Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 315 |
Cds size | 306 |
Stop | 0 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817351.061347-CDS-P-canaliculata_contig98970:504..810 | 1622817351.061347-CDS-P-canaliculata_contig98970:504..810 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig98970 505..810 - |
1693495240.6431253-CDS-P-canaliculata_contig98970:504..810 | 1693495240.6431253-CDS-P-canaliculata_contig98970:504..810 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig98970 505..810 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817351.0777867-UTR-P-canaliculata_contig98970:810..819 | 1622817351.0777867-UTR-P-canaliculata_contig98970:810..819 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig98970 811..819 - |
1693495240.6563497-UTR-P-canaliculata_contig98970:810..819 | 1693495240.6563497-UTR-P-canaliculata_contig98970:810..819 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig98970 811..819 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig98970.24012.1 >prot_P-canaliculata_contig98970.24012.1 ID=prot_P-canaliculata_contig98970.24012.1|Name=mRNA_P-canaliculata_contig98970.24012.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=102bp
MMVRAKNEKLYVDQLDPKGNAATAGVRTGDQLVAGGGVDFESVADFNGIA EVLEDGDQLEFVVKRGGGKKEMLIVYGKATADQAGGMLEGSFESNSAAQK TS back to topmRNA from alignment at P-canaliculata_contig98970:505..819- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig98970.24012.1 ID=mRNA_P-canaliculata_contig98970.24012.1|Name=mRNA_P-canaliculata_contig98970.24012.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=315bp|location=Sequence derived from alignment at P-canaliculata_contig98970:505..819- (Pelvetia canaliculata dioecious) GGTTTTGGGATGATGGTCAGAGCGAAAAATGAAAAGCTGTACGTAGACCA
GCTTGACCCCAAAGGAAACGCCGCCACAGCAGGTGTGCGGACTGGCGATC
AACTCGTTGCTGGCGGTGGAGTCGATTTTGAATCGGTTGCCGACTTTAAC
GGCATCGCAGAAGTTCTCGAAGACGGCGACCAGCTGGAGTTTGTGGTTAA
ACGTGGCGGTGGCAAAAAAGAAATGCTGATCGTTTACGGCAAAGCCACAG
CAGATCAAGCTGGCGGGATGCTTGAGGGAAGCTTTGAGTCGAATAGCGCA
GCTCAAAAGACCTCC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig98970:505..819- >mRNA_P-canaliculata_contig98970.24012.1 ID=mRNA_P-canaliculata_contig98970.24012.1|Name=mRNA_P-canaliculata_contig98970.24012.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=612bp|location=Sequence derived from alignment at P-canaliculata_contig98970:505..819- (Pelvetia canaliculata dioecious) ATGATGGTCAGAGCGAAAAATGAAAAGCTGTACGTAGACCAGCTTGACCC CAAAGGAAACGCCGCCACAGCAGGTGTGCGGACTGGCGATCAACTCGTTG CTGGCGGTGGAGTCGATTTTGAATCGGTTGCCGACTTTAACGGCATCGCA GAAGTTCTCGAAGACGGCGACCAGCTGGAGTTTGTGGTTAAACGTGGCGG TGGCAAAAAAGAAATGCTGATCGTTTACGGCAAAGCCACAGCAGATCAAG CTGGCGGGATGCTTGAGGGAAGCTTTGAGTCGAATAGCGCAGCTCAAAAG ACCTCCATGATGGTCAGAGCGAAAAATGAAAAGCTGTACGTAGACCAGCT TGACCCCAAAGGAAACGCCGCCACAGCAGGTGTGCGGACTGGCGATCAAC TCGTTGCTGGCGGTGGAGTCGATTTTGAATCGGTTGCCGACTTTAACGGC ATCGCAGAAGTTCTCGAAGACGGCGACCAGCTGGAGTTTGTGGTTAAACG TGGCGGTGGCAAAAAAGAAATGCTGATCGTTTACGGCAAAGCCACAGCAG ATCAAGCTGGCGGGATGCTTGAGGGAAGCTTTGAGTCGAATAGCGCAGCT CAAAAGACCTCC back to top
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