mRNA_P-canaliculata_contig9847.23952.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: D7FQ79_ECTSI (Possible haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ79_ECTSI) HSP 1 Score: 437 bits (1125), Expect = 3.430e-150 Identity = 210/276 (76.09%), Postives = 242/276 (87.68%), Query Frame = 1 Query: 1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLFAL 828 DG ALPGAVECLEELR +GKRLV+LSNTSKRE FTM RLPKFGFRR+LFDGGVTSGEEGYQHL ++GLVGGKA+LLGWNGED+DG L A+SL YSS +EATFLLCHGPD IVDDTG TRT TRN+G +EPYEA+ + A++RD+PMYNVNPD +VNNPQGG W+MPG+++K+YE MGGRV YFGKPHKEH++ AV+KMGL D VVHVGDSLAHDI GA++AGLDSVFIAGGI GEELG+DAKA + F LSP L++ F RENVTPT+TMPLFAL Sbjct: 38 DGRDALPGAVECLEELRSQGKRLVILSNTSKREDFTMARLPKFGFRRELFDGGVTSGEEGYQHLVQNGLVGGKAVLLGWNGEDSDGLLAALSLDYSSPKEATFLLCHGPDNIVDDTGATRTDTRNTGKVEPYEAVFQAAIERDLPMYNVNPDITVNNPQGGLWHMPGLLAKRYEAMGGRVTYFGKPHKEHYDTAVEKMGLGNDRVVHVGDSLAHDIVGASSAGLDSVFIAGGICGEELGIDAKADKSTFNLSPDALERAFSRENVTPTWTMPLFAL 313
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A8J9WZI5_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WZI5_PHATR) HSP 1 Score: 198 bits (503), Expect = 9.520e-57 Identity = 123/290 (42.41%), Postives = 161/290 (55.52%), Query Frame = 1 Query: 1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDGFLEAMSLKYSSV------REATFLLCHG--------PDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLFAL 828 +GE L GA EC+E L R+GK+L++LSN+S T RLPK GF RD F G VTSGEE H + G K + L W T + + KY +V EA F+L HG PD +T +G+LE + +L+ +DR IPM NPDF P G MPG I+++YE++GG V FGKPHKEHFEA V+ +GL K+ VVHVGDS+ HDI GA A G+ S+ + GG+ EELG++ G P L++LF TPT +PL L Sbjct: 14 NGEHGLEGAPECVEALARQGKKLIILSNSSSLAKDTSARLPKLGFDRDAFVGAVTSGEEA-SHYIQETYAGKKCLFLTWKSPKTPSPVSVLQ-KYGNVSISDNVEEADFILLHGCEVMRGPGPDGEASETDLGH--FMETGNLEIVDKILKPCLDRMIPMVCANPDFIYVKPDGDVASMPGKIAERYEQLGGSVTSFGKPHKEHFEACVRDLGLPKEKVVHVGDSIYHDIAGANATGISSILVVGGVHREELGIEV--GSLPER---DALEQLFHTHGETPTHVVPLLKL 294
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S2V2E7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2E7_9STRA) HSP 1 Score: 187 bits (476), Expect = 4.310e-53 Identity = 106/265 (40.00%), Postives = 158/265 (59.62%), Query Frame = 1 Query: 67 LVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNG-EDTDG-FLEAMSLKYSSVRE-ATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDN---------VVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGV-DAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLF 822 +++LSN+SKR FT+ RL KFGF F G VTSGEE Q++ R+GLVG KA++ W D F + + +++S E A ++LCHG I G T T + G ++ YE LL+ A ++ + M NPDF+V P G YMPG+++++Y+E+GG + FGKP HF+A ++ +G ++D ++HVGDSL HDI GAA AG+DS+FI GGI +L + DA E++P +L L + P+++ LF Sbjct: 1 MIILSNSSKRSNFTIDRLGKFGFDSSAFSGAVTSGEEALQYIQRNGLVGQKALVFSWEDFRQADAPFFDQVQPEFASPAEGARYILCHGSQVISTALGDTSTRLQQEGIVDDYEDLLKDAAEKGLLMVVANPDFTVKKPDGSTAYMPGLLARRYQELGGPLVTFGKPGVSHFQACIRMLGQQQDGEGQPILPDRIIHVGDSLHHDIQGAADAGIDSLFIGGGIHSADLQLSDAPHELSSAEINPSSLVTLCSKYTSEPSWSSTLF 265
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S0EVJ0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EVJ0_9CRYP) HSP 1 Score: 186 bits (472), Expect = 3.410e-51 Identity = 109/282 (38.65%), Postives = 159/282 (56.38%), Query Frame = 1 Query: 1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGE--DTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTT--RTGTRNSGSLE-PYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLE--KDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDA-KAGRPPFELSPKTLDKLFVRENVTPTFTMPLF 822 +G + LPGA+EC L + GK++ +LSNTS+R K+L GF + + +TSGEE ++H+ S + G + L W E D D FL+ +++ S V A F+LCHG + +V D T+ T G + Y LL+ A+ R + M N D+S P G +MPG+I ++Y+ MGG+V +FGKPH EHF+A +K G + VVHVGDSL HDI GA A +DSVFI GG+ +++G+ G E + +DKL E P + + F Sbjct: 96 NGAIPLPGALECFNALNKAGKKIAILSNTSRRSKDAFKKLRALGFELESEESVITSGEECWKHMKES-MDGKSCVYLTWKREIEDADKFLDGLNISTSDVSSADFILCHGSEIVVGDPSTSPGETDFIKHGDVSLSYNQLLKAALKRGLQMLVANADYSAVLPDGSLGHMPGLIGQQYQLMGGKVKWFGKPHPEHFQACLKTFGKDVLPTRVVHVGDSLDHDIQGAMDANIDSVFILGGVHAQDVGLRVGNDGSLSGETDEEKVDKLLTDEGYYPKWILEQF 376
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A1Z5JT37_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT37_FISSO) HSP 1 Score: 182 bits (462), Expect = 1.650e-50 Identity = 113/276 (40.94%), Postives = 161/276 (58.33%), Query Frame = 1 Query: 1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGE-DTDGFLEAMSLKY-SSVREATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLF 822 DG L GA + + L+ +GK+L++LSN+SK FT+++LP+FG F VTSG+E ++ R A+ L W+ + D D FL+A + + V +A F+L HG + T +G L E LL+ V+ +PM NPDF + G YMPG I+++YEE+GG+V FGKP+KEHF+A ++++ L + VVHVGDSL HDI GA AAGLDS+F+AGG+ EL D G P S ++ +LF R PT +PLF Sbjct: 36 DGTKGLVGAADAVRSLKARGKKLIILSNSSKLTDFTLQKLPQFGLEPSDFVHAVTSGQEACAYV-RQHHFQQPALFLTWSSQSDADVFLQACGIPVVTRVEDAKFILLHGARRLYG-TDLDLEQCYMTGDLTVVEPLLKKCVEHQLPMICANPDFVMVRTDGRLVYMPGTIAQRYEELGGKVTSFGKPNKEHFQACLRELELPAEKVVHVGDSLHHDIMGANAAGLDSIFVAGGVHRHEL--DNLPGEVP---SRESCLELFERHGQFPTHVVPLF 304
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A0G4G895_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G895_9ALVE) HSP 1 Score: 187 bits (475), Expect = 1.950e-50 Identity = 105/240 (43.75%), Postives = 145/240 (60.42%), Query Frame = 1 Query: 1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTTRTGT---RNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEE 711 +G LPGA++CLE L++ GK++V+LSN+S++ + L K GF D+F G VTSGEE +L R G A + W G ++D F+EA +K + EA L+ G + I + + T R +G L+ + L+ V+R IP+ NPDF V P G +MPGVI+ YE++GG+V FGKP K HFEA+V+ + L + VVHVGDSL HDI GA AGL S+FIA GI E Sbjct: 30 NGAYPLPGALDCLERLQKAGKKMVILSNSSRKAFDCINGLKKLGFDVDVFVGAVTSGEEASTYL-RDNFSGKIATWMRWEGRESDPFIEAAEVKIGPIEEAEVLVLQGVEIISEGSDRPLTSAPCFRRTGDLKDHMPFLKKGVERGIPLVCANPDFQVLEPSGSRAFMPGVIAAAYEKLGGKVLRFGKPGKTHFEASVRMLELPPERVVHVGDSLEHDIAGACGAGLASIFIAEGIHKHE 268
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S0C8U6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8U6_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.790e-49 Identity = 109/295 (36.95%), Postives = 157/295 (53.22%), Query Frame = 1 Query: 1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDGFLEAMSLKYS----------SVREATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPY---------EALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLFAL 828 +G LPGA EC+E+L + K+ ++LSNTS T+ +LPK GF F+G VTSGEE H++++ K + W T L+ ++ S S+ +A F++ HG I G+ + G SL + + +L R++PM NPDF + P G +MPG I ++YE MGG+ YFGKPH HFEA ++ +GL+++ V HVGDSL HD+ GA +G+ S+F+ GGI E+LG P E L KLF +E TPT +PL L Sbjct: 35 NGSCGLPGAPECVEKLAAQNKKFIILSNTSSSSKATIAKLPKLGFDPINFEGAVTSGEEAGLHVSKA-YQSKKVLWFTWANGATPSPLDFLARCGSGDSRGIEVADSIEDADFIIAHGCGVI---RGSGKDGEAKETSLGSFHENGDFSVLDPVLEQCAKRNLPMVCANPDFIMVKPDGSKGHMPGKIGQRYESMGGKCEYFGKPHVPHFEACLRDLGLDRNRVAHVGDSLHHDVAGANNSGIASIFVTGGIHREDLGSPELGTLPTNE----ALQKLFKKEGQTPTHVIPLLRL 321
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: L1JPQ0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPQ0_GUITC) HSP 1 Score: 182 bits (461), Expect = 2.630e-48 Identity = 110/282 (39.01%), Postives = 165/282 (58.51%), Query Frame = 1 Query: 1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGE--DTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTT--RTGTRNSGS-LEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMG--LEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDA-KAGRPPFELSPKTLDKLFVRENVTPTFTMPLF 822 +G + LPGA+EC E L++ GKR+ +LSNTS+R +K+L GF+ D + +TSGEE ++H+ + G + L W E D D FL+ +++ S V A F+LCHG + IV+++ ++ TG G+ L Y+ +L VA++R + M N D+ N +I ++Y+ MGG+V +FGKPH EHF+A +K G ++ VVHVGDSL HDI GAA A LDSVFI GG+ +E+G+ K G E + ++KL E P + + F Sbjct: 39 NGAIPLPGALECFESLKKAGKRIAILSNTSRRSKDALKKLRALGFQLDSEESVITSGEECWKHMNER-MNGKSCVYLTWKREVEDDDKFLDGLNISTSDVSTADFILCHGSEIIVENSSSSPVETGFIEHGNVLLAYQKVLAVALNRGLEMLVANADYRHANNSSNQ---TSLIGQQYQLMGGKVKWFGKPHSEHFQACLKTFGEDIKYTRVVHVGDSLDHDIQGAADANLDSVFILGGVHAQEVGLTTGKDGLTTGEQDEEKINKLLADEGCHPKWILEKF 316
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S4N208_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N208_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.250e-47 Identity = 115/304 (37.83%), Postives = 164/304 (53.95%), Query Frame = 1 Query: 28 VECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGG------------KAMLLGWNGEDTDGFLEAMSL--------KYSSVREATFLLCHGPDTI----VD-DTGTTRTGT-RNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDN---VVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEEL-GVDAKAGRPPFELSP-------KTLDKLFVRENVTPTFTMPLFAL 828 VEC+ L GKRLV+LSNTS +++L K GF F+G VTSGEE +H+ + GG KA W+ ++ D ++ SSV EA F+L HG + VD + T G+ + +G L E L+V ++RD+PM NPDF V G +MPG I+++YEEMGG+V FGKPH HFEA ++++G ++ VVHVGDSL HD+ GA AAG+D VF+ GGI ++L G+ + E++P + L LF RE + P +P+F + Sbjct: 1 VECVSYLASMGKRLVILSNTSSPADSALRKLSKMGFDPAHFEGAVTSGEEASRHVRETYGSGGGAEEKSKQRRNSKAFWFTWSADNPDATAHPLAFLGRCGHVTPASSVDEADFVLVHGTQVVRGPGVDGEASVTPLGSFKENGDLSLVEPYLQVCLNRDLPMVCCNPDFVVKLSSGDLAHMPGKIARRYEEMGGKVASFGKPHVSHFEACLRELGAAENGRSRVVHVGDSLHHDVAGANAAGIDCVFVTGGIHHDDLMGLGESMTKAEREMTPVGIMPEKEALAALFKREGIVPKLVVPMFQM 304
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S4D550_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D550_HETAK) HSP 1 Score: 174 bits (442), Expect = 5.710e-47 Identity = 119/283 (42.05%), Postives = 162/283 (57.24%), Query Frame = 1 Query: 1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHL---ARSGL--VGGKAMLLGWNGEDTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEA---AVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENV-TPTFTMPLF 822 +G A GA+E +E L ++GKRLV+LSN+SKR+ +K L K GF D F G VTSG+ Y+ + AR +G + ++ G N +D +L M + S++ EA FLL G I+D TT+ R+ S A+L A R +P+ NPD + P G MPGVI K+YE+MGG VHY GKPH +E A+++ G +D V VGDSL HDI GA+ AG++S+FI GGI EELG+ P S K L+KL+ R PT +MP F Sbjct: 85 NGTHAYQGAIEAVERLAQRGKRLVILSNSSKRKKTGVKNLRKMGFNPDHFCGFVTSGDTVYEEMISRAREPFKSLGTRCVVFG-NADDDKAYLSEMQCELSTIEEADFLLARGNFVILDAVETTKCD-RSLESEARVAAVLAAAAARGLPLLVANPDIA--RPGCGS-PMPGVIGKQYEDMGGTVHYTGKPHSSVYELCFQALEEDGGNRDRVCAVGDSLDHDILGASRAGIESIFIIGGIHSEELGIKEGGRECP---SQKALEKLYARHGGGVPTHSMPAF 359 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9847.23952.1 >prot_P-canaliculata_contig9847.23952.1 ID=prot_P-canaliculata_contig9847.23952.1|Name=mRNA_P-canaliculata_contig9847.23952.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=241bp MKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDGback to top mRNA from alignment at P-canaliculata_contig9847:899..3829+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9847.23952.1 ID=mRNA_P-canaliculata_contig9847.23952.1|Name=mRNA_P-canaliculata_contig9847.23952.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2931bp|location=Sequence derived from alignment at P-canaliculata_contig9847:899..3829+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9847:899..3829+ >mRNA_P-canaliculata_contig9847.23952.1 ID=mRNA_P-canaliculata_contig9847.23952.1|Name=mRNA_P-canaliculata_contig9847.23952.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1446bp|location=Sequence derived from alignment at P-canaliculata_contig9847:899..3829+ (Pelvetia canaliculata dioecious)back to top |