Homology
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
UPI001184779B (DUF308 domain-containing protein n=1 Tax=Pleionea sediminis TaxID=2569479 RepID=UPI001184779B)
HSP 1 Score: 69.7 bits (169), Expect = 4.920e-14
Identity = 35/65 (53.85%), Postives = 52/65 (80.00%), Query Frame = 1
Query: 7 KKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKK 201
KK L+T G+ LLL+G +F+ILPGP LI+ LAL +L++EYP+A+KWL + QK+MK+ + WAD++
Sbjct: 5 KKALVTATGLLLLLIGVVFIILPGPAVLIIPLALGVLAIEYPIAKKWLRVFQKKMKQSAEWADRR 69
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
A0KY34_SHESA (Uncharacterized protein n=7 Tax=Shewanella TaxID=22 RepID=A0KY34_SHESA)
HSP 1 Score: 61.2 bits (147), Expect = 1.420e-10
Identity = 31/72 (43.06%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 4 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLADRKR 219
M + +IT +G L+G IFL+LPGPG L +++ LTLLS +YP A++WL ++Q+++ K +AW D ++ +R
Sbjct: 17 MTRTVITVIGACFTLVGGIFLLLPGPGLLFILIGLTLLSTQYPWAKRWLRLSQRQLTKSAAWLDNQIRRHRR 88
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
Q0HU62_SHESR (Integral membrane protein TerC n=2 Tax=unclassified Shewanella TaxID=196818 RepID=Q0HU62_SHESR)
HSP 1 Score: 59.7 bits (143), Expect = 5.730e-10
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 19 ITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKL 204
IT +G L+G IFL+LPGPG L +++ LTLLS +YP A++WL ++Q+++ K +AW D ++
Sbjct: 22 ITVLGACFTLIGGIFLLLPGPGLLFILIGLTLLSTQYPWAKRWLRLSQRQLSKSAAWLDNQI 83
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
A0A316G2W2_9GAMM (Uncharacterized protein (TIGR02611 family) n=1 Tax=Pleionea mediterranea TaxID=523701 RepID=A0A316G2W2_9GAMM)
HSP 1 Score: 59.3 bits (142), Expect = 6.210e-10
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 7 KKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKK 201
KK L+T +G +LL+G +F++LPGP LI+ L L LL+ EYP+A KWL Q+++ + WAD K
Sbjct: 5 KKTLVTLIGTLILLVGVVFIVLPGPAVLIIPLGLALLATEYPIAEKWLRRFQRQLSSSAKWADAK 69
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
A0A2D6RDX3_9GAMM (Tellurium resistance protein TerC n=1 Tax=Colwelliaceae bacterium TaxID=2026726 RepID=A0A2D6RDX3_9GAMM)
HSP 1 Score: 58.2 bits (139), Expect = 1.770e-9
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 TMKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLADRKR 219
+M+K+LIT VG L +G +F+++PGP FL L + L +LS+EYPLA+KWL Q+ M+K + D+ L KR
Sbjct: 4 SMRKILITLVGGLLAFMGLVFVLVPGPAFLFLPVGLAILSLEYPLAKKWLKKCQRWMRKGAEQTDRMLGKLKR 76
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
UPI00048DFBE4 (PGPGW domain-containing protein n=1 Tax=Shewanella TaxID=22 RepID=UPI00048DFBE4)
HSP 1 Score: 57.4 bits (137), Expect = 3.230e-9
Identity = 28/67 (41.79%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 4 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKL 204
++K ++T +G LG +F++LPGP +L+L + L +LS+EYP A+++L I+Q++M + +AW DKK+
Sbjct: 2 LRKTMVTIIGGLTTALGVVFILLPGPAWLLLPIGLAILSLEYPWAKRYLRISQRKMSQSAAWMDKKI 68
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
A0A7G5HZT8_9GAMM (Uncharacterized protein n=2 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A7G5HZT8_9GAMM)
HSP 1 Score: 56.2 bits (134), Expect = 8.380e-9
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 4 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLA 207
MKK+L+ +GI +LLG IF+I+PGP L I+ L S YPLAR++L QK + K A+ DKKLA
Sbjct: 1 MKKILLVSLGILSMLLGLIFVIVPGPSLLFFIVGLLCFSFYYPLARRYLVYCQKALTKSCAYLDKKLA 68
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
A0A6N8FEE9_9GAMM (Tellurium resistance protein TerC n=2 Tax=Psychrosphaera haliotis TaxID=555083 RepID=A0A6N8FEE9_9GAMM)
HSP 1 Score: 54.7 bits (130), Expect = 3.820e-8
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 4 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLADRK 216
+K+L I VG +L+L+G IF+++PGP L+LI L +LS EY +AR WL Q +KK + W D K+ RK
Sbjct: 2 LKQLFIHLVGGSLVLMGLIFIVVPGPSLLLLIPGLYILSFEYEIARVWLKKCQLMLKKSANWIDSKIRARK 72
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
UPI001FD0B3E1 (PGPGW domain-containing protein n=1 Tax=Psychrosphaera aestuarii TaxID=1266052 RepID=UPI001FD0B3E1)
HSP 1 Score: 53.9 bits (128), Expect = 8.240e-8
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 4 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLTITQKRMKKVSAWADKKLADRK 216
+K+L I VG L+LLG IF+++PGP L+LI L +LS EY +AR WL Q +KK + W D K+ R+
Sbjct: 4 LKQLFIHLVGGTLVLLGLIFIVVPGPSLLLLIPGLYILSFEYEIARVWLRKCQVMLKKSANWLDNKIRARR 74
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Match:
UPI001C085687 (tellurium resistance protein TerC n=2 Tax=Pseudoalteromonas TaxID=53246 RepID=UPI001C085687)
HSP 1 Score: 53.1 bits (126), Expect = 1.510e-7
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 4 MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWL 150
MKK+ IT VG LLL+G +F+ILPGP +++ LAL LLS EYP+A++WL
Sbjct: 4 MKKIAITLVGGFLLLIGLLFIILPGPAIIVIPLALVLLSKEYPIAKQWL 52
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99150.24031.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 21
0 1 Expect = 4.92e-14 / Id = 53.85 Expect = 1.42e-10 / Id = 43.06 Expect = 5.73e-10 / Id = 46.77 Expect = 6.21e-10 / Id = 47.69 Expect = 1.77e-9 / Id = 46.58 Expect = 3.23e-9 / Id = 41.79 Expect = 8.38e-9 / Id = 50.00 Expect = 3.82e-8 / Id = 46.48 Expect = 8.24e-8 / Id = 46.48 Expect = 1.51e-7 / Id = 59.18 Sequence UPI001184779B A0KY34_SHESA Q0HU62_SHESR A0A316G2W2_9GAMM A0A2D6RDX3_9GAMM UPI00048DFBE4 A0A7G5HZT8_9GAMM A0A6N8FEE9_9GAMM UPI001FD0B3E1 UPI001C085687 Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99150.24031.1
>prot_P-canaliculata_contig99150.24031.1 ID=prot_P-canaliculata_contig99150.24031.1|Name=mRNA_P-canaliculata_contig99150.24031.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=78bp
MKKLLITCVGIALLLLGCIFLILPGPGFLILILALTLLSMEYPLARKWLT back to top mRNA from alignment at P-canaliculata_contig99150:323..559-
Legend: UTR CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig99150.24031.1 ID=mRNA_P-canaliculata_contig99150.24031.1|Name=mRNA_P-canaliculata_contig99150.24031.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=237bp|location=Sequence derived from alignment at P-canaliculata_contig99150:323..559- (Pelvetia canaliculata dioecious)ACA ATGAAAAAACTACTTATCACCTGTGTGGGCATTGCTCTATTATTACT
GGGTTGTATTTTTCTTATTCTACCAGGCCCTGGTTTTTTAATTTTAATTC
TCGCTTTAACTTTGCTTAGTATGGAATACCCTTTAGCTAGAAAATGGTTA
ACCATCACTCAAAAACGAATGAAGAAAGTATCGGCTTGGGCTGATAAAAA
ACTAGCGGATCGAAAAAGAGCCAAATACGAATTTTAA back to top Coding sequence (CDS) from alignment at P-canaliculata_contig99150:323..559-
>mRNA_P-canaliculata_contig99150.24031.1 ID=mRNA_P-canaliculata_contig99150.24031.1|Name=mRNA_P-canaliculata_contig99150.24031.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=468bp|location=Sequence derived from alignment at P-canaliculata_contig99150:323..559- (Pelvetia canaliculata dioecious) back to top