Homology
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
A0A7Y9U7S9_9BURK (Two-component system response regulator BaeR n=1 Tax=Sphaerotilus montanus TaxID=522889 RepID=A0A7Y9U7S9_9BURK)
HSP 1 Score: 249 bits (636), Expect = 5.010e-81
Identity = 125/194 (64.43%), Postives = 154/194 (79.38%), Query Frame = 1
Query: 1 MKSSRKILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQL--KTSLWKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
M S R++LVVEDD +IA +LLDYLR EGF+A +++DG A+ V PP ++ILDLNLPGLDG+ +C+AVR+FSD+PILM+TARIDE DRLLGL+SGADDYVCKPFSP EVMARV+A +RR +G++ SLW +DDA I W+ Q L LT +EFRML LL QPGRVFSR+QLL+ H D R VSDRAID+H
Sbjct: 1 MTSERRVLVVEDDPRIALLLLDYLRSEGFDARTLADGHLALAEVRHAPPSLLILDLNLPGLDGVSLCRAVRQFSDVPILMVTARIDELDRLLGLNSGADDYVCKPFSPREVMARVQALLRRAEGRVTRSASLWTLDDAGLRIAWRGQWLSLTPLEFRMLRQLLSQPGRVFSRSQLLESAHGDLRDVSDRAIDTH 194
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
UPI001917AC3F (response regulator n=1 Tax=Rubrivivax sp. A210 TaxID=2772301 RepID=UPI001917AC3F)
HSP 1 Score: 238 bits (606), Expect = 1.440e-76
Identity = 119/194 (61.34%), Postives = 151/194 (77.84%), Query Frame = 1
Query: 1 MKSSRKILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQLKTSL--WKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
M ++R+ILVVEDD +I+Q+LLDYLR +G +A +++DG A+ + PP ++ILDL LPGLDG+ +C+AVR+FS +PILMLTAR+DE DRLLGL+SGADDYVCKPFSP EVMARV+A +RR +G++ + W IDDA + W+ Q L LT +EFRML LL QPGRVFSR QLLD H D R VSDRAID+H
Sbjct: 1 MNAARRILVVEDDTRISQLLLDYLRNDGHQAQALADGELALSEIRHAPPDLLILDLMLPGLDGVSLCRAVRQFSAVPILMLTARVDELDRLLGLNSGADDYVCKPFSPREVMARVQALLRRAEGRVAAAPRPWTIDDAGLRMAWRGQWLQLTPLEFRMLRQLLSQPGRVFSRAQLLDSAHGDLRDVSDRAIDTH 194
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
A0A523QB79_9BURK (Two-component system response regulator BaeR n=2 Tax=cellular organisms TaxID=131567 RepID=A0A523QB79_9BURK)
HSP 1 Score: 230 bits (586), Expect = 1.670e-73
Identity = 114/189 (60.32%), Postives = 147/189 (77.78%), Query Frame = 1
Query: 16 KILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQL--KTSLWKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
++LVVEDD +IA +L+DYLR EG +A S++DG+ A++ + P ++ILDL LPGLDG+ +C+ VR+FSD+PILMLTAR+DE DRLLGL+SGADDYVCKPFSP EVMARV+A +RR G+L + W++D+A I W+ Q L LT +EFRML +L PGRV+SR QLLD H DQR VSDRAID+H
Sbjct: 8 RVLVVEDDPRIAMLLVDYLRHEGLQAHSLADGQLALNEIRHAVPDLLILDLGLPGLDGVSLCREVRQFSDVPILMLTARVDELDRLLGLNSGADDYVCKPFSPREVMARVQALLRRAQGRLAARPLPWEVDEAGLRIAWRGQWLALTPLEFRMLRQMLNHPGRVYSRQQLLDSAHPDQREVSDRAIDTH 196
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
A0A257EAJ2_9BURK (Two-component system response regulator BaeR n=1 Tax=Comamonadaceae bacterium PBBC1 TaxID=2015580 RepID=A0A257EAJ2_9BURK)
HSP 1 Score: 228 bits (582), Expect = 5.940e-73
Identity = 114/189 (60.32%), Postives = 148/189 (78.31%), Query Frame = 1
Query: 16 KILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQLKT--SLWKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
++LVVEDD++IAQ+L+DYL EG +A +++DG A+ + ++ P ++ILD+ LPGLDG+G+C+AVR+FSD+PILM+TAR+DE DRLLGL +GADDYVCKPFSP EVMARV+A +RR G+L T + W ID+ A I W+ Q L LT +EFRML LL +PGRVFSR QLLD H D R VSDR ID+H
Sbjct: 5 RVLVVEDDLRIAQLLVDYLHNEGHQARALADGALALQDIRQSRPDLLILDVMLPGLDGVGLCRAVRQFSDVPILMVTARVDEIDRLLGLQTGADDYVCKPFSPREVMARVQALLRRSQGRLLTQQAAWHIDEEALRIAWRGQSLTLTPLEFRMLRLLLSRPGRVFSREQLLDAAHADLREVSDRTIDTH 193
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
A0A2M6VPW4_9BURK (Two-component system response regulator BaeR n=2 Tax=unclassified Limnohabitans TaxID=2626134 RepID=A0A2M6VPW4_9BURK)
HSP 1 Score: 227 bits (579), Expect = 1.870e-72
Identity = 112/194 (57.73%), Postives = 147/194 (75.77%), Query Frame = 1
Query: 1 MKSSRKILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQLKTSL--WKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
M R ILVVEDD +IAQ+LLDYL EG+ A S SDG QA+H V+R P +++LD+ LPG+DG+ +C+A+R+FSD+PI+M+TAR+DE DRLLGL++GADDYVCKPFSP EVMARV A +RR K + W+I D A I W+ Q L+LT +E+R+L + QPGRVFSR QLL+ +H + R +SDRAID+H
Sbjct: 1 MSQPRHILVVEDDARIAQLLLDYLAHEGWRASSESDGNQALHAVQRQMPDLVLLDVMLPGMDGVSLCRAIRQFSDVPIMMITARVDEVDRLLGLNTGADDYVCKPFSPREVMARVHALLRRSQSHGKAHIKPWEIQDEAMRIAWRGQSLNLTPLEYRLLRLFISQPGRVFSRAQLLEALHLELRDISDRAIDTH 194
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
A0A4V1CIE7_9BURK (Response regulator n=2 Tax=Hydrogenophaga sp. PAMC20947 TaxID=2565558 RepID=A0A4V1CIE7_9BURK)
HSP 1 Score: 223 bits (569), Expect = 8.210e-71
Identity = 111/188 (59.04%), Postives = 145/188 (77.13%), Query Frame = 1
Query: 19 ILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQL--KTSLWKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
+LVVEDD KIA++L DYL+ EG E+L ++DG A+ V P +++LD+ LPGLDG+ VC+++R FSD+PI+MLTARIDE DRLLGL++GADDYVCKPFSP EVMARV+A +RR G+L + +LW +DD + W+ L LT +EFRM LL +PGRVFSR+QLLD +H D+R VSDRA+DSH
Sbjct: 9 VLVVEDDPKIARLLQDYLKREGLESLVLADGAAALQQVTACRPSLVVLDVMLPGLDGVEVCRSIRTFSDVPIIMLTARIDELDRLLGLETGADDYVCKPFSPREVMARVQALLRRSQGRLNRQPALWVVDDEKLRVDWRGHTLGLTLLEFRMFRLLLGRPGRVFSRSQLLDTLHADERDVSDRAVDSH 196
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
A0A2T7UCH6_9BURK (DNA-binding response regulator n=1 Tax=Limnohabitans planktonicus II-D5 TaxID=1293045 RepID=A0A2T7UCH6_9BURK)
HSP 1 Score: 221 bits (564), Expect = 3.770e-70
Identity = 113/188 (60.11%), Postives = 140/188 (74.47%), Query Frame = 1
Query: 19 ILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQ--LKTSLWKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
+LVVEDD KIAQV+LDYL EG A + DG A+ + P ++ILD+ LPG+DG+ +CQ VR S++PI+MLTAR+DE DRLLGLDSGADDYV KPFSP E+MARVR +RR GQ L SLW++D+A + W+ LDLT VEFR+ S LL QPGRVFSR+QL+D +H DQR +SDR IDSH
Sbjct: 10 VLVVEDDPKIAQVVLDYLCSEGHSAQASHDGLAAMALIRERMPDLLILDVMLPGMDGLAICQEVRRLSEVPIIMLTARVDEVDRLLGLDSGADDYVTKPFSPRELMARVRNLLRRYKGQWELSQSLWQVDEAGLRVAWRRTWLDLTPVEFRIFSRLLAQPGRVFSRSQLIDGMHADQRDISDRTIDSH 197
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
A0A3N5ESD8_9BURK (Response regulator n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5ESD8_9BURK)
HSP 1 Score: 221 bits (564), Expect = 3.890e-70
Identity = 112/193 (58.03%), Postives = 144/193 (74.61%), Query Frame = 1
Query: 4 KSSRKILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQL--KTSLWKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
K+ ++VVEDD KIA++L+DYL EG A +I DG QA+ E PP M+LDL LPGLDG+ +C+AVR SD+PI+MLTAR+DE DRL+GL+ GADDYVCKPFSP EV+ARV+A +RR +G+L + W+ID+ A I W+ L LT +EFRM +L++PGRVF+R LLD VH+D R VSDRAIDSH
Sbjct: 5 KTRSAVMVVEDDPKIARLLVDYLLNEGLAATAIGDGLQALRAFEADPPSAMVLDLMLPGLDGLALCRAVRATSDVPIVMLTARVDEIDRLIGLEVGADDYVCKPFSPREVVARVKAQLRRAEGRLVRQRPAWEIDEDALRIAWRGHGLPLTPLEFRMFRLMLERPGRVFARATLLDAVHDDLRDVSDRAIDSH 197
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
A0A0N1KWI7_9PROT (Transcriptional regulator n=1 Tax=beta proteobacterium AAP65 TaxID=1523424 RepID=A0A0N1KWI7_9PROT)
HSP 1 Score: 220 bits (560), Expect = 1.380e-69
Identity = 112/189 (59.26%), Postives = 141/189 (74.60%), Query Frame = 1
Query: 16 KILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQLKT--SLWKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
++ VVEDD KIA +L+DYLR GF A SI+DG A+ + P ++ILDL LPGLDG+ +C+A+R F +P++MLTAR+DE DRLLGLD+GADDYVCKPFSP EV+ARVRA +RR Q+ + W+I+D I W QPL LT +EFR+L +LL QPGRVFSR QLLD +H D R VSDRA+DSH
Sbjct: 7 EVWVVEDDAKIAALLVDYLRHAGFVADSIADGALALERLRARQPSLLILDLMLPGLDGLALCRALRRFCAVPVIMLTARVDEVDRLLGLDTGADDYVCKPFSPPEVIARVRAQLRRARAQVVQGDAAWRINDETLCIAWGTQPLPLTPLEFRLLRTLLLQPGRVFSRQQLLDALHADLRDVSDRAVDSH 195
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Match:
A0A4P5U691_9BURK (DNA-binding response regulator n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5U691_9BURK)
HSP 1 Score: 218 bits (555), Expect = 1.160e-68
Identity = 110/192 (57.29%), Postives = 141/192 (73.44%), Query Frame = 1
Query: 13 RKILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPLMMILDLNLPGLDGIGVCQAVREFSDLPILMLTARIDENDRLLGLDSGADDYVCKPFSPLEVMARVRAAVRRVDGQLKTSL----WKIDDAAQIIRWQDQPLDLTTVEFRMLSSLLQQPGRVFSRTQLLDKVHEDQRSVSDRAIDSH 576
R IL+VEDD+KIA +L +YL + GF +G AV V P +++LDL LPGLDGI VC AVR FS +PI+MLTAR+DE DRLLGLD+GADDYVCKPFSP EV+AR++A +RR +G+L T L + +D+ Q I W+ PL LT +EFR++ L+ +PG+VF+R +LLD VHED R VSDRAIDSH
Sbjct: 17 RTILIVEDDLKIADMLANYLHMHGFATAQCGNGLDAVTSVREQAPALILLDLMLPGLDGISVCSAVRAFSAVPIIMLTARVDEIDRLLGLDTGADDYVCKPFSPREVVARIKALLRRSEGRLATGLAPAAFALDEGRQQILWRGLPLPLTPLEFRLMRLLMSRPGQVFARARLLDTVHEDLRDVSDRAIDSH 208
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98762.23985.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 5.01e-81 / Id = 64.43 Expect = 1.44e-76 / Id = 61.34 Expect = 1.67e-73 / Id = 60.32 Expect = 5.94e-73 / Id = 60.32 Expect = 1.87e-72 / Id = 57.73 Expect = 8.21e-71 / Id = 59.04 Expect = 3.77e-70 / Id = 60.11 Expect = 3.89e-70 / Id = 58.03 Expect = 1.38e-69 / Id = 59.26 Expect = 1.16e-68 / Id = 57.29 Sequence A0A7Y9U7S9_9BURK UPI001917AC3F A0A523QB79_9BURK A0A257EAJ2_9BURK A0A2M6VPW4_9BURK A0A4V1CIE7_9BURK A0A2T7UCH6_9BURK A0A3N5ESD8_9BURK A0A0N1KWI7_9PROT A0A4P5U691_9BURK Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig98762.23985.1
>prot_P-canaliculata_contig98762.23985.1 ID=prot_P-canaliculata_contig98762.23985.1|Name=mRNA_P-canaliculata_contig98762.23985.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=192bp
MKSSRKILVVEDDVKIAQVLLDYLRVEGFEALSISDGRQAVHYVERTPPL back to top mRNA from alignment at P-canaliculata_contig98762:2..577-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig98762.23985.1 ID=mRNA_P-canaliculata_contig98762.23985.1|Name=mRNA_P-canaliculata_contig98762.23985.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=576bp|location=Sequence derived from alignment at P-canaliculata_contig98762:2..577- (Pelvetia canaliculata dioecious)ATGAAGTCGTCTAGAAAGATTCTGGTTGTTGAAGATGACGTTAAGATAGC
TCAGGTATTGCTTGACTACCTGCGTGTGGAAGGATTCGAAGCATTGTCTA
TCAGTGATGGCAGACAGGCTGTGCATTATGTGGAGCGAACTCCACCGCTC
ATGATGATTCTGGATTTGAATCTGCCGGGTCTGGATGGTATCGGTGTGTG
CCAGGCAGTCCGGGAATTCAGTGATCTACCCATACTGATGCTCACCGCAA
GAATTGATGAGAACGATCGCCTGCTGGGACTGGACAGCGGGGCAGACGAT
TATGTGTGCAAGCCGTTCAGCCCGCTGGAAGTGATGGCGCGAGTCAGGGC
GGCGGTGCGTCGCGTGGACGGGCAATTGAAAACCAGTTTGTGGAAAATCG
ACGATGCCGCCCAGATTATCCGATGGCAGGATCAGCCGCTGGATCTGACA
ACGGTTGAATTCCGCATGCTGTCGTCGCTGTTACAGCAACCGGGTCGCGT
GTTTTCAAGAACGCAGTTGCTCGATAAGGTGCATGAAGACCAGCGTAGCG
TCAGCGACCGGGCCATTGATAGCCAC back to top Coding sequence (CDS) from alignment at P-canaliculata_contig98762:2..577-
>mRNA_P-canaliculata_contig98762.23985.1 ID=mRNA_P-canaliculata_contig98762.23985.1|Name=mRNA_P-canaliculata_contig98762.23985.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at P-canaliculata_contig98762:2..577- (Pelvetia canaliculata dioecious) back to top