mRNA_P-canaliculata_contig99437.24056.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig99437.24056.1 vs. uniprot
Match: D7FQA1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA1_ECTSI) HSP 1 Score: 110 bits (275), Expect = 1.390e-26 Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = -1 Query: 193 FGTIYACAAQRGNLTKVGVQTLSEEMTRFFNTVVLDMDGTSVRFEDMHHGYGSNGDSLLWVTVGVEVRRVPNPKNMKF 426 FG I+A AQRG LT +G++TLSEEMT FFNTVVLD+DGT+VRF DM+HGY S G+ L VTV V V R+P P+NMKF Sbjct: 236 FGKIHARVAQRGRLTDLGIRTLSEEMTHFFNTVVLDLDGTAVRFRDMYHGYNSRGEPSLRVTVSVVVHRLPKPENMKF 313 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99437.24056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99437.24056.1 >prot_P-canaliculata_contig99437.24056.1 ID=prot_P-canaliculata_contig99437.24056.1|Name=mRNA_P-canaliculata_contig99437.24056.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=120bp MTCKRALSHVQTHATTIHLCRATSPTIMRRALQRSRYASDDSEFHVLRVRback to top mRNA from alignment at P-canaliculata_contig99437:333..758+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig99437.24056.1 ID=mRNA_P-canaliculata_contig99437.24056.1|Name=mRNA_P-canaliculata_contig99437.24056.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=426bp|location=Sequence derived from alignment at P-canaliculata_contig99437:333..758+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig99437:333..758+ >mRNA_P-canaliculata_contig99437.24056.1 ID=mRNA_P-canaliculata_contig99437.24056.1|Name=mRNA_P-canaliculata_contig99437.24056.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at P-canaliculata_contig99437:333..758+ (Pelvetia canaliculata dioecious)back to top |