mRNA_P-canaliculata_contig9920.24037.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: D8LAX0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX0_ECTSI) HSP 1 Score: 698 bits (1801), Expect = 1.510e-224 Identity = 509/1260 (40.40%), Postives = 612/1260 (48.57%), Query Frame = 1 Query: 4 ISFMLGRELDKRGLEKESWDYLSNAAVPWTRQARYLRAALSVPAVPSSQQDLDLAMSSLEVAVERLLPTADATRQGGRGRQ--------------DETRPLSACFYGGLNYPDVALDHLPLLAFSDYRF-RRKRHGF-------RRSDERLGGDLRDGA-------DLGNDRIGTRAGAGR------------DNDGVSPYGVIARLFSRLCPDLGSFVSPGLEAFAGRGGLAPKGFEGGRFEQAFEKREGRVGVMFVSSRFWNHGTTKTVAGLMRLLPRDFFEVTIASWPMPADDWTEEHVMPQVDRRPVNLMQNRTASLLRMAKQRPDVVVFVDASLDAKTFLLSFGRVAPVQVALWGHAPTLGIPSIDYYAVPEALVGDAWQGKKSPTFEMDAREGVGEEDAVCPSDSELDLPADDCYEDDDSLLLGPRDAAGVQEVDDCDGGGEDSACA--GSSRGGQAETRAGGGARAGSGSEALEEFSCGSGGREE----------------------------GVSPAGRRTCDECLEADAGGHAVTRESIWPSEKC-ELSGPGRAT-----------ADAAKAVERGARIGGIGFPAAEAATVQRNFREPEDFGDTGLDDDDXN--NEHEDNGDL-------SGLTSRGTAHS-------------TVVGHRNVRRNDATVDDAGTGTEGG---------------------GRXXXXARI---------------------AGVHVEVHIRKYITGPGQVIIGGKRISP--------------------LGELDEGDDDXXXXXYDYDDK---SGYGR---------DRRIAVPPVKITATTRRAPAPVYAAGATATARSPLPPRDNPLPLKNDLGGGSSYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPPWAGVDYAGSVEEQVVFLEGLGAFVTPPGWEGKLGTGDLARAADAAEVRRRHLLPQECRLAVLPIPVYHFHPEFDEAVGMLIDRHPLIHVVVAVEETSAEESGAELEFFRHDVLQHAFPPLWTEKLRARLKRRLGDDVWRLHLLPPLDSWDYFALLGAADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARFVQALASDLELPASICAAKDVEHYVDLVARLCLDQAWAVKVAAVLDYYARDWVYVHPDASGASRSGGEGAQPPXXXXXXXXXXE-----------AEYPYGGSAKREYSAWVRGEDHVNDWAEFLWRVSRPGVFVDFSGD 3213
ISFMLGREL KRG +KESW YL++AA PW RQ +R+ALS+P V SS+QDL LAM++LE + R P D PLS C +G LNYPDVA D LPLLAF+D+R+ RR R GF RRS GGD +G ++ D AGR D D +S YG I RLF RLCPDLG+FV+P L+ + G LAP+ G R E +GRV V FVSSRF NH TTK +A LMRLLPR FEV + SWP P+DDWTEEHV+ + R NL+ NRTASL ++A +RPDVVVF DA DAKT+ L+FGRVAPVQ+ALWGHAPTLGI SIDYY VPE LV DAW G AR+ E +A+ DD E++D L R A DG G D G G A GGG SG + + GR + G P C L AGG ++ P +K + SG +A A G+ AA + E ED+ N D+GDL + L RG ++ + DA D+ G E G G ARI A E +R+++ GPG++IIGG+ + + DE DDD Y+D YGR VY + L +D+ G WP PWAGVDYA +VEEQVVFLE LGAFV PPGW G+LG+G LAR ADA+E+RRRHLLP+ LAVLPIPVYHFHPEFD AVGML++RHP IHVVV VEET+AE E EF++HD LQ+A PPLWTEKLR+RL R+G+++WR+HLLPP+DSWDYFA+LG ADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGAR+VQALASDL LPAS CAA + HYVDL ARLCLD+ WA +V+ +L Y RDWVY+ P+A QP + A+ P YSAW RG HV +WA FLWRVSRPGV +F D
Sbjct: 148 ISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMAALEGWLRRQEPXXXXXXXXXXXXXXXXXXXXXXXXXXXDFETPLSTCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGFEAVDADYRRSPAGGGGDKDEGVPPRGVSGEVDGDAWRKPGLAGRSAWKGLDENGEDDADRMSLYGPIGRLFGRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEA-----DGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGIGSIDYYVVPEPLVADAWLGDDEL---QKARDSTCEGEAI-----------DD--EEEDDFLFWERPAGP-------DGSGSDGGMKHRGVRHGSDATASDGGGGGGVSGRHRNDAWQ----GRRDPPRSFVFPEPPTRDYAGPPLDPFDDDGNGEEPRNAFRCRNGLPPRAGGSGPATGAVDPEKKVGQTSGAAXXXXXXXXXXXXXXVEAGGGRAGSAGRSGMRLKVGMAAAAEMEGAE-EDYDXXXXXXXXMNLYGIFTDDGDLVEYESLVATLKERGKGREELERIVSALLDEQALLDEQEEEGGDANGDEGGWWPEEGRERGDDSVATKNQHGQHYPYGGDVERSARIHQHARSRAARDDAQNGAAKSPARSRQEEILRRHVIGPGRLIIGGEEVDVGYSNGGGGDGDNIFGGRGTYADDFDEDDDDQGV----YEDGLFVDEYGRVFDXXXXXXXXXXXXXXXXXXXXXXXXXXGVY---------------EGVLYDDDDVEGDGGGVYFFRNGDKPLGDDGGFADDDYFQEHYYDGGDRGCDRSSGDWPRPWAGVDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEMRRRHLLPEMSYLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETTAEALRTEGEFYQHDHLQYASPPLWTEKLRSRLAARVGENIWRVHLLPPVDSWDYFAILGVADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLSHYVDLAARLCLDEEWADEVSDIL-YAVRDWVYLTPEAPREKPHDRRPPQPQADRFSVDDHSQSAREGCGGADGADPPRAVRRGGRYSAWARGRRHVQEWAGFLWRVSRPGVPAEFPVD 1354
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: A0A6H5JPP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP0_9PHAE) HSP 1 Score: 560 bits (1444), Expect = 5.370e-171 Identity = 475/1292 (36.76%), Postives = 582/1292 (45.05%), Query Frame = 1 Query: 4 ISFMLGRELDKRGLEKESWDYLSNAAVPWTRQARYLRAALSVPAVPSSQQDLDLAMSSLEVAVERLLPTADATRQGGRGRQ-----------DETRPLSACFYGGLNYPDVALDHLPLLAFSDYRFRRKRHG--------FRRSDERLGG----DLRDGA-------DLGNDR------IGTRAGAGRDNDG------VSPYGVIARLFSRLCPDLGSFVSPGLEAFAGRGGLAPKGFEGGRFEQAFEKREGRVGVMFVSSRFWNHGTTKTVAGLMRLLPRDFFEVTIASWPMPADDWTEEHVMPQVDRRPVNLMQNRTASLLRMAKQRPDVVVFVDASLDAKTFLLSFGRVAPVQVALWGHAPTLGIPSIDYYAVPEALVGDAWQGKKSPTFEMDAREGVGEEDAVCPSDSELDLPADDCYEDDDSLL----LGPRDAAGVQEVDDCDGGGEDSACA--GSSRGGQAETRAGGGARAGSGSEALEEFSCGSGGREE-------------GVSPAGRRTCDEC---------------LEADAGGHAVTRESIWPSEKC-ELSGPGRATAD------------------------------AAKAVERGA----------------RIGGIGFPAAE-------AATVQ---RNFREPEDFGDTGLDDDDXNNEHEDNGDLS-GLTSRGTAHSTVVGHRNVRRNDATVDDAGTGTEGGGRXXXXARI---------------------AGVHVEVHIRKYITGPGQVIIGGKRISP----------------------LGELDEGDDDXXXXXYDYDDK---SGYGR----DRRIAVPPVKITATTRRAPAPVYAAGATATARSPLPPRDNPLPLKNDLGGGSSYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPPWAGVDYAGSVEEQVVFLEGLGAFVTPPGWEGKLGTGDLARAADAAEVRRRHLLPQECRLAVLPIPVYHFHPEFDEAVGMLIDRHPLIHVVVAVEETSAEESGAELEFFRHDVLQHAFPPLWTEKLRARLKRRLGDDVWRLHLLPPLDSWDYFALLGAADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARFVQALASDLELPASICAAKDVEHYVDLVARLCLDQAWAVKVAAVLDYYARDWVYVHPDASGAS-RSGGEGAQPPXXXXXXXXXXEAEYPYGGS-------AKRE---YSAWVRGEDHVNDWAEFLWRVSRPGVFVDFSGD*LVGAREVLGWGRG*TFFCGAAGASSN 3294
ISFMLGREL KRG +KESW YL++AA PW RQ +R+ALS+P V SS+QDL LAM++LE + R P + Q R D PLS+C +G LNYPDVA D LPLLAF+D+R+ R+ G RRS E GG D +G ++ D +G AG G D +G +S YG I RLF RLCPDLG+FV+P L+ + G LAP+ G R E +GRV V FVSSRF NH TTK +A LMRLLPR FE+ ALWGHAPTLGI SIDYY VPE LV DAW +G+++ DS + D E+DD L GP DG G D G G A GGG GSG + + GR + P CD+ L AGG ++ P +K E SG AA +E G + GI + AT++ + + E LD+ +E E GD + G G +V AT + G GG ARI A + E +R+++ GPG+ IIGG+ + G+ DE DDD Y+D YGR + G L D+ ++ D GG + WP PWAG DYA +VEEQVVFLE LGAFV PPGW G+LG+G LAR ADA+E+RRRHLLP+ LAVLPIPVYHFHPEFD AVGML++RHP IHVVV VEET AE E EF++HD LQ+A PP+WTEKLR+RL RLG+++WR+HLLPP+DSWDYFA+LG ADVVLDPFPVGNL+AAVDAFALGTPVVTLPSRQRAGAR+VQALASDL LPAS CAA + HYVDL ARLCLD+ WA +V+ +L Y R+WVY+ P+A G PP A GG+ A R SAW RG H+ +WA FLWRVSRPGV +FS D R+ G R +C +AG SN
Sbjct: 392 ISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMATLEGWLRRQEPLVEDPPQPARXXXXXXXXXXXXXGDFETPLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGLEADDAGSRRSPEGGGGTGDGDKDEGVPPRGVSGEVDGDAWRMPGLVGRSAGKGLDENGGDDADRLSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEADGGLRGEA-----DGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEI-----------------------------------------------------------------------ALWGHAPTLGIGSIDYYVVPEPLVADAW---------------LGDDELQTARDSTCEGEVLDDEEEDDFLFWERPAGP------------DGSGNDGGMKHRGVRHGSDATANDGGG---GSGRRRNDAWQ----GRRDPPRSFGFPEPPTRDFGPPPLDPCDDDGNGEERRNAFRGRNGLPPRAGGSGPATGAVDPEKKVGETSGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAEMEGGEDDYXXXXXXXXXXXXINLYGIFTDDGDLVDYESLVATLKARGKGREKLERIVSALLDEQALLDEQEQGGDANEGEGGWWPEEDRQRGDDSV----ATENQHGQHYPNGGDVEMSARIHQRARSRAARDDAQDGAKKSPARLRQEDILRRHVIGPGRSIIGGEEVDVGHSNGDGSGDDGDNTFGGGAAYAGDFDEDDDDQGM----YEDGLFVDEYGRVFDGEXXXXXXXXXXXXXXXXXXXXXXXXGVY---EGVLYDDDD---VEGDGGGVYFFRNGDKPLGDDGGFADDDYFQGYYDGDDRGCDRSSGD-----WPRPWAGFDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEIRRRHLLPEMSSLAVLPIPVYHFHPEFDVAVGMLLERHPSIHVVVVVEETPAEALRTEGEFYQHDHLQYASPPVWTEKLRSRLAARLGENIWRVHLLPPVDSWDYFAMLGVADVVLDPFPVGNLYAAVDAFALGTPVVTLPSRQRAGARYVQALASDLGLPASCCAAATLSHYVDLAARLCLDEEWADEVSDIL-YAVREWVYLTPEAPREKPHKRGPPQPPPDQLFGGDHSQRARQGCGGADGGDPPRAVRRGGRCSAWARGRRHLQEWAGFLWRVSRPGVPAEFSVD----LRQEGGATR--NHYC-SAGRRSN 1546
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: UPI0013A5EF9F (glycosyltransferase family 41 protein n=1 Tax=Geomonas edaphica TaxID=2570226 RepID=UPI0013A5EF9F) HSP 1 Score: 78.6 bits (192), Expect = 5.680e-11 Identity = 57/167 (34.13%), Postives = 84/167 (50.30%), Query Frame = 1 Query: 574 LAPKGFEGGRFEQAFEKREGRVGVMFVSSRFWNHGTTKTVAGLMRLLPRDFFEVTIASWPMPADDWTEEHVMPQVDRRPVNLMQNRTASLLRMAKQRPDVVVFVDASLDAKTFLLSFGRVAPVQVALWGHAPTLGIPSIDYYAVPEALVGDAWQGKKSPTFEMDARE 1074
+AP GGR A E RVG FVS+ F++H + +MR L R++F VT S DD + VD V + N A+ + + D ++F D ++ T+ L+F R+APVQ+AL+GH T GIP++DY+ E D G S + +RE
Sbjct: 286 VAPHCVAGGRKRGAGEPA--RVG--FVSTFFYDHTVGRYFGEVMRRLSREWFHVTAIS-NFTVDDTVSASIREGVDECIV-IPNNLAAAQQAIEEAALDALIFCDIGMEPLTYFLAFARLAPVQIALYGHPVTTGIPNVDYFLSHEDCETDESPGHYSEKLLLLSRE 446
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: A0A1F3AU20_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8 TaxID=1797233 RepID=A0A1F3AU20_9PROT) HSP 1 Score: 78.6 bits (192), Expect = 5.720e-11 Identity = 62/204 (30.39%), Postives = 89/204 (43.63%), Query Frame = 1 Query: 2353 LARAADAAEVRRRHL-LPQECRLAVLPIPVYHFHPEFDEAVGMLIDRHPLIHVVVAVEETSAEESGAELEFFRHDVLQHAFPPLWTEKLRARLKRRLGDDVWRLHLLPPLDSWDYFALLGAADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARFVQALASDLELPASICAAKDVEHYVDLVARLCLDQAWAVKVAAVL 2961
L R + R H L + L + P ++ HP+ D ++ R PL VV+ E A+ WT LRAR R LG V R+ LP L ++ L DV+LDP ++ AFA+GTP++TLP+R G R A + L I A+ VE YV+ RL D+A +V+ +
Sbjct: 449 LGRPESPKRLDRAHFGLDENAHLYICPQTLFKLHPDIDAIFRAILVRDPLGQVVLI-------EGRAD----------------WTNTLRARFARSLGHTVGRVRYLPRLSHPEFLEFLRLGDVMLDPLHFSGGLTSLQAFAVGTPIITLPARYMRG-RVTYAYWKQMGLDDGIAAS--VEDYVNKAVRLGTDRAERSRVSKAI 626
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: A0A3N5MR68_9PROT (Protein O-GlcNAc transferase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5MR68_9PROT) HSP 1 Score: 76.3 bits (186), Expect = 2.490e-10 Identity = 54/193 (27.98%), Postives = 89/193 (46.11%), Query Frame = 1 Query: 2359 RAADAAEVRRRHLLPQECRLAVLPIPVYHFHPEFDEAVGMLIDRHPLIHVVVAVEETSAEESGAELEFFRHDVLQHAFPPLWTEKLRARLKRRLGDDVWRLHLLPPLDSWDYFALLGAADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARFVQALASDLELPASICAAKDVEHYVDLVARLCLDQAW 2937
R D+ + R + LP + L + P ++ FHP+FD +G ++ P +V +++ FP W E LR R R L D + R+ LP D+ LL DV+LD ++ +++AFA GTPVVTLP+ + G A ++ C A+D + YV + ++ D ++
Sbjct: 357 RLPDSLKKREAYGLPADAHLYICPQTLFKFHPDFDAMLGNILRADPDGRLV---------------------LIEGKFPH-WGELLRQRFARTLPDVLGRVLWLPVQKGDDFINLLAVCDVMLDTPHFNGMNTSLEAFAAGTPVVTLPTLLQRGRHTFGMYA---KMGIDDCIARDPQDYVKIAVQIGTDPSF 524
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: UPI0019B449F4 (Tetratricopeptide repeat protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019B449F4) HSP 1 Score: 76.3 bits (186), Expect = 3.230e-10 Identity = 56/192 (29.17%), Postives = 88/192 (45.83%), Query Frame = 1 Query: 2359 RAADAAEVRRRHLLPQECRLAVLPIPVYHFHPEFDEAVGMLIDRHPLIHVVVAVEETSAEESGAELEFFRHDVLQHAFPPLWTEKLRARLKRRLGDDVWRLHLLPPLDSWDYFALLGAADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARFVQALASDLELPASICAAKDVEHYVDLVARLCLDQA 2934
R A+ RR+ +P E L + P ++ HP+FD +G ++ P V VL P W + LRAR + + D R+ + L+ D+ LL ADVVLD ++ +++AFA+GTP+VTLP + G R + + + +I A D + YV L +L D+A
Sbjct: 495 RLQQPAKGRRQLGVPVEGHLYLCPQTLFKLHPDFDVILGGILRADPSGRV----------------------VLLEGKHPQWADLLRARFAQSIPDVAGRVSFIAQLNPADFVNLLAVADVVLDTPHFNGMNTSLEAFAMGTPIVTLPGNYQRG-RHTFGMYRRMGIDEAIAA--DAQDYVRLAVKLGTDRA 661
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: A0A1F4HF00_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_66_14 TaxID=1797502 RepID=A0A1F4HF00_9PROT) HSP 1 Score: 74.7 bits (182), Expect = 8.420e-10 Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 622 KREGRVGVMFVSSRFWNHGTTKTVAGLMRLLPRDFFEVTIASWPMPADDWTEEHVMPQVDRR---PVNLMQNRTASLLRMAKQRPDVVVFVDASLDAKTFLLSFGRVAPVQVALWGHAPTLGIPSIDYYAVPEAL 1017
++ RVG FVS+ F H +T G +R LPR+ FEV + S +D E + D P L R+A L D +VF D + T+ L++ R+APVQ+A WGH T GI +IDY+ ++L
Sbjct: 266 RKRRRVG--FVSTYFQQHSIARTTVGWIRDLPREHFEVYVVSIAPGVNDPRAEEIRRAADHYLAVPATLGAARSALLAAEL----DYLVFADIGMHPLTYYLAYCRLAPVQLAAWGHPVTTGIDTIDYFISAQSL 394
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: A0A5C1MB47_9DELT (Glyco_transf_41 domain-containing protein n=1 Tax=Geobacter sp. FeAm09 TaxID=2597769 RepID=A0A5C1MB47_9DELT) HSP 1 Score: 73.9 bits (180), Expect = 1.370e-9 Identity = 53/180 (29.44%), Postives = 79/180 (43.89%), Query Frame = 1 Query: 2398 LPQECRLAVLPIPVYHFHPEFDEAVGMLIDRHPLIHVVVAVEETSAEESGAELEFFRHDVLQHAFPPLWTEKLRARLKRRLGDDVWRLHLLPPLDSWDYFALLGAADVVLDPFPVGNLHAAVDAFALGTPVVTLPSRQRAGARFVQALASDLELPASICAAKDVEHYVDLVARLCLDQAW 2937
LP + + P +Y HPEFD V ++ P H+V F + + +H LR RL R + D R+ +P + DY L+ +DV+LDP G +++ +AFA+G P+VTLPS G R A + C A YV + RL D+A+
Sbjct: 381 LPADGHVYACPQSIYKIHPEFDAIVAGILAGDPKGHIV----------------FIQGSIPEH------EHLLRQRLARLIPDQDERIIFVPRMGEEDYLNLIAVSDVLLDPIHFGGGNSSAEAFAVGVPIVTLPSPYLRG-RLTYAWYRRMGF--MDCVADSPREYVSIAVRLGTDEAY 535
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: A0A482SEZ7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEZ7_9ARCH) HSP 1 Score: 72.0 bits (175), Expect = 6.560e-9 Identity = 98/352 (27.84%), Postives = 145/352 (41.19%), Query Frame = 1 Query: 1 KISFMLGRELDKRGLEKESWDYLSNAAVPWTRQARYLRAALSVPAVPSSQQDLDLAMSSLEVAVERLLPTADATRQGGRGRQDETRPLSACFYGGLNYPDVALDHLPLLAFSDYRFRRKRHGFRRSDERLGGDLRDGADLGNDRIGTRAGAGRDNDGVSPYG---VIARLFSRLCPDLGSFVSPGLEAFAGRGGLAPKGFEGGRFEQAFEKREGRVGVMFVSSRFWNHGTTKTVAGLMRLLP----RDFFEVTIASWPMP-ADDWTEEHVMPQVDRRPVNLM-QNRTASLLRMAKQRPDVVVFVDASLDAKTFLLSFGRVAPVQVALWGHAPTLGIPSIDYYAVPEALVGDA 1029
K+ F LG L K GL S ++ AA PW LRA L V SS L +A+++ E VE +L A G S C LN +AL LPLL +G + G+ + G P V++ +++RLCP + ++ + G+ K F + + R+GV+ S + K + GL+ L R ++ S P A + ++ D VNL+ NRT SL R+ + D++VF DAS DA+ F L+ R+A Q LW +LGIPS+DYY +P V +A
Sbjct: 165 KLRFRLGIGLTKLGLYDLSLRHVGLAATPWESPLYRLRAKLVFSPVHSSIGALAMAVNNFERQVETILL---APPPWGLH--------SIC--QSLNEGALALQALPLLHV---------------------------------VGLSSPIGKASLGHLPVPLPVVLSEVYARLCPP--DNLLDDMKQYDHMRGVQNK--------MEFGRSKIRIGVVAGSL---DGAAGKIMIGLLESLAGSKERIKGQIEFVSMCFPTARSAITDKLLNLFDSN-VNLIPDNRTLSLERIRVKSLDLIVFADASSDARVFALAHERLARYQAVLWNWGGSLGIPSVDYYLLPVIFVREA 456
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Match: UPI0005697575 (hypothetical protein n=1 Tax=Methylomicrobium lacus TaxID=136992 RepID=UPI0005697575) HSP 1 Score: 69.7 bits (169), Expect = 8.840e-9 Identity = 54/194 (27.84%), Postives = 90/194 (46.39%), Query Frame = 1 Query: 2383 RRRHLLPQECRLAVLPIPVYHFHPEFDEAVGMLIDRHPLIHVVVAVEETSAEESGAELEFFRHDVLQHAFPPLWTEKLRARLKRRLGDDVWRLHLLPPLDSWDYFALLGAADVVLDPFPVGNLHAAVDAFALGTPVVTLPS---RQRAGARFVQALASDLELPASICAAKDVEHYVDLVARLCLDQAWAVKVAA 2955
R + L E L + P +Y HP FD + ++ PL ++V+ E+S A + E LR R + + D R+ LPP ++ DY L+ +D +LD ++++++AFA+GTP+VTLP R R GA + + S C A++ Y+ + RL D + +V+A
Sbjct: 107 RTEYGLSNEKHLYICPQTLYKLHPSFDHILANILRSDPLGNIVLL------EDSVAN----------------FAELLRQRFQVSMPDVADRVIFLPPQNTVDYINLIAVSDAMLDIPSFNGMNSSLEAFAVGTPIVTLPGELQRTRHGAGMYRRMGF------SDCIAENTLDYIKIALRLANDLLFRREVSA 272 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9920.24037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9920.24037.1 >prot_P-canaliculata_contig9920.24037.1 ID=prot_P-canaliculata_contig9920.24037.1|Name=mRNA_P-canaliculata_contig9920.24037.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=1068bp MLGRELDKRGLEKESWDYLSNAAVPWTRQARYLRAALSVPAVPSSQQDLDback to top mRNA from alignment at P-canaliculata_contig9920:1494..11722- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9920.24037.1 ID=mRNA_P-canaliculata_contig9920.24037.1|Name=mRNA_P-canaliculata_contig9920.24037.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=10229bp|location=Sequence derived from alignment at P-canaliculata_contig9920:1494..11722- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9920:1494..11722- >mRNA_P-canaliculata_contig9920.24037.1 ID=mRNA_P-canaliculata_contig9920.24037.1|Name=mRNA_P-canaliculata_contig9920.24037.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=6408bp|location=Sequence derived from alignment at P-canaliculata_contig9920:1494..11722- (Pelvetia canaliculata dioecious)back to top |