mRNA_P-canaliculata_contig98469.23951.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: D7FKU0_ECTSI (Putative serine rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU0_ECTSI) HSP 1 Score: 105 bits (263), Expect = 6.620e-25 Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 1 Query: 1 QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGGPGLSRFFERPS 186 +V+RTAQYGCNCRG GGNGGCGEFDI++AVIG ++DM+FT VYDFKG G PG ++F RPS Sbjct: 598 KVVRTAQYGCNCRGAGGNGGCGEFDIVEAVIGVDHADMMFTTVYDFKGTGAPGHGKYFNRPS 659
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: D8LG92_ECTSI (F5/8 type C domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG92_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 1.190e-16 Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 1 Query: 4 VLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFT 123 +LRTAQYGCNCRG GGNGGCGEFDI++ ++GN YSDMLFT Sbjct: 489 ILRTAQYGCNCRGAGGNGGCGEFDIIEGIVGNKYSDMLFT 528
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: A0A1X6MZQ9_9APHY (Uncharacterized protein n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6MZQ9_9APHY) HSP 1 Score: 79.7 bits (195), Expect = 6.780e-16 Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 1 QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGGPGLSRFFERPSVSDI 198 QV+R AQYGCNCRG GGNGGCGE DIL+ + G+ D + +Y FKGA G G S F RP+ D+ Sbjct: 228 QVVRAAQYGCNCRGEGGNGGCGELDILEVIAGSDI-DNAISEIYSFKGATGSGASAF-PRPTGDDV 291
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: A0A165D0F9_9APHY (Uncharacterized protein n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165D0F9_9APHY) HSP 1 Score: 79.3 bits (194), Expect = 8.120e-16 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 1 QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGGPGLSRFFERPSVS 192 QV+R AQYGCNCRG GG+GGCGE D+L+ V+ N + + +Y FKGA G G + +F RP+ S Sbjct: 204 QVVRAAQYGCNCRGEGGDGGCGELDVLE-VLANSDTTQAISEIYSFKGATGTGSAEYFARPTSS 266
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: A0A2R6NVP8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NVP8_9APHY) HSP 1 Score: 79.3 bits (194), Expect = 9.370e-16 Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 1 QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGGPGLSRFFERPS--------VSDIHTRMLLVV 222 QV+R AQYGCNCRGMGG+GGCGE DI + ++ N S + +Y FKGA G G +F RP + DI T + +V Sbjct: 232 QVVRAAQYGCNCRGMGGDGGCGEIDIAETLVAN--SPQAISELYSFKGATGTGDGNYFPRPDNGRDTLAVIFDIKTDAISIV 311
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: A0A371D7V1_9APHY (Uncharacterized protein n=2 Tax=Polyporus TaxID=5637 RepID=A0A371D7V1_9APHY) HSP 1 Score: 78.2 bits (191), Expect = 2.460e-15 Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 1 QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGGPGLSRFFERPSVSDIHTRMLL 216 QV+RTA+YGCNCRG+G GGCGE DIL+ +IG ++ + + +Y FKGA G G + FF RP+ + ++L Sbjct: 230 QVVRTAEYGCNCRGIGSPGGCGELDILETLIGADPNNGI-SEIYSFKGATGSGNNNFFARPTGDKVTYAVVL 300
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: A0A0C3NUK6_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3NUK6_PHLGI) HSP 1 Score: 77.8 bits (190), Expect = 3.400e-15 Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 1 QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGGPGLSRFFERPSVSDIHT 204 QV+R AQYGCNCRG+GG+GGCGE DI + ++ N S + +Y FKGA G G +F RP+ T Sbjct: 232 QVVRAAQYGCNCRGVGGDGGCGEIDIAETLVAN--SVQAVSEIYSFKGATGSGDGNYFARPAAGAAAT 297
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: A0A5C2S7Z1_9APHY (Uncharacterized protein n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2S7Z1_9APHY) HSP 1 Score: 77.4 bits (189), Expect = 4.670e-15 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 1 QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGGPGLSRFFERPS 186 Q++R+AQYGCNCRG+G GGCGE DIL+ ++G ++ + + +Y FKGA G G S FF RP+ Sbjct: 230 QIVRSAQYGCNCRGVGSPGGCGELDILETLVGADPNNGV-SEIYSFKGATGSGNSNFFARPT 290
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: A0A401GFD8_9APHY (Cell wall protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GFD8_9APHY) HSP 1 Score: 76.6 bits (187), Expect = 9.090e-15 Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 1 Query: 1 QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGGPGLSRFFERPSVSDIHT 204 QV+R AQYGCNCRGMGGNGGCGE DIL+ + G+ + + + +Y F GA G G F RPS + +T Sbjct: 232 QVVRAAQYGCNCRGMGGNGGCGELDILEVLSGSSPNQAI-SELYSFMGATGSG-GESFARPSSASTYT 297
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Match: A0A165PHX7_9AGAM (Uncharacterized protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165PHX7_9AGAM) HSP 1 Score: 76.6 bits (187), Expect = 9.180e-15 Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 1 QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGGPGLSRFFERPS 186 Q++R+AQYGCNCRG+G +GGCGE D+++ + G + + + VY FKGA G G S +F RP+ Sbjct: 231 QIVRSAQYGCNCRGVGADGGCGELDVVEVISGQDQNQGI-SEVYSFKGATGTGSSAYFTRPT 291 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98469.23951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig98469.23951.1 >prot_P-canaliculata_contig98469.23951.1 ID=prot_P-canaliculata_contig98469.23951.1|Name=mRNA_P-canaliculata_contig98469.23951.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=75bp QVLRTAQYGCNCRGMGGNGGCGEFDILKAVIGNPYSDMLFTHVYDFKGAGback to top mRNA from alignment at P-canaliculata_contig98469:719..943- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig98469.23951.1 ID=mRNA_P-canaliculata_contig98469.23951.1|Name=mRNA_P-canaliculata_contig98469.23951.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=225bp|location=Sequence derived from alignment at P-canaliculata_contig98469:719..943- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig98469:719..943- >mRNA_P-canaliculata_contig98469.23951.1 ID=mRNA_P-canaliculata_contig98469.23951.1|Name=mRNA_P-canaliculata_contig98469.23951.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=450bp|location=Sequence derived from alignment at P-canaliculata_contig98469:719..943- (Pelvetia canaliculata dioecious)back to top |