Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 897 |
| Cds size | 897 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817352.2366765-CDS-P-canaliculata_contig99079:2..899 | 1622817352.2366765-CDS-P-canaliculata_contig99079:2..899 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99079 3..899 - |
| 1693495241.4218698-CDS-P-canaliculata_contig99079:2..899 | 1693495241.4218698-CDS-P-canaliculata_contig99079:2..899 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99079 3..899 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99079.24027.1 >prot_P-canaliculata_contig99079.24027.1 ID=prot_P-canaliculata_contig99079.24027.1|Name=mRNA_P-canaliculata_contig99079.24027.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=299bp
KPCDVATLEIDIVAPEQSHSVTVSSQRRKEPIAASVAEVYQSKLKSNDLI
VEIIAPVEETTSTTELVYLSTTTAATEGHEPVKITAKAKPASSCGPTHPA
LSAIGGDVNEKSERIPLNFEVLTPPPTGIKSTSFGRIWPFGKSDNWSQEI
AVKADSCGILPGGQPNKDLSILLVSKPDESFKITLGLGTYYSAKKTTETI
HDTGPDKKSRGKLVTYKEQSGNKTETRKHIEVADTRFSSVYTSTETTGMV
VRESKTSTTDYMGNLPPTHDKWDRSLGQPNTDDKNELRRIKIERTVGGQ back to topmRNA from alignment at P-canaliculata_contig99079:3..899- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig99079.24027.1 ID=mRNA_P-canaliculata_contig99079.24027.1|Name=mRNA_P-canaliculata_contig99079.24027.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=897bp|location=Sequence derived from alignment at P-canaliculata_contig99079:3..899- (Pelvetia canaliculata dioecious)
AAGCCCTGCGATGTTGCGACCTTAGAAATTGATATTGTCGCCCCGGAACA
GTCACATAGTGTCACTGTATCGTCACAACGCCGGAAAGAGCCCATCGCGG
CCAGTGTGGCGGAGGTTTATCAATCCAAACTAAAATCTAACGATCTAATC
GTAGAAATCATCGCGCCTGTTGAGGAGACAACATCGACAACCGAGTTAGT
CTACTTGAGTACGACGACTGCAGCGACTGAAGGACATGAGCCTGTAAAAA
TCACGGCGAAAGCTAAGCCTGCCTCTAGCTGTGGCCCGACCCATCCGGCC
CTATCCGCAATTGGTGGAGATGTGAACGAAAAATCCGAACGCATACCTTT
AAATTTCGAAGTCCTCACACCCCCACCAACGGGGATCAAATCAACTAGTT
TTGGGCGGATTTGGCCTTTTGGAAAATCAGATAACTGGTCTCAAGAAATT
GCGGTCAAGGCAGACAGCTGTGGCATATTACCCGGCGGTCAACCCAACAA
AGACCTATCAATCCTCTTAGTCTCTAAACCTGATGAGAGCTTCAAAATAA
CACTTGGTTTAGGAACATACTATTCTGCAAAGAAAACAACAGAGACGATT
CACGATACCGGTCCGGATAAGAAAAGCAGAGGAAAGCTGGTCACTTATAA
AGAACAATCGGGAAACAAGACAGAGACCCGAAAGCATATAGAAGTAGCGG
ATACGCGGTTCAGCAGCGTATACACATCAACTGAGACAACTGGAATGGTT
GTCAGAGAAAGTAAAACTTCTACTACCGACTACATGGGAAATCTCCCCCC
TACCCATGACAAATGGGACCGGTCCCTCGGACAGCCAAACACTGACGATA
AAAACGAGCTACGTAGGATAAAGATTGAACGCACCGTGGGCGGGCAA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig99079:3..899- >mRNA_P-canaliculata_contig99079.24027.1 ID=mRNA_P-canaliculata_contig99079.24027.1|Name=mRNA_P-canaliculata_contig99079.24027.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1794bp|location=Sequence derived from alignment at P-canaliculata_contig99079:3..899- (Pelvetia canaliculata dioecious)
AAGCCCTGCGATGTTGCGACCTTAGAAATTGATATTGTCGCCCCGGAACA
GTCACATAGTGTCACTGTATCGTCACAACGCCGGAAAGAGCCCATCGCGG
CCAGTGTGGCGGAGGTTTATCAATCCAAACTAAAATCTAACGATCTAATC
GTAGAAATCATCGCGCCTGTTGAGGAGACAACATCGACAACCGAGTTAGT
CTACTTGAGTACGACGACTGCAGCGACTGAAGGACATGAGCCTGTAAAAA
TCACGGCGAAAGCTAAGCCTGCCTCTAGCTGTGGCCCGACCCATCCGGCC
CTATCCGCAATTGGTGGAGATGTGAACGAAAAATCCGAACGCATACCTTT
AAATTTCGAAGTCCTCACACCCCCACCAACGGGGATCAAATCAACTAGTT
TTGGGCGGATTTGGCCTTTTGGAAAATCAGATAACTGGTCTCAAGAAATT
GCGGTCAAGGCAGACAGCTGTGGCATATTACCCGGCGGTCAACCCAACAA
AGACCTATCAATCCTCTTAGTCTCTAAACCTGATGAGAGCTTCAAAATAA
CACTTGGTTTAGGAACATACTATTCTGCAAAGAAAACAACAGAGACGATT
CACGATACCGGTCCGGATAAGAAAAGCAGAGGAAAGCTGGTCACTTATAA
AGAACAATCGGGAAACAAGACAGAGACCCGAAAGCATATAGAAGTAGCGG
ATACGCGGTTCAGCAGCGTATACACATCAACTGAGACAACTGGAATGGTT
GTCAGAGAAAGTAAAACTTCTACTACCGACTACATGGGAAATCTCCCCCC
TACCCATGACAAATGGGACCGGTCCCTCGGACAGCCAAACACTGACGATA
AAAACGAGCTACGTAGGATAAAGATTGAACGCACCGTGGGCGGGCAAAAG
CCCTGCGATGTTGCGACCTTAGAAATTGATATTGTCGCCCCGGAACAGTC
ACATAGTGTCACTGTATCGTCACAACGCCGGAAAGAGCCCATCGCGGCCA
GTGTGGCGGAGGTTTATCAATCCAAACTAAAATCTAACGATCTAATCGTA
GAAATCATCGCGCCTGTTGAGGAGACAACATCGACAACCGAGTTAGTCTA
CTTGAGTACGACGACTGCAGCGACTGAAGGACATGAGCCTGTAAAAATCA
CGGCGAAAGCTAAGCCTGCCTCTAGCTGTGGCCCGACCCATCCGGCCCTA
TCCGCAATTGGTGGAGATGTGAACGAAAAATCCGAACGCATACCTTTAAA
TTTCGAAGTCCTCACACCCCCACCAACGGGGATCAAATCAACTAGTTTTG
GGCGGATTTGGCCTTTTGGAAAATCAGATAACTGGTCTCAAGAAATTGCG
GTCAAGGCAGACAGCTGTGGCATATTACCCGGCGGTCAACCCAACAAAGA
CCTATCAATCCTCTTAGTCTCTAAACCTGATGAGAGCTTCAAAATAACAC
TTGGTTTAGGAACATACTATTCTGCAAAGAAAACAACAGAGACGATTCAC
GATACCGGTCCGGATAAGAAAAGCAGAGGAAAGCTGGTCACTTATAAAGA
ACAATCGGGAAACAAGACAGAGACCCGAAAGCATATAGAAGTAGCGGATA
CGCGGTTCAGCAGCGTATACACATCAACTGAGACAACTGGAATGGTTGTC
AGAGAAAGTAAAACTTCTACTACCGACTACATGGGAAATCTCCCCCCTAC
CCATGACAAATGGGACCGGTCCCTCGGACAGCCAAACACTGACGATAAAA
ACGAGCTACGTAGGATAAAGATTGAACGCACCGTGGGCGGGCAA back to top
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