +R+RT LNLPAPQ++D ELE++ +M A A ST L+ Y E P TPLRTP ++++A+ + A S QTPL G E+P + E T + GA PR GTP LGL T S + V + + +++A+L+ LP P N+ E+ PEL +EAD E+DA + D EQ L + E + S+ V+RDLPRP
Sbjct: 260 LQAVENRNRDKEEQRMRKDDERKLKRLKQDNLPETIEMINKLNDPQQLRKRTSLNLPAPQLADEELEQIVKMGADAAALAAQSADSSTVGLVQSYGET-PGSTPLRTPRQQ--NTILVEAQ--------DAIARNSMQTPLYGDENPQMHE-TDWAGALPRKTGGITPNIYAEQARQG--------GTPXXXXXXXXXXXXXXXXXXXXRALGLTPGTPQESPTVVAGLRD---GLSLNGDVDMDMPKLKHQMQLKIKAQLDNLPEPANDLEISMPELGNEADPVETLEKDAEDVDKERQQEQKKLRDRELAKTSEAVKRDLPRP 561
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9953.24063.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.08e-121 / Id = 69.33 Expect = 9.66e-85 / Id = 56.76 Expect = 8.13e-47 / Id = 41.28 Expect = 1.25e-33 / Id = 37.59 Expect = 3.35e-33 / Id = 37.23 Expect = 1.28e-22 / Id = 33.54 Expect = 1.52e-22 / Id = 33.54 Expect = 1.77e-22 / Id = 34.76 Expect = 1.39e-21 / Id = 34.14 Expect = 1.83e-21 / Id = 31.69 Sequence D7FTA5_ECTSI A0A6H5L1Z3_9PHAE A0A835YNI3_9STRA A0A7S2SCC5_9STRA K8YS86_NANGC A0A2R6XHW3_MARPO A0A176WFB4_MARPO A0A1D1Y886_9ARAE UPI001CC3513E A0A7S0ZPC1_NOCSC Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 369.8 Seed ortholog evalue 1.2e-99 Seed eggNOG ortholog 2880.D7FTA5 Preferred name CEF1 KEGG ko ko:K12860 KEGG Pathway ko03040,map03040 KEGG Module M00353,M00355 GOs GO:0000018,GO:0000019,GO:0000228,GO:0000350,GO:0000375,GO:0000377,GO:0000393,GO:0000398,GO:0000723,GO:0000781,GO:0000782,GO:0000783,GO:0000784,GO:0000974,GO:0000981,GO:0000988,GO:0000989,GO:0001067,GO:0001076,GO:0001134,GO:0001135,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003691,GO:0003697,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006275,GO:0006282,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007568,GO:0007569,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008380,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010948,GO:0016043,GO:0016070,GO:0016071,GO:0016233,GO:0016604,GO:0019219,GO:0019222,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031627,GO:0031848,GO:0031974,GO:0031981,GO:0032069,GO:0032074,GO:0032200,GO:0032204,GO:0032205,GO:0032207,GO:0032208,GO:0032210,GO:0032211,GO:0032213,GO:0032214,GO:0032502,GO:0032768,GO:0032770,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033262,GO:0033365,GO:0033554,GO:0034502,GO:0034613,GO:0034622,GO:0034641,GO:0042162,GO:0042592,GO:0042802,GO:0042803,GO:0043047,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043247,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045292,GO:0045738,GO:0045786,GO:0045910,GO:0045934,GO:0045950,GO:0046483,GO:0046983,GO:0048239,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0050999,GO:0051000,GO:0051052,GO:0051053,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051179,GO:0051252,GO:0051276,GO:0051336,GO:0051341,GO:0051346,GO:0051353,GO:0051641,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0061820,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070187,GO:0070198,GO:0070727,GO:0071006,GO:0071012,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0072695,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090329,GO:0090342,GO:0090344,GO:0090398,GO:0090657,GO:0097159,GO:0098505,GO:0098687,GO:0098847,GO:0140110,GO:1901360,GO:1901363,GO:1902494,GO:1902576,GO:1903506,GO:1903516,GO:1903517,GO:1903770,GO:1903824,GO:1904353,GO:1904354,GO:1904356,GO:1904357,GO:1904429,GO:1904430,GO:1904533,GO:1904534,GO:1905777,GO:1905778,GO:1905838,GO:1905839,GO:1990904,GO:2000104,GO:2000112,GO:2000113,GO:2000278,GO:2000279,GO:2000772,GO:2000773,GO:2001020,GO:2001021,GO:2001141,GO:2001251 EggNOG free text desc. RNA polymerase II transcription regulator recruiting activity EggNOG OGs COG5147@1,KOG0050@2759 Ec32 ortholog description Domain of unknown function DUF3351 Ec32 ortholog Ec-13_003870.1 COG Functional cat. ADK Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko03041,ko03400 Hectar predicted targeting category other localisation Exons 6 Model size 915 Cds size 915 Stop 1 Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622817354.5806723-CDS-P-canaliculata_contig9953:2016..2171 1622817354.5806723-CDS-P-canaliculata_contig9953:2016..2171 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 2017..2171 + 1693495242.910565-CDS-P-canaliculata_contig9953:2016..2171 1693495242.910565-CDS-P-canaliculata_contig9953:2016..2171 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 2017..2171 + 1622817354.5947082-CDS-P-canaliculata_contig9953:3360..3445 1622817354.5947082-CDS-P-canaliculata_contig9953:3360..3445 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 3361..3445 + 1693495242.9331665-CDS-P-canaliculata_contig9953:3360..3445 1693495242.9331665-CDS-P-canaliculata_contig9953:3360..3445 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 3361..3445 + 1622817354.6097794-CDS-P-canaliculata_contig9953:4997..5133 1622817354.6097794-CDS-P-canaliculata_contig9953:4997..5133 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 4998..5133 + 1693495242.9498017-CDS-P-canaliculata_contig9953:4997..5133 1693495242.9498017-CDS-P-canaliculata_contig9953:4997..5133 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 4998..5133 + 1622817354.6254342-CDS-P-canaliculata_contig9953:5742..5933 1622817354.6254342-CDS-P-canaliculata_contig9953:5742..5933 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 5743..5933 + 1693495242.9624968-CDS-P-canaliculata_contig9953:5742..5933 1693495242.9624968-CDS-P-canaliculata_contig9953:5742..5933 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 5743..5933 + 1622817354.641639-CDS-P-canaliculata_contig9953:7256..7454 1622817354.641639-CDS-P-canaliculata_contig9953:7256..7454 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 7257..7454 + 1693495242.9736116-CDS-P-canaliculata_contig9953:7256..7454 1693495242.9736116-CDS-P-canaliculata_contig9953:7256..7454 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 7257..7454 + 1622817354.6560318-CDS-P-canaliculata_contig9953:8521..8671 1622817354.6560318-CDS-P-canaliculata_contig9953:8521..8671 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 8522..8671 + 1693495242.9841805-CDS-P-canaliculata_contig9953:8521..8671 1693495242.9841805-CDS-P-canaliculata_contig9953:8521..8671 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9953 8522..8671 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9953.24063.1
>prot_P-canaliculata_contig9953.24063.1 ID=prot_P-canaliculata_contig9953.24063.1|Name=mRNA_P-canaliculata_contig9953.24063.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=305bp
FLQDLEDKRRDEEDERERKKDDIKIKRMMKQNLPQQILAVSAANDPLPIR back to top mRNA from alignment at P-canaliculata_contig9953:2017..8671+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9953.24063.1 ID=mRNA_P-canaliculata_contig9953.24063.1|Name=mRNA_P-canaliculata_contig9953.24063.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=6655bp|location=Sequence derived from alignment at P-canaliculata_contig9953:2017..8671+ (Pelvetia canaliculata dioecious)TTTTTACAAGACCTGGAAGATAAACGTCGAGACGAAGAGGACGAGCGGGA
GCGGAAGAAGGACGACATCAAGATCAAGAGAATGATGAAACAGAATCTGC
CCCAGCAGATTCTCGCCGTCAGCGCCGCAAACGACCCTCTACCCATCAGA
AGGAG GTGTGTTTATGTTACATAGTATATATAGAATATGGTATATGTAGA
ACTCCATCAGAAGGAGTGTTTGTGTTAAATAGTTAAAAAAAAAACAAAAA
AAAAACAGAGAGAGGTGTGGTTCATGTTACATAGTACATATAGTATATAG
TAAATACAGAAACCCTTCAGAAGGAGGTGTGTTTATTGTTTACGTTACAT
AGTATTACCAATAATAGTATATACATTTATTTATAGTATCAACGATCTAT
TTTTTTCGAGAACCAGTCCCGAAGTATGCTGTCGTTGTAGAGTGCTGTGC
TTGTACTGTAGATGGATGTGCACATGAGGATACGGTACGTTAAAATACGA
TGAGAAAGTGTACAGTATAACGGTGGGCTTCTCCCCGACATTAGGCTGTT
GACCCAATGTTACTTCCTCTGGGAAACTCGATTAGATGCCATGAAGATGT
TTTGTCTTTGCAGCATATGATCCCACTTAAACGTTTTGACATTTTTTTCC
CCCTGACTGAGGGATGCTCAGAAGGTCTAGATGCGTTCGAATTTTTCTTC
AAAATACCATTGGGAAAGAAGGAACAAAGTGTTGGATGGGACAGACGATT
AGAAAATTGCAGTATGCATGTCAGCACAGTAAAGTACAGTACGCGATCCA
AATCGGCTTTGTCCCCCCCCCTATATTCCTGACTTACCTTCTTCCTCTCT
ACATTCAAATAATTTTGTCGTTTTCAGCTAGTTTCTGCTTTGAAATCGTT
TACAGAGTATCTTTTTGGCGGTTGCATCCAGCCAAGAGGAGTTCTCACCC
AAGAGGCCTCTTTTTAACGTGGGGGAAGGGGGGCCAGACAAAACATCTGC
TAAATTTTTGCCGCAATGTTGTACTGTATCATTGTAACATCCTAGAAGCC
AAAAAAAAATGGTTCCGGTAGTAGGCGCGGCGTTCATATACCCACCTAAC
TAGTAAGAGTATCCGATCCGTTTTTTCCTTTATAATTTATCCTGCAAATC
AATCCAAAGGTGTACTCATGAGTAGAGCTACCCGAGTCCTGAAAGAGTTG
TCCCGGGTTATACTCGTAGGTTTCGATTTCCCCACCAGGCGTCCACCGTA
TATCCCACTATAACAGTGCATACTGTGAGTACTGTAACCACAGGTAAGGC
TTATATCTTGCGTGCTGTGCTGTACTGTACTGTACCCACTTCAGGACGGA
GCTGAATCTTCCGGCACCTCAGGTCTCCGACAGCGAACTGGAAGAGCTCG
CCAGAATGAGCGGCCAGGCGCAAGCCCAC GTGAGACACTTTAATAGCCCA
AGTTGGATTGTGTTGTATTATTAATATGAAATATTTATATTAATAATGTA
CCGGCACAGACACTGTGTTGGTATCTGATATTGTATTGATATTTAATAGT
GACCATTGATAGTAACAGTACAGTATAGTGACCCTCTCGCAGCGCCCTTC
GGAAGCGAAGATATAATTACAATATAATAACACTAGGCGTATTTTTATAG
TCTAATAGTGTGCAGTGTTTTAAAGTGTATACATGTAGTGTATAATATAT
AATTTCATCAATAGGTAATTATAATAATAGAGCTCTTGAAGGCATCTTGA
GGTACGGAGTTCGACGGATCACACACCCTTTACACTGTATTATGAAGAAG
AATGGTTGCTGTTCCTTCCCCGAACGACGAATCAATTGGTACTGTACCGT
CTGTAATCGTAGGAGTAGCATTTTCAGCCATTACAGAAACGTTAAATAGA
CATACATTTAGTAACTACAATACACAATAATGGAACGGAAGTTCAGAAAA
ATAGGAACGATTGGAAACGCTCATGGAAAACGTCCGTGTCCAACGTTCGT
TTGGGAGGTTTTTTTTTGTGGAATACTTTACTGTTGATAAACACTGTACT
AAATACTCTAAAGCTATACCAATATTATTTTAACAGGTGTAGACTAGGTG
TAAAAAGACCGGGAGATTTGAAACGGACAAGTCAGAGTCTGGGAGGGGGA
AGGAAACATGAAAAGCATGTAGGTTCCTTTCGAAAATCGATGTGCGGTGG
TGATGGAGTCTGCGTGTACCTCGGAGCAATCCATGTAACGTTCCCGCAGG
CGTTCGTCCTCGATATTTGTTATTGATGGTGTAGTCTAGGCTGTAGGCTG
TAGGCTGGTATTTGGTATGAAAAGTGTTTTGAGTTGACACATTTTAGCCG
CTGGGCGTACCGTGCCCAATATAGAAAAATAGGAAAGGTTCGTAATGGTA
GTCATTTTATGCTAAAGGCCCTTTTCAGACATGGATATTTACTGCAATGC
CTTATAGTTAGGTAAGTGATGGAATGTACAGCATGGCCTCATCTTCCCTT
AATTTTGATCGACTTTGTAGGCACGTAGGAGGAAAAGCTAGCTTCCAGCA
GCATTCGTCTTTTTTTCTTGTCAAGCTCGCTGCTGTGTGTGGTGTTTTGA
TGTGTTTTGATGTGTTTGGTTGCGGTGAAAATCATGCTGAGATACCATAG
TCATGAATCAACCATCCCCGACACTTAACTGTACACAACATAATAAAGGC
CCCTACTGTCACGACGTTTAGTGCTTGTCACGGTTGGAACAAAATACCAC
GGGTTGGGACCGAAGGTGTCAGTCATCATGGTTACCACCGGGATCTGGTC
TGGTGAAGAGCTATTATACCAGGACGGTTTCAAGAGGACATATTAATCGT
GCCCAAGTACACTCCTTAGAGGACAGCTTTCAAGCTAACTCCGTCGTATT
TTTGGCTTTTCGATGCATTCGTGCCTCGTTACTAAATACTGGTATAATAA
TACATGTTTTATTTTGTTTTGTTTGCCCCAGGGAGGCGGAAGGTCGACTT
CGACCCTGCTGGGGGACTACTCGGAAGCCATGCCGACGCCTACTCCCTTG
AGAACTCCCTCCACCCCTGCCGGCGAGGACGTGGTGATGCAGGCGAGATT
CTTCTTAACTATTATCC GTTTCCTTCTTTATCTCGTCGAAATTTCCGGTG
ATAATCTCACACACACAAAATTTGGGAGTTGCCGCCTTTTACGAGGCATT
TTGATGACATCACACCTCTTGAAAGTGAGATGAAAAACAAACTAAACCAA
GCTAGATAATTTTTATTTTTTTAGTTCGTGTTTTTAGTACGAGGGAGCTG
TATCTCGTAGGGCTGGCGAAACGGAGTAGAGGCTATTATCTATAATAGAA
ATATAGCCTATACAGCGAACAGTGAATACTTTAGTGCTCGGTTGTGGTAT
GCATGCTCAACGTACAGGACGCTTGATGGCGGTAGAGCGCCGGATGGCAT
GAAATGAAGAGGCTATCGTCATGATTCGATGTCTTCCTTTTGTTGTCGTG
GCTCAAAACCTCCCCTCGCTCGCACCGGCTTCAGTCCTTTGGTGCCCATG
ATATCGTGGCTCAAACCCTCGCGTGCTTGTTATTTCCCACCCAAGTCAAA
CCTCCTCCGTTAAAGATGATTTTTATTCTGTACTCTTCCGTACTTCTATT
TTCAAAGAAAAATACTTAGCCTTCACCAAAATTAATTACACTTCGCTCTC
TCACTCTCTCATGTCTGCCCAGGAAGCGCGTAACCTGGCAGCCCTCACCT
CGGGGCAAACGCCTCTGCTCGGGGGCGAGAGCCCTCATCTTGAAGAAGGC
ACGGGCTTCGGCGGAGCGGCCCCACGCCGGCAAAGAATGACGACGCCGAG
CGCCGTGGTGGTTGCCGGAGCAGCGTCCGGGGGGGGATCCACCCCCGTTC
CAGGAACGCCTTCCACT GTTGGTGGTCTAACGCCTGGGGGTGGAGGCGCT
GGGGGGAGGGCAGGGCCTGGCGGGGGTGGAGGTACTCCCATGAGGGATGA
GGTACGAAAGCGTTTTCGAAACCGGGATTCCTGTACTCTTCCGAGCTGTA
TTGGGGTAGTCTGTATACTGTATCCTGTACAGTCGTTCGTTACGCGGTAC
TCTGAGGTCTTTTGTTCTGGCTCTTGTAGTGGAAAGCGTGGGAACGTGAG
TGAGTAGAATTTCATCTATTGATGTGGTTGATGAGGTAGCTAGCTGTAAG
AGTGTGCTGAACTGGTATCGCGATAAAAAATCGTACATGATAAACCGGGT
AGATATGCGAAGATCCTTGAGGACCACAGGCACGATGCCAACGAGTGCTG
TAGGTGGGATTGACAACCTAGCGCGTTGAGGCCCATCGACCGTAAGTGGG
ATACAAGCAATCCAAAACATATATGTGTGTATCGACCGTAAGTGGGATAC
AAGCAATACGAAACACCTATGTGTGTATTGACCGTAAGTGGGATACAAGC
AATCCAAAATATCTATGTGTGTATTTGTTGTGTCTTGTATTTGTTGTGTG
TCTTGTATTTGTAGTGTGTCTTGTATTTGTTGTGTGTCTTGTATTTGTTG
TGTGTCTTGTATTTGTAGTGTGTCTTGTATTTGTTGTGTGTCTTGTATTT
GTTGTGTGTCTTGTATTTGTAGTGTGTCTTGTATTTGTAGTGTGTCTTGT
ATTTGTAGTGTGTCTTGTATTTATTGAATTGCTCGTAGCCGCACAATCCG
CGCGGTTTGTGTGTGTGCATTTATATAATAATACATAACCACGCAATCAG
GCCGTGTCGTACTAATGATTCTTGAGCTACAGTACTCACTCGTATTTGCC
TTCCCCCCAATAAGAGATGAACCTCTGATTGTGTGTATGTGTAGTTAGTT
ATGTCGCAGGTTTTCGAAGCTATGTCGCTTTTATATTTCCATATTCGATT
GTTAGAATCCGGTGGTATCAATAGTTAGCGTTTGAGTTATAAAAAAAGCG
TTTGAGTTATATTTTAAAGTCAGACCTTTGTCCCGTCGGAACTCTTTGTT
TTTTTCATCGGCCAAAGCCTATCTGTTTACTGTAGACAAAACATTATCCA
TCGAATTAACTTTTTTTCTTTTTGTCCGAAACACGTACAGAAAACTAAAA
CACGCGGAACACAATCCCTTATCTGTTTGCGCCGGTACGCGGATTCGTAT
TCCATTCCTATCTCTCTCCCCCCCCCCTCCCAAATCCCACTCATTATCCC
ATACATTATCCCATACATTCCTGTCTGTACCTATCAATAGCTGGGCCTGA
ACGACGAGACTAGCTTGGCGAGCATGTCCCCCGTGGGCAGCGTATCTTCC
TTCGGGGGTTCTTCTTTCGGAGGGAGCCTGTCCGCGAGGGAAGAAAGGGC
GAGGCAAAAGAGGCGCAAGGCGGAGCTGCGAGCCAAGCTGGAGGAGCTTC
CATTGCCGCAAAACGAGTATGAATTGGTGGCTCCCGAG GTATAACACAAC
GAGAAATGCTCTGTAGTCGCGACCAACGGTATAATATATTGATATCATTA
GTACCAGTATAGGCTTTACTCCGTGAAATGTTGGAAAATGCGTAAAATAT
GTACCCCTAGGGGACGGGTAAAGTGTATCCCCTCTCGGAGCTGCGAGCCA
AGCTAGAGAAGCTTCCATTGCCGCAAAACGAGTATGAACTGGTGGCTCCC
GAGGTATAACACAACGAGAAATGCTCTGTAGTCGCGACCAACGGTATAAT
ATATTGATATCATTAGAGTACCGGTATAGGCTTTACTCCGTGAAATGTTG
GAAAATGCGTGTGGAATATGTACCCCTAGGGGACGGGTAAAGTGCATCCC
ATCTCCCCATCTGACGCCCCCCCCCCAAACAAAACCCAAAAAACATATAT
ATATGTACACCGCACTGTATAGATAAATAGTTAAAAAATTAAAGTCGTCG
CAAAAGCTTCTTCACGATTTTATCTCTCTATTTCTTAGTTTTTTTTAGTG
CGGGATTGTTCCTTTGCTGTTCTGCTTGATTGCGCTACTGATGAATCTTG
ATGGATTTTTTTAAGCGGCTTCTCTTAATACAGTATTACAGTATAATGAT
AGCACAATAGCATATTAACAATAGCATAGGCTCTGTCTGATGAATGATCC
GCTGGATTTTATCGGGGGTCTTCCTGCTGAACGTGTTCCTTTGTAAGAAA
AATGGGATACTGGGATCAAAAACACAGTATTCATACCCCGCACAAAACAG
TCTCATCGCATGCGTGGGACAGTACCTGTTAAAACGGCATCATTTGGTGC
TATTCTATCCTAGGTACTATAGTATCGTACGACGCTATTAAATAGATCGA
TGGCACGATGAATACAGTAGAGTACTACTCTGTGGCATACCGCGCCATAT
CGCAGTACTGGATATGTCGTACCTAGCCCGAGATTCTCAACCGTATTATT
ATTACCCCTTGACGATTTCTCCATTTCCCCCTCCATCCCCGCCTCCGTCT
CGTTGGTGGAAACCCCTCTATTAACATCTACCTACGAACATATATCACTT
GTCAGTTACTGGACGAAGCGGACGGGGCGCCGTTGAGGGAAGAAGACGCC
GCCGAGCGCGACGCGAGGTTAGCGGCGGAGCAGGCCGCTCTGGAGGAGGA
GGAGTTTCGCAGGCGCTCGCAGCCGGTTCGGCGCGACCTTCCTCGCCCCG
GGTGA back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9953:2017..8671+
>mRNA_P-canaliculata_contig9953.24063.1 ID=mRNA_P-canaliculata_contig9953.24063.1|Name=mRNA_P-canaliculata_contig9953.24063.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1830bp|location=Sequence derived from alignment at P-canaliculata_contig9953:2017..8671+ (Pelvetia canaliculata dioecious) back to top