Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 505 |
| Cds size | 501 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817351.970915-CDS-P-canaliculata_contig9905:6799..6902 | 1622817351.970915-CDS-P-canaliculata_contig9905:6799..6902 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 6800..6902 - |
| 1693495241.2663305-CDS-P-canaliculata_contig9905:6799..6902 | 1693495241.2663305-CDS-P-canaliculata_contig9905:6799..6902 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 6800..6902 - |
| 1622817351.982423-CDS-P-canaliculata_contig9905:7295..7420 | 1622817351.982423-CDS-P-canaliculata_contig9905:7295..7420 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 7296..7420 - |
| 1693495241.2774792-CDS-P-canaliculata_contig9905:7295..7420 | 1693495241.2774792-CDS-P-canaliculata_contig9905:7295..7420 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 7296..7420 - |
| 1622817351.9956367-CDS-P-canaliculata_contig9905:7789..8062 | 1622817351.9956367-CDS-P-canaliculata_contig9905:7789..8062 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 7790..8062 - |
| 1693495241.2870734-CDS-P-canaliculata_contig9905:7789..8062 | 1693495241.2870734-CDS-P-canaliculata_contig9905:7789..8062 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9905 7790..8062 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9905.24024.1 >prot_P-canaliculata_contig9905.24024.1 ID=prot_P-canaliculata_contig9905.24024.1|Name=mRNA_P-canaliculata_contig9905.24024.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=167bp
PSPEGKTGRLSPFWANFILRMVGWYSAMVLDARILTEFHAGGGGMESVEG
GESLSPSAVVTTEVFVSSFEACTKQLDDGSGGVKLVVRVVQDADHVMVYP
STDSPGGSATFQGAVSLEVEVVPLRGKRLPAYSPALMLRSASVSSGAPWR
AVVGERDIEAFATLLPA back to topmRNA from alignment at P-canaliculata_contig9905:6798..8062- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig9905.24024.1 ID=mRNA_P-canaliculata_contig9905.24024.1|Name=mRNA_P-canaliculata_contig9905.24024.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1265bp|location=Sequence derived from alignment at P-canaliculata_contig9905:6798..8062- (Pelvetia canaliculata dioecious)
CCATCGCCCGAGGGCAAAACGGGACGCCTGTCTCCATTCTGGGCAAATTT
TATCTTAAGGATGGTCGGCTGGTACAGCGCCATGGTGTTGGACGCTCGAA
TCTTGACGGAGTTTCACGCAGGAGGCGGCGGAATGGAGTCAGTAGAGGGG
GGGGAATCACTGTCGCCATCAGCTGTCGTAACGACCGAAGTTTTCGTGTC
GTCTTTCGAGGCATGCACCAAGCAACTAGATGACGGATCCGGCGGGGTCA
AGCTTGTGGTGCGCGTGGTCCAGGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGCGTGCATGGGTTCGCACGTGGTCGTGGTTCAGTGAAACGAAATCGAGC
GTCGGCGGGACTTTCTCTACGAACGTAACAAGACGCATCCTAATCTCTTC
TGGCCACGAGTAACACACAACAGGGAAAATTATGTGATGTGGGTTTATAG
ACAGCATCTAGAAACATTTTGTCGATTTTTTGCTACTCCATTCAACAAGA
CTTTAAAATAATTTTGTCCGATCATTGCTTGTTAAAATTCCTGCAGAGTG
TGAAACAGTTGATCATCCCGGCAGGACGACGATGAACACGAATACAACGG
CCTCCCACTCTCCCACTCTCCCGCTGTGTCTCTTTCCCCCAGGACGCTGA
CCATGTAATGGTCTACCCTTCTACCGACTCGCCTGGCGGCAGTGCGACCT
TCCAGGGGGCCGTCTCCCTCGAGGTTGAAGTGGTTCCGCTCAGGGGAAAA
CGCCTTCCCGCTTATAGGTACTCTTTTCTGTAATATTTGTGGTTTTCTAA
CCACACGGAAAAGCGCTAGCTCTAGCCCCTCCCGCCAATGTGTACTCGAA
AACAGCCCTTTCGCCGTTCCACGGAAAACCGACTTAGAAATAAGCGGAAC
ACACACGTTGTGTCTGTACAAGAGAGAGGGATCAGTTGAATGCGGACGGG
TTGATGACGCAGGGGAAACCGTGCCTGGGCGGGTTATCACGAGGAATCAG
AGCAGCATCGTTATAGATTTATGGGTTGCGTGTTTTTATCGCCTATCTTC
TTTTTCTTTTCTAATGTTGAAACTATGTAGATATGTGTGTAAGCTCATTC
CCCTAAATTGTGCGCACTTGATCGTGATTCTCCCGATGCTATTCGGATGG
ACGTTCCTAGCCCGGCCTTGATGCTACGCTCGGCGAGCGTCTCCTCCGGC
GCTCCCTGGCGAGCCGTCGTCGGCGAGCGAGATATCGAAGCCTTCGCGAC
CCTCTTACCCGCCCC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig9905:6798..8062- >mRNA_P-canaliculata_contig9905.24024.1 ID=mRNA_P-canaliculata_contig9905.24024.1|Name=mRNA_P-canaliculata_contig9905.24024.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at P-canaliculata_contig9905:6798..8062- (Pelvetia canaliculata dioecious)
CCATCGCCCGAGGGCAAAACGGGACGCCTGTCTCCATTCTGGGCAAATTT
TATCTTAAGGATGGTCGGCTGGTACAGCGCCATGGTGTTGGACGCTCGAA
TCTTGACGGAGTTTCACGCAGGAGGCGGCGGAATGGAGTCAGTAGAGGGG
GGGGAATCACTGTCGCCATCAGCTGTCGTAACGACCGAAGTTTTCGTGTC
GTCTTTCGAGGCATGCACCAAGCAACTAGATGACGGATCCGGCGGGGTCA
AGCTTGTGGTGCGCGTGGTCCAGCCATCGCCCGAGGGCAAAACGGGACGC
CTGTCTCCATTCTGGGCAAATTTTATCTTAAGGATGGTCGGCTGGTACAG
CGCCATGGTGTTGGACGCTCGAATCTTGACGGAGTTTCACGCAGGAGGCG
GCGGAATGGAGTCAGTAGAGGGGGGGGAATCACTGTCGCCATCAGCTGTC
GTAACGACCGAAGTTTTCGTGTCGTCTTTCGAGGCATGCACCAAGCAACT
AGATGACGGATCCGGCGGGGTCAAGCTTGTGGTGCGCGTGGTCCAGGACG
CTGACCATGTAATGGTCTACCCTTCTACCGACTCGCCTGGCGGCAGTGCG
ACCTTCCAGGGGGCCGTCTCCCTCGAGGTTGAAGTGGTTCCGCTCAGGGG
AAAACGCCTTCCCGCTTATAGGACGCTGACCATGTAATGGTCTACCCTTC
TACCGACTCGCCTGGCGGCAGTGCGACCTTCCAGGGGGCCGTCTCCCTCG
AGGTTGAAGTGGTTCCGCTCAGGGGAAAACGCCTTCCCGCTTATAGCCCG
GCCTTGATGCTACGCTCGGCGAGCGTCTCCTCCGGCGCTCCCTGGCGAGC
CGTCGTCGGCGAGCGAGATATCGAAGCCTTCGCGACCCTCTTACCCGCCC
CCGGCCTTGATGCTACGCTCGGCGAGCGTCTCCTCCGGCGCTCCCTGGCG
AGCCGTCGTCGGCGAGCGAGATATCGAAGCCTTCGCGACCCTCTTACCCG
CC back to top
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